RNA–Protein interactions for RNA: ENST00000620847.1

GDNF-208, Transcript of glial cell derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene GDNF, Length 3,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDNF-208ENST00000620847 CASC1Q6TDU7 716 aa9.96□□□□□ -0.82
GDNF-208ENST00000620847 F6X3S4 739 aa9.95□□□□□ -0.82
GDNF-208ENST00000620847 HTATSF1O43719 755 aaKnown RBP9.95□□□□□ -0.82
GDNF-208ENST00000620847 NWD1Q149M9 1564 aa9.95□□□□□ -0.82
GDNF-208ENST00000620847 APBB1O00213 710 aa9.95□□□□□ -0.82
GDNF-208ENST00000620847 TBX22Q9Y458 520 aa9.95□□□□□ -0.82
GDNF-208ENST00000620847 EID1Q9Y6B2 187 aa9.95□□□□□ -0.82
GDNF-208ENST00000620847 CCDC173Q0VFZ6 552 aa9.94□□□□□ -0.82
GDNF-208ENST00000620847 KIAA1211Q6ZU35 1233 aa9.94□□□□□ -0.82
GDNF-208ENST00000620847 SLC4A10Q6U841 1118 aa9.94□□□□□ -0.82
GDNF-208ENST00000620847 GAS2L3Q86XJ1 694 aa9.94□□□□□ -0.82
GDNF-208ENST00000620847 GOLGA6L22H0YM25 854 aa9.94□□□□□ -0.82
GDNF-208ENST00000620847 REC8O95072 547 aa9.94□□□□□ -0.82
GDNF-208ENST00000620847 BAG4O95429 457 aaKnown RBP9.94□□□□□ -0.82
GDNF-208ENST00000620847 CYP2E1P05181 493 aaPredicted RBP9.94□□□□□ -0.82
GDNF-208ENST00000620847 AMPHP49418 695 aa9.94□□□□□ -0.82
GDNF-208ENST00000620847 PDE1AP54750 535 aa9.94□□□□□ -0.82
GDNF-208ENST00000620847 SALL3Q9BXA9 1300 aa9.93□□□□□ -0.82
GDNF-208ENST00000620847 GNAI2P04899 355 aa9.93□□□□□ -0.82
GDNF-208ENST00000620847 MSNP26038 577 aaKnown RBP9.93□□□□□ -0.82
GDNF-208ENST00000620847 NGDNQ8NEJ9 315 aaKnown RBP9.93□□□□□ -0.82
GDNF-208ENST00000620847 ERC2O15083 957 aa9.93□□□□□ -0.82
GDNF-208ENST00000620847 CEBPAP49715 358 aaPredicted RBP9.93□□□□□ -0.82
GDNF-208ENST00000620847 NUCB2P80303 420 aa9.93□□□□□ -0.82
GDNF-208ENST00000620847 ZSCAN30Q86W11 494 aa9.93□□□□□ -0.82
GDNF-208ENST00000620847 STK31Q9BXU1 1019 aa9.93□□□□□ -0.82
GDNF-208ENST00000620847 ANKARQ7Z5J8 1434 aa9.92□□□□□ -0.82
GDNF-208ENST00000620847 IBTKQ9P2D0 1353 aaPredicted RBP9.92□□□□□ -0.82
GDNF-208ENST00000620847 GNAT3A8MTJ3 354 aa9.92□□□□□ -0.82
GDNF-208ENST00000620847 ST18O60284 1047 aa9.92□□□□□ -0.82
GDNF-208ENST00000620847 FLIIQ13045 1269 aa9.92□□□□□ -0.82
GDNF-208ENST00000620847 KLHL40Q2TBA0 621 aa9.92□□□□□ -0.82
GDNF-208ENST00000620847 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.92□□□□□ -0.82
GDNF-208ENST00000620847 CWC22Q9HCG8 908 aaKnown RBP9.92□□□□□ -0.82
GDNF-208ENST00000620847 PXDNLA1KZ92 1463 aa9.92□□□□□ -0.82
GDNF-208ENST00000620847 SOS1Q07889 1333 aaPredicted RBP9.92□□□□□ -0.82
GDNF-208ENST00000620847 CCDC30Q5VVM6 783 aa9.92□□□□□ -0.82
GDNF-208ENST00000620847 HOXC9P31274 260 aa9.91□□□□□ -0.82
GDNF-208ENST00000620847 NASPP49321 788 aaPredicted RBP9.91□□□□□ -0.82
GDNF-208ENST00000620847 GNAI3P08754 354 aa9.91□□□□□ -0.82
GDNF-208ENST00000620847 EXOC6BQ9Y2D4 811 aa9.91□□□□□ -0.82
GDNF-208ENST00000620847 MAP3K5Q99683 1374 aa9.91□□□□□ -0.82
GDNF-208ENST00000620847 OFD1O75665 1012 aa9.9□□□□□ -0.82
GDNF-208ENST00000620847 TERF1P54274 439 aa9.9□□□□□ -0.82
GDNF-208ENST00000620847 ATP8B2P98198 1209 aa9.9□□□□□ -0.82
GDNF-208ENST00000620847 MAP7D2Q96T17 732 aa9.9□□□□□ -0.82
GDNF-208ENST00000620847 BABAM1Q9NWV8 329 aa9.9□□□□□ -0.82
GDNF-208ENST00000620847 FER1L4A9Z1Z3 1794 aa9.9□□□□□ -0.82
GDNF-208ENST00000620847 NLRP6P59044 892 aa9.9□□□□□ -0.82
GDNF-208ENST00000620847 FKBP5Q13451 457 aaPredicted RBP9.9□□□□□ -0.82
GDNF-208ENST00000620847 PPP1R9BQ96SB3 815 aa9.9□□□□□ -0.82
GDNF-208ENST00000620847 LRRCC1Q9C099 1032 aa9.9□□□□□ -0.82
GDNF-208ENST00000620847 LTN1O94822 1766 aa9.9□□□□□ -0.82
GDNF-208ENST00000620847 PNMA6EA0A0J9YXQ4 647 aa9.9□□□□□ -0.83
GDNF-208ENST00000620847 PKP1Q13835 747 aa9.9□□□□□ -0.83
GDNF-208ENST00000620847 IL17REQ8NFR9 667 aa9.9□□□□□ -0.83
GDNF-208ENST00000620847 DDX49Q9Y6V7 483 aaKnown RBP9.89□□□□□ -0.83
GDNF-208ENST00000620847 MX1P20591 662 aa9.89□□□□□ -0.83
GDNF-208ENST00000620847 ZGPATQ8N5A5 531 aaKnown RBP9.89□□□□□ -0.83
GDNF-208ENST00000620847 ESYT1Q9BSJ8 1104 aa9.89□□□□□ -0.83
GDNF-208ENST00000620847 LMBRD1Q9NUN5 540 aa9.89□□□□□ -0.83
GDNF-208ENST00000620847 TAF7Q15545 349 aaPredicted RBP9.88□□□□□ -0.83
GDNF-208ENST00000620847 TSHZ3Q63HK5 1081 aa9.88□□□□□ -0.83
GDNF-208ENST00000620847 MCTP1Q6DN14 999 aa9.88□□□□□ -0.83
GDNF-208ENST00000620847 STAP2Q9UGK3 403 aa9.88□□□□□ -0.83
GDNF-208ENST00000620847 ZDHHC9Q9Y397 364 aa9.88□□□□□ -0.83
GDNF-208ENST00000620847 MED1Q15648 1581 aaPredicted RBP9.88□□□□□ -0.83
GDNF-208ENST00000620847 NECTIN2Q92692 538 aa9.88□□□□□ -0.83
GDNF-208ENST00000620847 USP44Q9H0E7 712 aa9.88□□□□□ -0.83
GDNF-208ENST00000620847 KDM3BQ7LBC6 1761 aa9.88□□□□□ -0.83
GDNF-208ENST00000620847 THEMISQ8N1K5 641 aaPredicted RBP9.87□□□□□ -0.83
GDNF-208ENST00000620847 IL17RAQ96F46 866 aa9.87□□□□□ -0.83
GDNF-208ENST00000620847 LRRFIP2Q9Y608 721 aaKnown RBP9.87□□□□□ -0.83
GDNF-208ENST00000620847 CHMLP26374 656 aa9.87□□□□□ -0.83
GDNF-208ENST00000620847 ZNF445P59923 1031 aa9.87□□□□□ -0.83
GDNF-208ENST00000620847 NUTM2GQ5VZR2 741 aa9.87□□□□□ -0.83
GDNF-208ENST00000620847 SRCIN1Q9C0H9 1055 aa9.87□□□□□ -0.83
GDNF-208ENST00000620847 AOX1Q06278 1338 aa9.87□□□□□ -0.83
GDNF-208ENST00000620847 CEMIPQ8WUJ3 1361 aa9.86□□□□□ -0.83
GDNF-208ENST00000620847 HS1BP3Q53T59 392 aa9.86□□□□□ -0.83
GDNF-208ENST00000620847 KCNA6P17658 529 aa9.86□□□□□ -0.83
GDNF-208ENST00000620847 MCM2P49736 904 aa9.86□□□□□ -0.83
GDNF-208ENST00000620847 NEK4P51957 841 aa9.86□□□□□ -0.83
GDNF-208ENST00000620847 ANAPC15P60006 121 aa9.86□□□□□ -0.83
GDNF-208ENST00000620847 ABTB2Q8N961 1025 aa9.86□□□□□ -0.83
GDNF-208ENST00000620847 SSH3Q8TE77 659 aa9.86□□□□□ -0.83
GDNF-208ENST00000620847 RBM10P98175 930 aaKnown RBP9.86□□□□□ -0.83
GDNF-208ENST00000620847 TMX3Q96JJ7 454 aa9.86□□□□□ -0.83
GDNF-208ENST00000620847 FAM13BQ9NYF5 915 aa9.86□□□□□ -0.83
GDNF-208ENST00000620847 PALD1Q9ULE6 856 aa9.85□□□□□ -0.83
GDNF-208ENST00000620847 R3HCC1Q9Y3T6 440 aaKnown RBP9.85□□□□□ -0.83
GDNF-208ENST00000620847 NFAT5O94916 1531 aa9.85□□□□□ -0.83
GDNF-208ENST00000620847 UBTFL1P0CB47 393 aaPredicted RBP9.85□□□□□ -0.83
GDNF-208ENST00000620847 MCCP23508 829 aa9.85□□□□□ -0.83
GDNF-208ENST00000620847 CUL4AQ13619 759 aa9.85□□□□□ -0.83
GDNF-208ENST00000620847 ZSCAN23Q3MJ62 389 aa9.85□□□□□ -0.83
GDNF-208ENST00000620847 PHAXQ9H814 394 aaKnown RBP9.85□□□□□ -0.83
GDNF-208ENST00000620847 LMO7Q8WWI1 1683 aa9.85□□□□□ -0.83
GDNF-208ENST00000620847 TRIM6-TRIM34B2RNG4 842 aa9.84□□□□□ -0.83
GDNF-208ENST00000620847 POLA2Q14181 598 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms