RNA–Protein interactions for RNA: ENST00000618771.1

TRAF4-217, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-217ENST00000618771 C1orf141Q5JVX7 400 aa29.57■■■□□ 2.32
TRAF4-217ENST00000618771 VIRMAQ69YN4 1812 aaKnown RBP29.57■■■□□ 2.32
TRAF4-217ENST00000618771 SCN11AQ9UI33 1791 aa29.57■■■□□ 2.32
TRAF4-217ENST00000618771 COL3A1P02461 1466 aaPredicted RBP29.56■■■□□ 2.32
TRAF4-217ENST00000618771 ERVV-2B6SEH9 535 aa29.56■■■□□ 2.32
TRAF4-217ENST00000618771 COL23A1Q86Y22 540 aaPredicted RBP29.56■■■□□ 2.32
TRAF4-217ENST00000618771 ASAP1Q9ULH1 1129 aa29.56■■■□□ 2.32
TRAF4-217ENST00000618771 C1QTNF8P60827 252 aa29.55■■■□□ 2.32
TRAF4-217ENST00000618771 UBR3Q6ZT12 1888 aa29.55■■■□□ 2.32
TRAF4-217ENST00000618771 LOC102724428A0A0B4J2F2 783 aa29.54■■■□□ 2.32
TRAF4-217ENST00000618771 SIK1P57059 783 aa29.54■■■□□ 2.32
TRAF4-217ENST00000618771 SENP3-EIF4A1A0A087X0R7 540 aa29.53■■■□□ 2.32
TRAF4-217ENST00000618771 HMOX1P09601 288 aa29.53■■■□□ 2.32
TRAF4-217ENST00000618771 MSL1Q68DK7 614 aa29.52■■■□□ 2.32
TRAF4-217ENST00000618771 ATG3Q9NT62 314 aa29.52■■■□□ 2.32
TRAF4-217ENST00000618771 ZNF831Q5JPB2 1677 aa29.5■■■□□ 2.31
TRAF4-217ENST00000618771 CABP4P57796 275 aa29.5■■■□□ 2.31
TRAF4-217ENST00000618771 AK7Q96M32 723 aa29.49■■■□□ 2.31
TRAF4-217ENST00000618771 YBX3P16989 372 aaKnown RBP eCLIP29.47■■■□□ 2.312e-7■■□□□ 13.8
TRAF4-217ENST00000618771 ATP6V1AP38606 617 aa29.46■■■□□ 2.31
TRAF4-217ENST00000618771 LINC00116Q8NCU8 138 aa29.46■■■□□ 2.31
TRAF4-217ENST00000618771 FLAD1Q8NFF5 587 aa29.46■■■□□ 2.31
TRAF4-217ENST00000618771 GIGYF1O75420 1035 aaPredicted RBP29.45■■■□□ 2.31
TRAF4-217ENST00000618771 ITPK1Q13572 414 aa29.45■■■□□ 2.31
TRAF4-217ENST00000618771 AKAP4Q5JQC9 854 aa29.45■■■□□ 2.31
TRAF4-217ENST00000618771 COL5A3P25940 1745 aaPredicted RBP29.45■■■□□ 2.3
TRAF4-217ENST00000618771 U2SURPO15042 1029 aaKnown RBP29.44■■■□□ 2.3
TRAF4-217ENST00000618771 GRIN3BO60391 1043 aa29.44■■■□□ 2.3
TRAF4-217ENST00000618771 CFAP53Q96M91 514 aa29.43■■■□□ 2.3
TRAF4-217ENST00000618771 NFATC2IPQ8NCF5 419 aa29.42■■■□□ 2.3
TRAF4-217ENST00000618771 ADAMTS7Q9UKP4 1686 aa29.41■■■□□ 2.3
TRAF4-217ENST00000618771 AMIGO3Q86WK7 504 aa29.41■■■□□ 2.3
TRAF4-217ENST00000618771 RBM42Q9BTD8 480 aaKnown RBP29.41■■■□□ 2.3
TRAF4-217ENST00000618771 PHF14O94880 888 aa29.4■■■□□ 2.3
TRAF4-217ENST00000618771 PPP2R1AP30153 589 aa29.4■■■□□ 2.3
TRAF4-217ENST00000618771 MTHFSDQ2M296 383 aaKnown RBP29.4■■■□□ 2.3
TRAF4-217ENST00000618771 SLC4A9Q96Q91 983 aa29.39■■■□□ 2.3
TRAF4-217ENST00000618771 MRC1P22897 1456 aa29.39■■■□□ 2.3
TRAF4-217ENST00000618771 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.38■■■□□ 2.29
TRAF4-217ENST00000618771 GNPATO15228 680 aa29.38■■■□□ 2.29
TRAF4-217ENST00000618771 SSFA2P28290 1259 aa29.38■■■□□ 2.29
TRAF4-217ENST00000618771 CD2APQ9Y5K6 639 aa29.37■■■□□ 2.29
TRAF4-217ENST00000618771 MYH14Q7Z406 1995 aaKnown RBP29.37■■■□□ 2.29
TRAF4-217ENST00000618771 RNMTO43148 476 aaKnown RBP29.36■■■□□ 2.29
TRAF4-217ENST00000618771 SMIM5Q71RC9 77 aa29.36■■■□□ 2.29
TRAF4-217ENST00000618771 SLC52A2Q9HAB3 445 aa29.36■■■□□ 2.29
TRAF4-217ENST00000618771 LGR6Q9HBX8 967 aa29.36■■■□□ 2.29
TRAF4-217ENST00000618771 CICQ96RK0 1608 aaPredicted RBP29.35■■■□□ 2.29
TRAF4-217ENST00000618771 TJP1Q07157 1748 aa29.34■■■□□ 2.29
TRAF4-217ENST00000618771 PTCD1O75127 700 aaKnown RBP29.34■■■□□ 2.29
TRAF4-217ENST00000618771 NUDCQ9Y266 331 aa29.33■■■□□ 2.29
TRAF4-217ENST00000618771 CNTNAP4Q9C0A0 1308 aa29.31■■■□□ 2.28
TRAF4-217ENST00000618771 GAS2L2Q8NHY3 880 aa29.31■■■□□ 2.28
TRAF4-217ENST00000618771 RC3H1Q5TC82 1133 aaKnown RBP29.3■■■□□ 2.28
TRAF4-217ENST00000618771 RSPH6AQ9H0K4 717 aa29.29■■■□□ 2.28
TRAF4-217ENST00000618771 RTCBQ9Y3I0 505 aaKnown RBP29.29■■■□□ 2.28
TRAF4-217ENST00000618771 PRKAR2BP31323 418 aa29.28■■■□□ 2.28
TRAF4-217ENST00000618771 C4AP0C0L4 1744 aa29.28■■■□□ 2.28
TRAF4-217ENST00000618771 ATP10DQ9P241 1426 aa29.28■■■□□ 2.28
TRAF4-217ENST00000618771 SIPA1L3O60292 1781 aaPredicted RBP29.27■■■□□ 2.28
TRAF4-217ENST00000618771 UBR2Q8IWV8 1755 aa29.27■■■□□ 2.28
TRAF4-217ENST00000618771 U2AF1L5P0DN76 240 aaPredicted RBP29.27■■■□□ 2.28
TRAF4-217ENST00000618771 U2AF1Q01081 240 aaKnown RBP eCLIP29.27■■■□□ 2.283e-7■■□□□ 12.8
TRAF4-217ENST00000618771 CEP350Q5VT06 3117 aa29.26■■■□□ 2.27
TRAF4-217ENST00000618771 GNAT3A8MTJ3 354 aa29.26■■■□□ 2.27
TRAF4-217ENST00000618771 TRAPPC3LQ5T215 181 aa29.25■■■□□ 2.27
TRAF4-217ENST00000618771 WWC3Q9ULE0 1092 aa29.25■■■□□ 2.27
TRAF4-217ENST00000618771 KCPQ6ZWJ8 1503 aa29.25■■■□□ 2.27
TRAF4-217ENST00000618771 ADRA2BP18089 450 aa29.24■■■□□ 2.27
TRAF4-217ENST00000618771 SLC39A6Q13433 755 aa29.24■■■□□ 2.27
TRAF4-217ENST00000618771 PHACTR3Q96KR7 559 aa29.24■■■□□ 2.27
TRAF4-217ENST00000618771 RPS6KA4O75676 772 aa29.23■■■□□ 2.27
TRAF4-217ENST00000618771 CRKLP46109 303 aaKnown RBP29.23■■■□□ 2.27
TRAF4-217ENST00000618771 IL17REQ8NFR9 667 aa29.21■■■□□ 2.27
TRAF4-217ENST00000618771 FCHSD2O94868 740 aa29.2■■■□□ 2.26
TRAF4-217ENST00000618771 ARHGEF1Q92888 912 aaKnown RBP29.2■■■□□ 2.26
TRAF4-217ENST00000618771 GPBP1L1Q9HC44 474 aaPredicted RBP29.2■■■□□ 2.26
TRAF4-217ENST00000618771 TEFQ10587 303 aa29.19■■■□□ 2.26
TRAF4-217ENST00000618771 DNAJC10Q8IXB1 793 aa29.19■■■□□ 2.26
TRAF4-217ENST00000618771 ZNF526Q8TF50 670 aaPredicted RBP29.19■■■□□ 2.26
TRAF4-217ENST00000618771 RFC4P35249 363 aa29.17■■■□□ 2.26
TRAF4-217ENST00000618771 ADCY9O60503 1353 aa29.16■■■□□ 2.26
TRAF4-217ENST00000618771 CEMIPQ8WUJ3 1361 aa29.16■■■□□ 2.26
TRAF4-217ENST00000618771 DDX10Q13206 875 aaKnown RBP29.16■■■□□ 2.26
TRAF4-217ENST00000618771 TTC5Q8N0Z6 440 aa29.16■■■□□ 2.26
TRAF4-217ENST00000618771 INTS5Q6P9B9 1019 aaKnown RBP29.15■■■□□ 2.26
TRAF4-217ENST00000618771 DLG5Q8TDM6 1919 aa29.14■■■□□ 2.26
TRAF4-217ENST00000618771 MMP10P09238 476 aa29.14■■■□□ 2.26
TRAF4-217ENST00000618771 NLGN1Q8N2Q7 840 aa29.14■■■□□ 2.26
TRAF4-217ENST00000618771 CCDC87Q9NVE4 849 aa29.14■■■□□ 2.26
TRAF4-217ENST00000618771 VSIG10Q8N0Z9 540 aa29.13■■■□□ 2.25
TRAF4-217ENST00000618771 KIF13BQ9NQT8 1826 aa29.13■■■□□ 2.25
TRAF4-217ENST00000618771 CYP19A1P11511 503 aaPredicted RBP29.12■■■□□ 2.25
TRAF4-217ENST00000618771 GYS1P13807 737 aa29.12■■■□□ 2.25
TRAF4-217ENST00000618771 RALBP1Q15311 655 aa29.12■■■□□ 2.25
TRAF4-217ENST00000618771 ZNF790Q6PG37 636 aa29.11■■■□□ 2.25
TRAF4-217ENST00000618771 RTF1Q92541 710 aaKnown RBP29.09■■■□□ 2.25
TRAF4-217ENST00000618771 ZNF496Q96IT1 587 aaPredicted RBP29.09■■■□□ 2.25
TRAF4-217ENST00000618771 SOS1Q07889 1333 aaPredicted RBP29.09■■■□□ 2.25
TRAF4-217ENST00000618771 USP42Q9H9J4 1324 aaKnown RBP29.09■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms