RNA–Protein interactions for RNA: ENST00000618970.4

PDCD6-213, Transcript of programmed cell death 6, humanhuman

TSL 3 BASIC

Gene PDCD6, Length 931 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-213ENST00000618970 ITGB4P16144 1822 aa17.88■□□□□ 0.45
PDCD6-213ENST00000618970 TAF1LQ8IZX4 1826 aa17.87■□□□□ 0.45
PDCD6-213ENST00000618970 PHACTR3Q96KR7 559 aa17.87■□□□□ 0.45
PDCD6-213ENST00000618970 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.87■□□□□ 0.45
PDCD6-213ENST00000618970 DLG5Q8TDM6 1919 aa17.87■□□□□ 0.45
PDCD6-213ENST00000618970 PCDH11XQ9BZA7 1347 aa17.87■□□□□ 0.45
PDCD6-213ENST00000618970 PCDH11YQ9BZA8 1340 aa17.87■□□□□ 0.45
PDCD6-213ENST00000618970 PRKAR2BP31323 418 aa17.86■□□□□ 0.45
PDCD6-213ENST00000618970 CYP27B1O15528 508 aa17.85■□□□□ 0.45
PDCD6-213ENST00000618970 POLD1P28340 1107 aa17.85■□□□□ 0.45
PDCD6-213ENST00000618970 KLHL34Q8N239 644 aa17.85■□□□□ 0.45
PDCD6-213ENST00000618970 ZNF784Q8NCA9 323 aaPredicted RBP17.85■□□□□ 0.45
PDCD6-213ENST00000618970 MTHFSDQ2M296 383 aaKnown RBP17.84■□□□□ 0.45
PDCD6-213ENST00000618970 PALLDQ8WX93 1383 aa17.83■□□□□ 0.45
PDCD6-213ENST00000618970 PLEKHO1Q53GL0 409 aaPredicted RBP17.83■□□□□ 0.44
PDCD6-213ENST00000618970 COL23A1Q86Y22 540 aaPredicted RBP17.83■□□□□ 0.44
PDCD6-213ENST00000618970 AMOTQ4VCS5 1084 aa17.82■□□□□ 0.44
PDCD6-213ENST00000618970 NLGN2Q8NFZ4 835 aa17.82■□□□□ 0.44
PDCD6-213ENST00000618970 SPG7Q9UQ90 795 aa17.82■□□□□ 0.44
PDCD6-213ENST00000618970 SCN11AQ9UI33 1791 aa17.81■□□□□ 0.44
PDCD6-213ENST00000618970 C4BP0C0L5 1744 aa17.81■□□□□ 0.44
PDCD6-213ENST00000618970 PHKG2P15735 406 aa17.81■□□□□ 0.44
PDCD6-213ENST00000618970 WDR43Q15061 677 aaKnown RBP eCLIP17.81■□□□□ 0.44
PDCD6-213ENST00000618970 MPRIPQ6WCQ1 1025 aa17.81■□□□□ 0.44
PDCD6-213ENST00000618970 ADAMTS7Q9UKP4 1686 aa17.8■□□□□ 0.44
PDCD6-213ENST00000618970 NKX1-1Q15270 411 aaPredicted RBP17.8■□□□□ 0.44
PDCD6-213ENST00000618970 GPR162Q16538 588 aa17.8■□□□□ 0.44
PDCD6-213ENST00000618970 MSL1Q68DK7 614 aa17.8■□□□□ 0.44
PDCD6-213ENST00000618970 CCDC146Q8IYE0 955 aa17.79■□□□□ 0.44
PDCD6-213ENST00000618970 IFNL2Q8IZJ0 200 aa17.79■□□□□ 0.44
PDCD6-213ENST00000618970 UBR3Q6ZT12 1888 aa17.78■□□□□ 0.44
PDCD6-213ENST00000618970 ZNF530Q6P9A1 599 aaPredicted RBP17.78■□□□□ 0.44
PDCD6-213ENST00000618970 AMIGO3Q86WK7 504 aa17.77■□□□□ 0.44
PDCD6-213ENST00000618970 PELP1Q8IZL8 1130 aaKnown RBP17.77■□□□□ 0.44
PDCD6-213ENST00000618970 PIGBQ92521 554 aa17.77■□□□□ 0.44
PDCD6-213ENST00000618970 RUNDC1Q96C34 613 aa17.77■□□□□ 0.44
PDCD6-213ENST00000618970 KDM6AO15550 1401 aaPredicted RBP17.76■□□□□ 0.43
PDCD6-213ENST00000618970 AKAP4Q5JQC9 854 aa17.76■□□□□ 0.43
PDCD6-213ENST00000618970 FAM9BQ8IZU0 186 aa17.76■□□□□ 0.43
PDCD6-213ENST00000618970 PNNQ9H307 717 aaKnown RBP17.76■□□□□ 0.43
PDCD6-213ENST00000618970 GAS2L2Q8NHY3 880 aa17.75■□□□□ 0.43
PDCD6-213ENST00000618970 SIPA1L3O60292 1781 aaPredicted RBP17.74■□□□□ 0.43
PDCD6-213ENST00000618970 YBX3P16989 372 aaKnown RBP eCLIP17.74■□□□□ 0.431e-8■□□□□ 8.4
PDCD6-213ENST00000618970 NFE2L2Q16236 605 aa17.74■□□□□ 0.43
PDCD6-213ENST00000618970 SMIM5Q71RC9 77 aa17.74■□□□□ 0.43
PDCD6-213ENST00000618970 SMARCC1Q92922 1105 aaPredicted RBP17.74■□□□□ 0.43
PDCD6-213ENST00000618970 LGR6Q9HBX8 967 aa17.74■□□□□ 0.43
PDCD6-213ENST00000618970 TMPOP42166 694 aaKnown RBP17.73■□□□□ 0.43
PDCD6-213ENST00000618970 IL17REQ8NFR9 667 aa17.73■□□□□ 0.43
PDCD6-213ENST00000618970 AK7Q96M32 723 aa17.72■□□□□ 0.43
PDCD6-213ENST00000618970 GNAT3A8MTJ3 354 aa17.71■□□□□ 0.43
PDCD6-213ENST00000618970 APAF1O14727 1248 aa17.71■□□□□ 0.43
PDCD6-213ENST00000618970 RNMTO43148 476 aaKnown RBP17.71■□□□□ 0.43
PDCD6-213ENST00000618970 PHF14O94880 888 aa17.71■□□□□ 0.43
PDCD6-213ENST00000618970 C1orf141Q5JVX7 400 aa17.71■□□□□ 0.43
PDCD6-213ENST00000618970 LINC00116Q8NCU8 138 aa17.71■□□□□ 0.43
PDCD6-213ENST00000618970 FLAD1Q8NFF5 587 aa17.71■□□□□ 0.43
PDCD6-213ENST00000618970 DCAF5Q96JK2 942 aa17.71■□□□□ 0.43
PDCD6-213ENST00000618970 ASAP1Q9ULH1 1129 aa17.71■□□□□ 0.43
PDCD6-213ENST00000618970 MAPK8IP3Q9UPT6 1336 aa17.71■□□□□ 0.42
PDCD6-213ENST00000618970 LOC102724428A0A0B4J2F2 783 aa17.7■□□□□ 0.42
PDCD6-213ENST00000618970 HSP90AB1P08238 724 aaKnown RBP17.7■□□□□ 0.42
PDCD6-213ENST00000618970 SIK1P57059 783 aa17.7■□□□□ 0.42
PDCD6-213ENST00000618970 TMOD3Q9NYL9 352 aa17.7■□□□□ 0.42
PDCD6-213ENST00000618970 RRP7AQ9Y3A4 280 aaKnown RBP17.7■□□□□ 0.42
PDCD6-213ENST00000618970 CEMIPQ8WUJ3 1361 aa17.69■□□□□ 0.42
PDCD6-213ENST00000618970 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.69■□□□□ 0.42
PDCD6-213ENST00000618970 HTATSF1O43719 755 aaKnown RBP17.69■□□□□ 0.42
PDCD6-213ENST00000618970 RIPK4P57078 832 aa17.69■□□□□ 0.42
PDCD6-213ENST00000618970 ITPK1Q13572 414 aa17.69■□□□□ 0.42
PDCD6-213ENST00000618970 TRIM35Q9UPQ4 493 aa17.69■□□□□ 0.42
PDCD6-213ENST00000618970 ERVV-2B6SEH9 535 aa17.68■□□□□ 0.42
PDCD6-213ENST00000618970 NEFMP07197 916 aa17.68■□□□□ 0.42
PDCD6-213ENST00000618970 HMGB2P26583 209 aaKnown RBP17.68■□□□□ 0.42
PDCD6-213ENST00000618970 DCTN1Q14203 1278 aa17.68■□□□□ 0.42
PDCD6-213ENST00000618970 MRC1P22897 1456 aa17.68■□□□□ 0.42
PDCD6-213ENST00000618970 SENP3-EIF4A1A0A087X0R7 540 aa17.67■□□□□ 0.42
PDCD6-213ENST00000618970 CD2APQ9Y5K6 639 aa17.67■□□□□ 0.42
PDCD6-213ENST00000618970 SSFA2P28290 1259 aa17.66■□□□□ 0.42
PDCD6-213ENST00000618970 C1QTNF8P60827 252 aa17.66■□□□□ 0.42
PDCD6-213ENST00000618970 NEUROD2Q15784 382 aa17.66■□□□□ 0.42
PDCD6-213ENST00000618970 MCM10Q7L590 875 aa17.66■□□□□ 0.42
PDCD6-213ENST00000618970 ATG3Q9NT62 314 aa17.66■□□□□ 0.42
PDCD6-213ENST00000618970 GRIN3BO60391 1043 aa17.65■□□□□ 0.42
PDCD6-213ENST00000618970 ATP6V1AP38606 617 aa17.65■□□□□ 0.42
PDCD6-213ENST00000618970 NCBP3Q53F19 620 aaKnown RBP17.65■□□□□ 0.42
PDCD6-213ENST00000618970 NFATC2IPQ8NCF5 419 aa17.65■□□□□ 0.42
PDCD6-213ENST00000618970 ZNF831Q5JPB2 1677 aa17.64■□□□□ 0.42
PDCD6-213ENST00000618970 COL5A3P25940 1745 aaPredicted RBP17.64■□□□□ 0.41
PDCD6-213ENST00000618970 GNPATO15228 680 aa17.64■□□□□ 0.41
PDCD6-213ENST00000618970 THUMPD2Q9BTF0 503 aaKnown RBP17.64■□□□□ 0.41
PDCD6-213ENST00000618970 SLC52A2Q9HAB3 445 aa17.64■□□□□ 0.41
PDCD6-213ENST00000618970 SLC4A9Q96Q91 983 aa17.63■□□□□ 0.41
PDCD6-213ENST00000618970 KDM3BQ7LBC6 1761 aa17.62■□□□□ 0.41
PDCD6-213ENST00000618970 UBR2Q8IWV8 1755 aa17.62■□□□□ 0.41
PDCD6-213ENST00000618970 CABP4P57796 275 aa17.62■□□□□ 0.41
PDCD6-213ENST00000618970 CCDC27Q2M243 656 aa17.62■□□□□ 0.41
PDCD6-213ENST00000618970 RTF1Q92541 710 aaKnown RBP17.62■□□□□ 0.41
PDCD6-213ENST00000618970 CEP350Q5VT06 3117 aa17.62■□□□□ 0.41
PDCD6-213ENST00000618970 GIGYF1O75420 1035 aaPredicted RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms