RNA–Protein interactions for RNA: ENST00000618819.4

PTPN9-206, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN9, Length 7,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-206ENST00000618819 ZSCAN31Q96LW9 406 aaPredicted RBP16.83■□□□□ 0.28
PTPN9-206ENST00000618819 IGSF3O75054 1194 aa16.82■□□□□ 0.28
PTPN9-206ENST00000618819 JADE2Q9NQC1 790 aa16.82■□□□□ 0.28
PTPN9-206ENST00000618819 MPHOSPH10O00566 681 aaKnown RBP16.82■□□□□ 0.28
PTPN9-206ENST00000618819 FERP16591 822 aa16.82■□□□□ 0.28
PTPN9-206ENST00000618819 TTC31Q49AM3 519 aaPredicted RBP16.82■□□□□ 0.28
PTPN9-206ENST00000618819 PPP1R14CQ8TAE6 165 aa16.82■□□□□ 0.28
PTPN9-206ENST00000618819 CEP83Q9Y592 693 aa16.82■□□□□ 0.28
PTPN9-206ENST00000618819 GUCY1B3Q02153 619 aa16.82■□□□□ 0.28
PTPN9-206ENST00000618819 TWISTNBQ3B726 338 aaPredicted RBP16.82■□□□□ 0.28
PTPN9-206ENST00000618819 NAA15Q9BXJ9 866 aaKnown RBP16.82■□□□□ 0.28
PTPN9-206ENST00000618819 TAOK3Q9H2K8 898 aa16.82■□□□□ 0.28
PTPN9-206ENST00000618819 PPP1R12BO60237 982 aaPredicted RBP16.82■□□□□ 0.28
PTPN9-206ENST00000618819 A0A1W2PRG0 241 aa16.81■□□□□ 0.28
PTPN9-206ENST00000618819 TCP11L2Q8N4U5 519 aa16.81■□□□□ 0.28
PTPN9-206ENST00000618819 AACSQ86V21 672 aa16.81■□□□□ 0.28
PTPN9-206ENST00000618819 UBAC1Q9BSL1 405 aa16.81■□□□□ 0.28
PTPN9-206ENST00000618819 ZNF830Q96NB3 372 aaPredicted RBP16.81■□□□□ 0.28
PTPN9-206ENST00000618819 VPS36Q86VN1 386 aa16.81■□□□□ 0.28
PTPN9-206ENST00000618819 YEATS4O95619 227 aa16.81■□□□□ 0.28
PTPN9-206ENST00000618819 CCDC12Q8WUD4 166 aaPredicted RBP16.81■□□□□ 0.28
PTPN9-206ENST00000618819 ATRIPQ8WXE1 791 aa16.8■□□□□ 0.28
PTPN9-206ENST00000618819 ZWINTO95229 277 aa16.8■□□□□ 0.28
PTPN9-206ENST00000618819 KIF6Q6ZMV9 814 aa16.8■□□□□ 0.28
PTPN9-206ENST00000618819 WDR66Q8TBY9 1149 aa16.8■□□□□ 0.28
PTPN9-206ENST00000618819 ALS2CR12Q96Q35 445 aa16.8■□□□□ 0.28
PTPN9-206ENST00000618819 CEP131Q9UPN4 1083 aa16.8■□□□□ 0.28
PTPN9-206ENST00000618819 TSG101Q99816 390 aa16.8■□□□□ 0.28
PTPN9-206ENST00000618819 BIN1O00499 593 aa16.8■□□□□ 0.28
PTPN9-206ENST00000618819 DDX54Q8TDD1 881 aaKnown RBP16.8■□□□□ 0.28
PTPN9-206ENST00000618819 SSFA2P28290 1259 aa16.8■□□□□ 0.28
PTPN9-206ENST00000618819 MCM6Q14566 821 aa16.8■□□□□ 0.28
PTPN9-206ENST00000618819 SLC4A2P04920 1241 aa16.79■□□□□ 0.28
PTPN9-206ENST00000618819 ARID4AP29374 1257 aaPredicted RBP16.79■□□□□ 0.28
PTPN9-206ENST00000618819 ISM2Q6H9L7 571 aa16.79■□□□□ 0.28
PTPN9-206ENST00000618819 C10orf67Q8IYJ2 551 aa16.79■□□□□ 0.28
PTPN9-206ENST00000618819 IVLP07476 585 aa16.79■□□□□ 0.28
PTPN9-206ENST00000618819 NOP2P46087 812 aaKnown RBP16.78■□□□□ 0.28
PTPN9-206ENST00000618819 NAA25Q14CX7 972 aa16.78■□□□□ 0.28
PTPN9-206ENST00000618819 NLRP2Q9NX02 1062 aa16.78■□□□□ 0.28
PTPN9-206ENST00000618819 IL1RAPL2Q9NP60 686 aa16.78■□□□□ 0.28
PTPN9-206ENST00000618819 RBM27Q9P2N5 1060 aaKnown RBP16.78■□□□□ 0.28
PTPN9-206ENST00000618819 UACAQ9BZF9 1416 aa16.78■□□□□ 0.28
PTPN9-206ENST00000618819 CCDC7Q96M83 1385 aa16.78■□□□□ 0.28
PTPN9-206ENST00000618819 GDPD2Q9HCC8 539 aa16.78■□□□□ 0.28
PTPN9-206ENST00000618819 GNL3LQ9NVN8 582 aaKnown RBP16.78■□□□□ 0.28
PTPN9-206ENST00000618819 GNG11P61952 73 aa16.78■□□□□ 0.28
PTPN9-206ENST00000618819 ERCC6Q03468 1493 aa16.78■□□□□ 0.28
PTPN9-206ENST00000618819 CNTLNQ9NXG0 1405 aa16.78■□□□□ 0.28
PTPN9-206ENST00000618819 SPTY2D1Q68D10 685 aaPredicted RBP16.78■□□□□ 0.28
PTPN9-206ENST00000618819 TMCO4Q5TGY1 634 aa16.77■□□□□ 0.28
PTPN9-206ENST00000618819 RBM5P52756 815 aaKnown RBP eCLIP16.77■□□□□ 0.27
PTPN9-206ENST00000618819 CPSF2Q9P2I0 782 aaKnown RBP16.77■□□□□ 0.27
PTPN9-206ENST00000618819 MTHFSP49914 203 aa16.76■□□□□ 0.27
PTPN9-206ENST00000618819 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.76■□□□□ 0.27
PTPN9-206ENST00000618819 V9GYY5 206 aaPredicted RBP16.76■□□□□ 0.27
PTPN9-206ENST00000618819 VGFO15240 615 aaPredicted RBP16.76■□□□□ 0.27
PTPN9-206ENST00000618819 MYO1BO43795 1136 aa16.76■□□□□ 0.27
PTPN9-206ENST00000618819 CAPN2P17655 700 aa16.76■□□□□ 0.27
PTPN9-206ENST00000618819 TERF1P54274 439 aa16.76■□□□□ 0.27
PTPN9-206ENST00000618819 WASF1Q92558 559 aa16.76■□□□□ 0.27
PTPN9-206ENST00000618819 RBM42Q9BTD8 480 aaKnown RBP16.76■□□□□ 0.27
PTPN9-206ENST00000618819 CFAP58Q5T655 872 aa16.75■□□□□ 0.27
PTPN9-206ENST00000618819 LARP6Q9BRS8 491 aaKnown RBP16.75■□□□□ 0.27
PTPN9-206ENST00000618819 PDE3AQ14432 1141 aa16.75■□□□□ 0.27
PTPN9-206ENST00000618819 NOL3O60936 208 aaKnown RBP16.75■□□□□ 0.27
PTPN9-206ENST00000618819 KIF4AO95239 1232 aa16.75■□□□□ 0.27
PTPN9-206ENST00000618819 PSMC4P43686 418 aa16.75■□□□□ 0.27
PTPN9-206ENST00000618819 CCDC121Q6ZUS5 278 aa16.75■□□□□ 0.27
PTPN9-206ENST00000618819 FEZ1Q99689 392 aa16.75■□□□□ 0.27
PTPN9-206ENST00000618819 CABP2Q9NPB3 220 aa16.75■□□□□ 0.27
PTPN9-206ENST00000618819 CHMP4BP1P59074 171 aa16.75■□□□□ 0.27
PTPN9-206ENST00000618819 NUTM1Q86Y26 1132 aa16.75■□□□□ 0.27
PTPN9-206ENST00000618819 SKAP1Q86WV1 359 aa16.75■□□□□ 0.27
PTPN9-206ENST00000618819 IKBKGQ9Y6K9 419 aa16.75■□□□□ 0.27
PTPN9-206ENST00000618819 TNPO1Q92973 898 aaKnown RBP16.75■□□□□ 0.27
PTPN9-206ENST00000618819 NSRP1Q9H0G5 558 aaKnown RBP16.75■□□□□ 0.27
PTPN9-206ENST00000618819 PRKAR2BP31323 418 aa16.74■□□□□ 0.27
PTPN9-206ENST00000618819 GSDMDP57764 484 aa16.74■□□□□ 0.27
PTPN9-206ENST00000618819 CNNM3Q8NE01 707 aa16.74■□□□□ 0.27
PTPN9-206ENST00000618819 GBP6Q6ZN66 633 aa16.74■□□□□ 0.27
PTPN9-206ENST00000618819 MIPOL1Q8TD10 442 aa16.74■□□□□ 0.27
PTPN9-206ENST00000618819 PAXBP1Q9Y5B6 917 aa16.74■□□□□ 0.27
PTPN9-206ENST00000618819 MTIF2P46199 727 aaKnown RBP16.74■□□□□ 0.27
PTPN9-206ENST00000618819 TSNARE1Q96NA8 513 aa16.74■□□□□ 0.27
PTPN9-206ENST00000618819 CCDC155Q8N6L0 562 aa16.74■□□□□ 0.27
PTPN9-206ENST00000618819 SELENOSQ9BQE4 189 aa16.73■□□□□ 0.27
PTPN9-206ENST00000618819 DNAJC21Q5F1R6 531 aaKnown RBP16.73■□□□□ 0.27
PTPN9-206ENST00000618819 DDX46Q7L014 1031 aaKnown RBP16.73■□□□□ 0.27
PTPN9-206ENST00000618819 VPS18Q9P253 973 aa16.73■□□□□ 0.27
PTPN9-206ENST00000618819 NEMFO60524 1076 aa16.73■□□□□ 0.27
PTPN9-206ENST00000618819 TRIM21P19474 475 aaKnown RBP16.73■□□□□ 0.27
PTPN9-206ENST00000618819 FAM160A1Q05DH4 1040 aa16.73■□□□□ 0.27
PTPN9-206ENST00000618819 PRPF40BQ6NWY9 871 aaKnown RBP16.73■□□□□ 0.27
PTPN9-206ENST00000618819 RPUSD2Q8IZ73 545 aaKnown RBP16.73■□□□□ 0.27
PTPN9-206ENST00000618819 OTUD6BQ8N6M0 293 aa16.73■□□□□ 0.27
PTPN9-206ENST00000618819 TPD52P55327 224 aaPredicted RBP16.73■□□□□ 0.27
PTPN9-206ENST00000618819 PRIMPOLQ96LW4 560 aa16.73■□□□□ 0.27
PTPN9-206ENST00000618819 MYL6BP14649 208 aa16.72■□□□□ 0.27
PTPN9-206ENST00000618819 CCDC82Q8N4S0 544 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms