RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 FLIIQ13045 1269 aa23.95■■□□□ 1.42
PSPC1-206ENST00000619300 HOXB7P09629 217 aa23.94■■□□□ 1.42
PSPC1-206ENST00000619300 TATP17735 454 aaPredicted RBP23.94■■□□□ 1.42
PSPC1-206ENST00000619300 CCT4P50991 539 aaKnown RBP23.94■■□□□ 1.42
PSPC1-206ENST00000619300 HDGFL1Q5TGJ6 251 aa23.94■■□□□ 1.42
PSPC1-206ENST00000619300 CHMP4AQ9BY43 222 aa23.94■■□□□ 1.42
PSPC1-206ENST00000619300 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.94■■□□□ 1.426e-7■■■■□ 19.6
PSPC1-206ENST00000619300 CRYBG1Q9Y4K1 1723 aa23.93■■□□□ 1.42
PSPC1-206ENST00000619300 F6X3S4 739 aa23.93■■□□□ 1.42
PSPC1-206ENST00000619300 KCNQ3O43525 872 aa23.93■■□□□ 1.42
PSPC1-206ENST00000619300 SLC4A10Q6U841 1118 aa23.92■■□□□ 1.42
PSPC1-206ENST00000619300 CHD1LQ86WJ1 897 aa23.92■■□□□ 1.42
PSPC1-206ENST00000619300 SPG7Q9UQ90 795 aa23.92■■□□□ 1.42
PSPC1-206ENST00000619300 FKBP5Q13451 457 aaPredicted RBP23.91■■□□□ 1.42
PSPC1-206ENST00000619300 RPAP2Q8IXW5 612 aaPredicted RBP23.9■■□□□ 1.42
PSPC1-206ENST00000619300 MEIS3Q99687 375 aa23.9■■□□□ 1.42
PSPC1-206ENST00000619300 PLEKHG2Q9H7P9 1386 aa23.9■■□□□ 1.42
PSPC1-206ENST00000619300 ANKRD44Q8N8A2 993 aa23.89■■□□□ 1.42
PSPC1-206ENST00000619300 PRDM11Q9NQV5 511 aa23.89■■□□□ 1.41
PSPC1-206ENST00000619300 KDM3BQ7LBC6 1761 aa23.88■■□□□ 1.41
PSPC1-206ENST00000619300 FAM208AQ9UK61 1670 aaKnown RBP23.88■■□□□ 1.41
PSPC1-206ENST00000619300 EIF2S2P20042 333 aaKnown RBP23.88■■□□□ 1.41
PSPC1-206ENST00000619300 ANKRD45Q5TZF3 282 aa23.88■■□□□ 1.41
PSPC1-206ENST00000619300 LNPKQ9C0E8 428 aa23.88■■□□□ 1.41
PSPC1-206ENST00000619300 PHKG2P15735 406 aa23.88■■□□□ 1.41
PSPC1-206ENST00000619300 NOP58Q9Y2X3 529 aaKnown RBP23.88■■□□□ 1.41
PSPC1-206ENST00000619300 ZBTB47Q9UFB7 747 aaPredicted RBP23.87■■□□□ 1.41
PSPC1-206ENST00000619300 MEGF6O75095 1541 aa23.87■■□□□ 1.41
PSPC1-206ENST00000619300 CEP85Q6P2H3 762 aa23.86■■□□□ 1.41
PSPC1-206ENST00000619300 DCTPP1Q9H773 170 aa23.86■■□□□ 1.41
PSPC1-206ENST00000619300 ERICH6Q7L0X2 663 aa23.86■■□□□ 1.41
PSPC1-206ENST00000619300 IFNL2Q8IZJ0 200 aa23.86■■□□□ 1.41
PSPC1-206ENST00000619300 ATP10DQ9P241 1426 aa23.85■■□□□ 1.41
PSPC1-206ENST00000619300 CACNA1FO60840 1977 aa23.85■■□□□ 1.41
PSPC1-206ENST00000619300 PHAXQ9H814 394 aaKnown RBP23.84■■□□□ 1.41
PSPC1-206ENST00000619300 HEG1Q9ULI3 1381 aa23.84■■□□□ 1.41
PSPC1-206ENST00000619300 ADAMTS7Q9UKP4 1686 aa23.84■■□□□ 1.41
PSPC1-206ENST00000619300 GIGYF1O75420 1035 aaPredicted RBP23.84■■□□□ 1.41
PSPC1-206ENST00000619300 CHPF2Q9P2E5 772 aa23.83■■□□□ 1.41
PSPC1-206ENST00000619300 WDR17Q8IZU2 1322 aa23.83■■□□□ 1.41
PSPC1-206ENST00000619300 SEC24BO95487 1268 aa23.83■■□□□ 1.4
PSPC1-206ENST00000619300 DDRGK1Q96HY6 314 aa23.83■■□□□ 1.4
PSPC1-206ENST00000619300 SLC52A2Q9HAB3 445 aa23.83■■□□□ 1.4
PSPC1-206ENST00000619300 KDM6AO15550 1401 aaPredicted RBP23.81■■□□□ 1.4
PSPC1-206ENST00000619300 CYP27B1O15528 508 aa23.81■■□□□ 1.4
PSPC1-206ENST00000619300 GNAI2P04899 355 aa23.81■■□□□ 1.4
PSPC1-206ENST00000619300 GNAI3P08754 354 aa23.81■■□□□ 1.4
PSPC1-206ENST00000619300 DCAF5Q96JK2 942 aa23.81■■□□□ 1.4
PSPC1-206ENST00000619300 DBF4Q9UBU7 674 aaPredicted RBP23.8■■□□□ 1.4
PSPC1-206ENST00000619300 HSP90AB1P08238 724 aaKnown RBP23.79■■□□□ 1.4
PSPC1-206ENST00000619300 TOM1L2Q6ZVM7 507 aa23.79■■□□□ 1.4
PSPC1-206ENST00000619300 NFATC2IPQ8NCF5 419 aa23.79■■□□□ 1.4
PSPC1-206ENST00000619300 ANP32EQ9BTT0 268 aa23.79■■□□□ 1.4
PSPC1-206ENST00000619300 VIRMAQ69YN4 1812 aaKnown RBP23.79■■□□□ 1.4
PSPC1-206ENST00000619300 PXDNLA1KZ92 1463 aa23.79■■□□□ 1.4
PSPC1-206ENST00000619300 HMMRO75330 724 aa23.78■■□□□ 1.4
PSPC1-206ENST00000619300 ZNF790Q6PG37 636 aa23.78■■□□□ 1.4
PSPC1-206ENST00000619300 SIPA1L3O60292 1781 aaPredicted RBP23.78■■□□□ 1.4
PSPC1-206ENST00000619300 NHSL1Q5SYE7 1610 aa23.77■■□□□ 1.4
PSPC1-206ENST00000619300 COL5A2P05997 1499 aaPredicted RBP23.77■■□□□ 1.4
PSPC1-206ENST00000619300 CARD10Q9BWT7 1032 aa23.76■■□□□ 1.39
PSPC1-206ENST00000619300 USP44Q9H0E7 712 aa23.76■■□□□ 1.39
PSPC1-206ENST00000619300 PRAMEF22A3QJZ6 481 aa23.75■■□□□ 1.39
PSPC1-206ENST00000619300 SLC39A6Q13433 755 aa23.75■■□□□ 1.39
PSPC1-206ENST00000619300 SCN11AQ9UI33 1791 aa23.74■■□□□ 1.39
PSPC1-206ENST00000619300 PI4KAP2A4QPH2 592 aa23.74■■□□□ 1.39
PSPC1-206ENST00000619300 ANXA1P04083 346 aa23.74■■□□□ 1.39
PSPC1-206ENST00000619300 BMP2KLQ5H9B9 411 aa23.74■■□□□ 1.39
PSPC1-206ENST00000619300 PI4KAP1Q8N8J0 262 aa23.74■■□□□ 1.39
PSPC1-206ENST00000619300 SRCIN1Q9C0H9 1055 aa23.74■■□□□ 1.39
PSPC1-206ENST00000619300 UPF2Q9HAU5 1272 aaKnown RBP23.74■■□□□ 1.39
PSPC1-206ENST00000619300 DNAAF4Q8WXU2 420 aa23.74■■□□□ 1.39
PSPC1-206ENST00000619300 EVA1CP58658 441 aa23.73■■□□□ 1.39
PSPC1-206ENST00000619300 ZCRB1Q8TBF4 217 aaKnown RBP23.73■■□□□ 1.39
PSPC1-206ENST00000619300 PKD1L3Q7Z443 1732 aa23.73■■□□□ 1.39
PSPC1-206ENST00000619300 HYPKQ9NX55 129 aa23.72■■□□□ 1.39
PSPC1-206ENST00000619300 BEND3Q5T5X7 828 aa23.72■■□□□ 1.39
PSPC1-206ENST00000619300 CABP4P57796 275 aa23.71■■□□□ 1.39
PSPC1-206ENST00000619300 ATP8B2P98198 1209 aa23.71■■□□□ 1.39
PSPC1-206ENST00000619300 STRN4Q9NRL3 753 aa23.71■■□□□ 1.39
PSPC1-206ENST00000619300 ABCA3Q99758 1704 aa23.71■■□□□ 1.39
PSPC1-206ENST00000619300 UBTFL1P0CB47 393 aaPredicted RBP23.71■■□□□ 1.39
PSPC1-206ENST00000619300 PROSER3Q2NL68 480 aa23.71■■□□□ 1.39
PSPC1-206ENST00000619300 LARP1Q6PKG0 1096 aaKnown RBP23.71■■□□□ 1.39
PSPC1-206ENST00000619300 MRC1P22897 1456 aa23.7■■□□□ 1.38
PSPC1-206ENST00000619300 PCDH11XQ9BZA7 1347 aa23.7■■□□□ 1.38
PSPC1-206ENST00000619300 PCDH11YQ9BZA8 1340 aa23.7■■□□□ 1.38
PSPC1-206ENST00000619300 IL2RBP14784 551 aa23.7■■□□□ 1.38
PSPC1-206ENST00000619300 DDX21Q9NR30 783 aaKnown RBP eCLIP23.7■■□□□ 1.38
PSPC1-206ENST00000619300 ADCY9O60503 1353 aa23.7■■□□□ 1.38
PSPC1-206ENST00000619300 PLEKHM2Q8IWE5 1019 aa23.69■■□□□ 1.38
PSPC1-206ENST00000619300 LRRFIP2Q9Y608 721 aaKnown RBP23.69■■□□□ 1.38
PSPC1-206ENST00000619300 TTC5Q8N0Z6 440 aa23.69■■□□□ 1.38
PSPC1-206ENST00000619300 ZNF496Q96IT1 587 aaPredicted RBP23.69■■□□□ 1.38
PSPC1-206ENST00000619300 N4BP2Q86UW6 1770 aaPredicted RBP23.69■■□□□ 1.38
PSPC1-206ENST00000619300 KSR2Q6VAB6 950 aa23.68■■□□□ 1.38
PSPC1-206ENST00000619300 PDIA6Q15084 440 aa23.67■■□□□ 1.38
PSPC1-206ENST00000619300 TBC1D32Q96NH3 1257 aa23.67■■□□□ 1.38
PSPC1-206ENST00000619300 C16orf71Q8IYS4 520 aaPredicted RBP23.67■■□□□ 1.38
PSPC1-206ENST00000619300 SNRPA1P09661 255 aaKnown RBP23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms