RNA–Protein interactions for RNA: ENST00000619368.4

RDM1-225, Transcript of RAD52 motif containing 1, humanhuman

TSL 1 (best)

Gene RDM1, Length 506 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDM1-225ENST00000619368 IGSF1Q8N6C5 1336 aa12.46□□□□□ -0.41
RDM1-225ENST00000619368 ZNF831Q5JPB2 1677 aa12.46□□□□□ -0.41
RDM1-225ENST00000619368 SSFA2P28290 1259 aa12.46□□□□□ -0.41
RDM1-225ENST00000619368 KIF13BQ9NQT8 1826 aa12.46□□□□□ -0.42
RDM1-225ENST00000619368 GNPATO15228 680 aa12.45□□□□□ -0.42
RDM1-225ENST00000619368 GIGYF1O75420 1035 aaPredicted RBP12.45□□□□□ -0.42
RDM1-225ENST00000619368 SLC4A9Q96Q91 983 aa12.45□□□□□ -0.42
RDM1-225ENST00000619368 WWC3Q9ULE0 1092 aa12.45□□□□□ -0.42
RDM1-225ENST00000619368 VIRMAQ69YN4 1812 aaKnown RBP12.44□□□□□ -0.42
RDM1-225ENST00000619368 N4BP2Q86UW6 1770 aaPredicted RBP12.44□□□□□ -0.42
RDM1-225ENST00000619368 ERVV-2B6SEH9 535 aa12.44□□□□□ -0.42
RDM1-225ENST00000619368 KDRP35968 1356 aa12.43□□□□□ -0.42
RDM1-225ENST00000619368 PLEKHG2Q9H7P9 1386 aa12.43□□□□□ -0.42
RDM1-225ENST00000619368 KIAA1551Q9HCM1 1747 aa12.43□□□□□ -0.42
RDM1-225ENST00000619368 AEBP1Q8IUX7 1158 aa12.43□□□□□ -0.42
RDM1-225ENST00000619368 KDM6AO15550 1401 aaPredicted RBP12.43□□□□□ -0.42
RDM1-225ENST00000619368 ATP10DQ9P241 1426 aa12.43□□□□□ -0.42
RDM1-225ENST00000619368 SCN11AQ9UI33 1791 aa12.43□□□□□ -0.42
RDM1-225ENST00000619368 C4AP0C0L4 1744 aa12.42□□□□□ -0.42
RDM1-225ENST00000619368 PLEKHO1Q53GL0 409 aaPredicted RBP12.42□□□□□ -0.42
RDM1-225ENST00000619368 ZNF530Q6P9A1 599 aaPredicted RBP12.42□□□□□ -0.42
RDM1-225ENST00000619368 DCAF5Q96JK2 942 aa12.42□□□□□ -0.42
RDM1-225ENST00000619368 RBM42Q9BTD8 480 aaKnown RBP12.42□□□□□ -0.42
RDM1-225ENST00000619368 HSP90AB1P08238 724 aaKnown RBP12.41□□□□□ -0.42
RDM1-225ENST00000619368 MMP10P09238 476 aa12.41□□□□□ -0.42
RDM1-225ENST00000619368 TRAPPC3LQ5T215 181 aa12.41□□□□□ -0.42
RDM1-225ENST00000619368 MORC1Q86VD1 984 aa12.41□□□□□ -0.42
RDM1-225ENST00000619368 BRCA1P38398 1863 aaKnown RBP12.4□□□□□ -0.42
RDM1-225ENST00000619368 CABP4P57796 275 aa12.4□□□□□ -0.42
RDM1-225ENST00000619368 AMOTQ4VCS5 1084 aa12.4□□□□□ -0.42
RDM1-225ENST00000619368 ARHGEF1Q92888 912 aaKnown RBP12.4□□□□□ -0.42
RDM1-225ENST00000619368 RTCBQ9Y3I0 505 aaKnown RBP12.4□□□□□ -0.42
RDM1-225ENST00000619368 ADCY9O60503 1353 aa12.4□□□□□ -0.42
RDM1-225ENST00000619368 CICQ96RK0 1608 aaPredicted RBP12.4□□□□□ -0.42
RDM1-225ENST00000619368 TJP1Q07157 1748 aa12.4□□□□□ -0.43
RDM1-225ENST00000619368 MTHFSP49914 203 aa12.39□□□□□ -0.43
RDM1-225ENST00000619368 RC3H1Q5TC82 1133 aaKnown RBP12.39□□□□□ -0.43
RDM1-225ENST00000619368 IFFO2Q5TF58 517 aa12.39□□□□□ -0.43
RDM1-225ENST00000619368 SULT6B1Q6IMI4 303 aa12.39□□□□□ -0.43
RDM1-225ENST00000619368 CCER1Q8TC90 406 aaPredicted RBP12.39□□□□□ -0.43
RDM1-225ENST00000619368 ZNF526Q8TF50 670 aaPredicted RBP12.39□□□□□ -0.43
RDM1-225ENST00000619368 CNTNAP4Q9C0A0 1308 aa12.38□□□□□ -0.43
RDM1-225ENST00000619368 RPS6KA4O75676 772 aa12.38□□□□□ -0.43
RDM1-225ENST00000619368 IL13P35225 146 aa12.38□□□□□ -0.43
RDM1-225ENST00000619368 NFATC2IPQ8NCF5 419 aa12.38□□□□□ -0.43
RDM1-225ENST00000619368 GPBP1L1Q9HC44 474 aaPredicted RBP12.38□□□□□ -0.43
RDM1-225ENST00000619368 CEP350Q5VT06 3117 aa12.38□□□□□ -0.43
RDM1-225ENST00000619368 PXDNLA1KZ92 1463 aa12.38□□□□□ -0.43
RDM1-225ENST00000619368 PTCD1O75127 700 aaKnown RBP12.37□□□□□ -0.43
RDM1-225ENST00000619368 GYS1P13807 737 aa12.37□□□□□ -0.43
RDM1-225ENST00000619368 ADRA2BP18089 450 aa12.37□□□□□ -0.43
RDM1-225ENST00000619368 AMER1Q5JTC6 1135 aaPredicted RBP12.37□□□□□ -0.43
RDM1-225ENST00000619368 C1orf141Q5JVX7 400 aa12.37□□□□□ -0.43
RDM1-225ENST00000619368 NLGN1Q8N2Q7 840 aa12.37□□□□□ -0.43
RDM1-225ENST00000619368 KNSTRNQ9Y448 316 aa12.37□□□□□ -0.43
RDM1-225ENST00000619368 A0A0G2JLW4 131 aa12.36□□□□□ -0.43
RDM1-225ENST00000619368 RFC4P35249 363 aa12.36□□□□□ -0.43
RDM1-225ENST00000619368 ADAMTS7Q9UKP4 1686 aa12.35□□□□□ -0.43
RDM1-225ENST00000619368 ARFGEF1Q9Y6D6 1849 aa12.35□□□□□ -0.43
RDM1-225ENST00000619368 TGFB2P61812 414 aa12.35□□□□□ -0.43
RDM1-225ENST00000619368 C10orf71Q711Q0 1435 aa12.35□□□□□ -0.43
RDM1-225ENST00000619368 DPEP1P16444 411 aa12.34□□□□□ -0.43
RDM1-225ENST00000619368 CRKLP46109 303 aaKnown RBP12.34□□□□□ -0.43
RDM1-225ENST00000619368 LGR6Q9HBX8 967 aa12.34□□□□□ -0.43
RDM1-225ENST00000619368 SRP68Q9UHB9 627 aaKnown RBP12.34□□□□□ -0.43
RDM1-225ENST00000619368 KIF7Q2M1P5 1343 aa12.34□□□□□ -0.43
RDM1-225ENST00000619368 AKAP4Q5JQC9 854 aa12.33□□□□□ -0.44
RDM1-225ENST00000619368 INTS5Q6P9B9 1019 aaKnown RBP12.33□□□□□ -0.44
RDM1-225ENST00000619368 CCDC87Q9NVE4 849 aa12.33□□□□□ -0.44
RDM1-225ENST00000619368 BCS1LQ9Y276 419 aa12.33□□□□□ -0.44
RDM1-225ENST00000619368 PARP3Q9Y6F1 533 aa12.33□□□□□ -0.44
RDM1-225ENST00000619368 AFDNP55196 1824 aaKnown RBP12.32□□□□□ -0.44
RDM1-225ENST00000619368 HMOX1P09601 288 aa12.32□□□□□ -0.44
RDM1-225ENST00000619368 KCNA3P22001 575 aa12.32□□□□□ -0.44
RDM1-225ENST00000619368 FKBP8Q14318 412 aa12.32□□□□□ -0.44
RDM1-225ENST00000619368 USP42Q9H9J4 1324 aaKnown RBP12.32□□□□□ -0.44
RDM1-225ENST00000619368 SBF1O95248 1867 aa12.31□□□□□ -0.44
RDM1-225ENST00000619368 KIF3CO14782 793 aa12.31□□□□□ -0.44
RDM1-225ENST00000619368 PER1O15534 1290 aaPredicted RBP12.31□□□□□ -0.44
RDM1-225ENST00000619368 DDR1Q08345 913 aa12.31□□□□□ -0.44
RDM1-225ENST00000619368 ARHGAP27Q6ZUM4 889 aa12.31□□□□□ -0.44
RDM1-225ENST00000619368 DNAJC10Q8IXB1 793 aa12.31□□□□□ -0.44
RDM1-225ENST00000619368 SLC52A2Q9HAB3 445 aa12.31□□□□□ -0.44
RDM1-225ENST00000619368 MRC1P22897 1456 aa12.3□□□□□ -0.44
RDM1-225ENST00000619368 RNMTO43148 476 aaKnown RBP12.3□□□□□ -0.44
RDM1-225ENST00000619368 FCHSD2O94868 740 aa12.3□□□□□ -0.44
RDM1-225ENST00000619368 SLC39A6Q13433 755 aa12.3□□□□□ -0.44
RDM1-225ENST00000619368 MTHFSDQ2M296 383 aaKnown RBP12.3□□□□□ -0.44
RDM1-225ENST00000619368 CC2D1BQ5T0F9 858 aaKnown RBP12.3□□□□□ -0.44
RDM1-225ENST00000619368 UBR2Q8IWV8 1755 aa12.3□□□□□ -0.44
RDM1-225ENST00000619368 KCPQ6ZWJ8 1503 aa12.29□□□□□ -0.44
RDM1-225ENST00000619368 HSPA6P17066 643 aa12.29□□□□□ -0.44
RDM1-225ENST00000619368 TM4SF1P30408 202 aa12.29□□□□□ -0.44
RDM1-225ENST00000619368 DIAPH1O60610 1272 aaKnown RBP12.28□□□□□ -0.44
RDM1-225ENST00000619368 CYP19A1P11511 503 aaPredicted RBP12.28□□□□□ -0.44
RDM1-225ENST00000619368 USPL1Q5W0Q7 1092 aa12.28□□□□□ -0.44
RDM1-225ENST00000619368 PIM2Q9P1W9 311 aa12.28□□□□□ -0.44
RDM1-225ENST00000619368 SOS1Q07889 1333 aaPredicted RBP12.28□□□□□ -0.44
RDM1-225ENST00000619368 CCDC88AQ3V6T2 1871 aa12.27□□□□□ -0.44
RDM1-225ENST00000619368 POLRMTO00411 1230 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms