RNA–Protein interactions for RNA: ENST00000619117.1

C9orf50-202, Transcript of chromosome 9 open reading frame 50, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf50, Length 796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf50-202ENST00000619117 MTHFSDQ2M296 383 aaKnown RBP20.49■□□□□ 0.87
C9orf50-202ENST00000619117 NUDCQ9Y266 331 aa20.48■□□□□ 0.87
C9orf50-202ENST00000619117 COL24A1Q17RW2 1714 aa20.47■□□□□ 0.87
C9orf50-202ENST00000619117 ITPK1Q13572 414 aa20.47■□□□□ 0.87
C9orf50-202ENST00000619117 LINC00116Q8NCU8 138 aa20.47■□□□□ 0.87
C9orf50-202ENST00000619117 AK7Q96M32 723 aa20.47■□□□□ 0.87
C9orf50-202ENST00000619117 RNMTO43148 476 aaKnown RBP20.46■□□□□ 0.87
C9orf50-202ENST00000619117 ATP6V1AP38606 617 aa20.46■□□□□ 0.87
C9orf50-202ENST00000619117 COL23A1Q86Y22 540 aaPredicted RBP20.46■□□□□ 0.87
C9orf50-202ENST00000619117 FLAD1Q8NFF5 587 aa20.46■□□□□ 0.87
C9orf50-202ENST00000619117 RSPH6AQ9H0K4 717 aa20.46■□□□□ 0.87
C9orf50-202ENST00000619117 NFATC2IPQ8NCF5 419 aa20.45■□□□□ 0.86
C9orf50-202ENST00000619117 SLC52A2Q9HAB3 445 aa20.45■□□□□ 0.86
C9orf50-202ENST00000619117 ZEB1P37275 1124 aaPredicted RBP20.44■□□□□ 0.86
C9orf50-202ENST00000619117 GAS2L2Q8NHY3 880 aa20.44■□□□□ 0.86
C9orf50-202ENST00000619117 SLC4A9Q96Q91 983 aa20.44■□□□□ 0.86
C9orf50-202ENST00000619117 LGR6Q9HBX8 967 aa20.44■□□□□ 0.86
C9orf50-202ENST00000619117 CICQ96RK0 1608 aaPredicted RBP20.44■□□□□ 0.86
C9orf50-202ENST00000619117 MAP3K5Q99683 1374 aa20.44■□□□□ 0.86
C9orf50-202ENST00000619117 UBR3Q6ZT12 1888 aa20.43■□□□□ 0.86
C9orf50-202ENST00000619117 PRKAR2BP31323 418 aa20.43■□□□□ 0.86
C9orf50-202ENST00000619117 RBM42Q9BTD8 480 aaKnown RBP20.43■□□□□ 0.86
C9orf50-202ENST00000619117 U2AF1L5P0DN76 240 aaPredicted RBP20.42■□□□□ 0.86
C9orf50-202ENST00000619117 SSFA2P28290 1259 aa20.42■□□□□ 0.86
C9orf50-202ENST00000619117 U2AF1Q01081 240 aaKnown RBP eCLIP20.42■□□□□ 0.86
C9orf50-202ENST00000619117 DDX10Q13206 875 aaKnown RBP20.42■□□□□ 0.86
C9orf50-202ENST00000619117 AMIGO3Q86WK7 504 aa20.42■□□□□ 0.86
C9orf50-202ENST00000619117 ARXQ96QS3 562 aa20.42■□□□□ 0.86
C9orf50-202ENST00000619117 MSH5O43196 834 aa20.41■□□□□ 0.86
C9orf50-202ENST00000619117 POLD1P28340 1107 aa20.41■□□□□ 0.86
C9orf50-202ENST00000619117 COL5A3P25940 1745 aaPredicted RBP20.41■□□□□ 0.86
C9orf50-202ENST00000619117 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.4■□□□□ 0.86
C9orf50-202ENST00000619117 FCHSD2O94868 740 aa20.4■□□□□ 0.86
C9orf50-202ENST00000619117 RALBP1Q15311 655 aa20.4■□□□□ 0.86
C9orf50-202ENST00000619117 CNTNAP4Q9C0A0 1308 aa20.4■□□□□ 0.86
C9orf50-202ENST00000619117 GNAT3A8MTJ3 354 aa20.39■□□□□ 0.85
C9orf50-202ENST00000619117 GNPATO15228 680 aa20.39■□□□□ 0.85
C9orf50-202ENST00000619117 PTCD1O75127 700 aaKnown RBP20.39■□□□□ 0.85
C9orf50-202ENST00000619117 RC3H1Q5TC82 1133 aaKnown RBP20.39■□□□□ 0.85
C9orf50-202ENST00000619117 PHACTR3Q96KR7 559 aa20.39■□□□□ 0.85
C9orf50-202ENST00000619117 FHDC1Q9C0D6 1143 aaPredicted RBP20.39■□□□□ 0.85
C9orf50-202ENST00000619117 PHF14O94880 888 aa20.38■□□□□ 0.85
C9orf50-202ENST00000619117 VIRMAQ69YN4 1812 aaKnown RBP20.38■□□□□ 0.85
C9orf50-202ENST00000619117 TJP1Q07157 1748 aa20.38■□□□□ 0.85
C9orf50-202ENST00000619117 KCPQ6ZWJ8 1503 aa20.37■□□□□ 0.85
C9orf50-202ENST00000619117 CEMIPQ8WUJ3 1361 aa20.37■□□□□ 0.85
C9orf50-202ENST00000619117 SYT17Q9BSW7 474 aa20.37■□□□□ 0.85
C9orf50-202ENST00000619117 IL17REQ8NFR9 667 aa20.36■□□□□ 0.85
C9orf50-202ENST00000619117 MSL1Q68DK7 614 aa20.35■□□□□ 0.85
C9orf50-202ENST00000619117 SMIM5Q71RC9 77 aa20.35■□□□□ 0.85
C9orf50-202ENST00000619117 RTCBQ9Y3I0 505 aaKnown RBP20.35■□□□□ 0.85
C9orf50-202ENST00000619117 ADRA2BP18089 450 aa20.34■□□□□ 0.85
C9orf50-202ENST00000619117 SLC39A6Q13433 755 aa20.34■□□□□ 0.85
C9orf50-202ENST00000619117 RPS6KA4O75676 772 aa20.33■□□□□ 0.85
C9orf50-202ENST00000619117 CRKLP46109 303 aaKnown RBP20.33■□□□□ 0.85
C9orf50-202ENST00000619117 TEFQ10587 303 aa20.33■□□□□ 0.85
C9orf50-202ENST00000619117 SIPA1L3O60292 1781 aaPredicted RBP20.33■□□□□ 0.84
C9orf50-202ENST00000619117 UBR2Q8IWV8 1755 aa20.33■□□□□ 0.84
C9orf50-202ENST00000619117 MYBBP1AQ9BQG0 1328 aaKnown RBP20.32■□□□□ 0.84
C9orf50-202ENST00000619117 MYH14Q7Z406 1995 aaKnown RBP20.3■□□□□ 0.84
C9orf50-202ENST00000619117 TRAPPC3LQ5T215 181 aa20.3■□□□□ 0.84
C9orf50-202ENST00000619117 DNAJC10Q8IXB1 793 aa20.3■□□□□ 0.84
C9orf50-202ENST00000619117 VSIG10Q8N0Z9 540 aa20.3■□□□□ 0.84
C9orf50-202ENST00000619117 DCAF8L1A6NGE4 600 aa20.29■□□□□ 0.84
C9orf50-202ENST00000619117 HTATSF1O43719 755 aaKnown RBP20.29■□□□□ 0.84
C9orf50-202ENST00000619117 TTC5Q8N0Z6 440 aa20.29■□□□□ 0.84
C9orf50-202ENST00000619117 NEFMP07197 916 aa20.28■□□□□ 0.84
C9orf50-202ENST00000619117 INTS5Q6P9B9 1019 aaKnown RBP20.28■□□□□ 0.84
C9orf50-202ENST00000619117 ZNF790Q6PG37 636 aa20.28■□□□□ 0.84
C9orf50-202ENST00000619117 RTF1Q92541 710 aaKnown RBP20.28■□□□□ 0.84
C9orf50-202ENST00000619117 ARHGEF1Q92888 912 aaKnown RBP20.28■□□□□ 0.84
C9orf50-202ENST00000619117 PLEKHF1Q96S99 279 aa20.28■□□□□ 0.84
C9orf50-202ENST00000619117 CCDC87Q9NVE4 849 aa20.28■□□□□ 0.84
C9orf50-202ENST00000619117 C4AP0C0L4 1744 aa20.27■□□□□ 0.84
C9orf50-202ENST00000619117 CYP19A1P11511 503 aaPredicted RBP20.27■□□□□ 0.84
C9orf50-202ENST00000619117 KLHL34Q8N239 644 aa20.26■□□□□ 0.83
C9orf50-202ENST00000619117 PNNQ9H307 717 aaKnown RBP20.26■□□□□ 0.83
C9orf50-202ENST00000619117 HEG1Q9ULI3 1381 aa20.25■□□□□ 0.83
C9orf50-202ENST00000619117 RFC4P35249 363 aa20.25■□□□□ 0.83
C9orf50-202ENST00000619117 MCM10Q7L590 875 aa20.25■□□□□ 0.83
C9orf50-202ENST00000619117 ZNF496Q96IT1 587 aaPredicted RBP20.25■□□□□ 0.83
C9orf50-202ENST00000619117 PRKRIP1Q9H875 184 aaPredicted RBP20.25■□□□□ 0.83
C9orf50-202ENST00000619117 SOS1Q07889 1333 aaPredicted RBP20.25■□□□□ 0.83
C9orf50-202ENST00000619117 GYS1P13807 737 aa20.24■□□□□ 0.83
C9orf50-202ENST00000619117 NLGN2Q8NFZ4 835 aa20.24■□□□□ 0.83
C9orf50-202ENST00000619117 CD2APQ9Y5K6 639 aa20.24■□□□□ 0.83
C9orf50-202ENST00000619117 BTBD11A6QL63 1104 aa20.23■□□□□ 0.83
C9orf50-202ENST00000619117 NFE2L2Q16236 605 aa20.23■□□□□ 0.83
C9orf50-202ENST00000619117 NLGN1Q8N2Q7 840 aa20.23■□□□□ 0.83
C9orf50-202ENST00000619117 FMNL2Q96PY5 1086 aa20.23■□□□□ 0.83
C9orf50-202ENST00000619117 USP42Q9H9J4 1324 aaKnown RBP20.23■□□□□ 0.83
C9orf50-202ENST00000619117 MAPK8IP3Q9UPT6 1336 aa20.23■□□□□ 0.83
C9orf50-202ENST00000619117 MMP10P09238 476 aa20.22■□□□□ 0.83
C9orf50-202ENST00000619117 DCTN1Q14203 1278 aa20.22■□□□□ 0.83
C9orf50-202ENST00000619117 STARD3NLO95772 234 aa20.21■□□□□ 0.83
C9orf50-202ENST00000619117 TEX13AQ9BXU3 409 aaPredicted RBP20.21■□□□□ 0.83
C9orf50-202ENST00000619117 ZBTB1Q9Y2K1 713 aa20.21■□□□□ 0.83
C9orf50-202ENST00000619117 COL15A1P39059 1388 aa20.21■□□□□ 0.83
C9orf50-202ENST00000619117 KCNQ3O43525 872 aa20.19■□□□□ 0.82
C9orf50-202ENST00000619117 SRP68Q9UHB9 627 aaKnown RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms