RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 POTEB2H3BUK9 544 aa3.58□□□□□ -1.84
LPP-221ENST00000618621 ANKLE2Q86XL3 938 aa3.58□□□□□ -1.84
LPP-221ENST00000618621 ABTB2Q8N961 1025 aa3.58□□□□□ -1.84
LPP-221ENST00000618621 ARHGAP45Q92619 1136 aa3.58□□□□□ -1.84
LPP-221ENST00000618621 PRIMPOLQ96LW4 560 aa3.58□□□□□ -1.84
LPP-221ENST00000618621 LUC7LQ9NQ29 371 aaKnown RBP3.58□□□□□ -1.84
LPP-221ENST00000618621 ZSCAN25Q6NSZ9 544 aa3.58□□□□□ -1.84
LPP-221ENST00000618621 NUDT16Q96DE0 195 aaKnown RBP3.58□□□□□ -1.84
LPP-221ENST00000618621 ZHX1Q9UKY1 873 aaPredicted RBP3.58□□□□□ -1.84
LPP-221ENST00000618621 CNTRLQ7Z7A1 2325 aa3.58□□□□□ -1.84
LPP-221ENST00000618621 ATRXP46100 2492 aa3.58□□□□□ -1.84
LPP-221ENST00000618621 EIF3JO75822 258 aaKnown RBP3.58□□□□□ -1.84
LPP-221ENST00000618621 MCM3P25205 808 aa3.58□□□□□ -1.84
LPP-221ENST00000618621 ERICH3Q5RHP9 1530 aa3.58□□□□□ -1.84
LPP-221ENST00000618621 CCDC82Q8N4S0 544 aa3.58□□□□□ -1.84
LPP-221ENST00000618621 ZNF397Q8NF99 534 aaPredicted RBP3.58□□□□□ -1.84
LPP-221ENST00000618621 SYTL4Q96C24 671 aaPredicted RBP3.58□□□□□ -1.84
LPP-221ENST00000618621 EVI5LQ96CN4 794 aa3.58□□□□□ -1.84
LPP-221ENST00000618621 FSD1Q9BTV5 496 aa3.58□□□□□ -1.84
LPP-221ENST00000618621 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.58□□□□□ -1.84
LPP-221ENST00000618621 CCDC61Q9Y6R9 512 aa3.58□□□□□ -1.84
LPP-221ENST00000618621 FYCO1Q9BQS8 1478 aa3.58□□□□□ -1.84
LPP-221ENST00000618621 FIBPO43427 364 aa3.58□□□□□ -1.84
LPP-221ENST00000618621 NOLC1Q14978 699 aaKnown RBP eCLIP3.58□□□□□ -1.84
LPP-221ENST00000618621 IQCEQ6IPM2 695 aa3.58□□□□□ -1.84
LPP-221ENST00000618621 STRN4Q9NRL3 753 aa3.58□□□□□ -1.84
LPP-221ENST00000618621 NLRP2Q9NX02 1062 aa3.58□□□□□ -1.84
LPP-221ENST00000618621 ADGRF5Q8IZF2 1346 aa3.58□□□□□ -1.84
LPP-221ENST00000618621 MAP1BP46821 2468 aaKnown RBP3.58□□□□□ -1.84
LPP-221ENST00000618621 ABCC5O15440 1437 aa3.58□□□□□ -1.84
LPP-221ENST00000618621 TEX2Q8IWB9 1127 aa3.58□□□□□ -1.84
LPP-221ENST00000618621 UPF3BQ9BZI7 483 aaKnown RBP3.58□□□□□ -1.84
LPP-221ENST00000618621 ADCY5O95622 1261 aa3.58□□□□□ -1.84
LPP-221ENST00000618621 USP26Q9BXU7 913 aa3.58□□□□□ -1.84
LPP-221ENST00000618621 TSPYL1Q9H0U9 437 aa3.58□□□□□ -1.84
LPP-221ENST00000618621 ERLIN1O75477 346 aa3.58□□□□□ -1.84
LPP-221ENST00000618621 TRIM34Q9BYJ4 488 aa3.58□□□□□ -1.84
LPP-221ENST00000618621 GOLGA6L10A6NI86 522 aa3.58□□□□□ -1.84
LPP-221ENST00000618621 HDGFL1Q5TGJ6 251 aa3.58□□□□□ -1.84
LPP-221ENST00000618621 TXLNAP40222 546 aa3.58□□□□□ -1.84
LPP-221ENST00000618621 IMMTQ16891 758 aaKnown RBP3.58□□□□□ -1.84
LPP-221ENST00000618621 KLHL40Q2TBA0 621 aa3.58□□□□□ -1.84
LPP-221ENST00000618621 URB2Q14146 1524 aaKnown RBP3.58□□□□□ -1.84
LPP-221ENST00000618621 NEFHP12036 1026 aa3.58□□□□□ -1.84
LPP-221ENST00000618621 FOSBP53539 338 aa3.58□□□□□ -1.84
LPP-221ENST00000618621 GTPBP4Q9BZE4 634 aaKnown RBP3.58□□□□□ -1.84
LPP-221ENST00000618621 DEF6Q9H4E7 631 aa3.58□□□□□ -1.84
LPP-221ENST00000618621 RDXP35241 583 aaKnown RBP3.58□□□□□ -1.84
LPP-221ENST00000618621 ZRSR2Q15696 482 aaKnown RBP3.58□□□□□ -1.84
LPP-221ENST00000618621 PARD3Q8TEW0 1356 aa3.58□□□□□ -1.84
LPP-221ENST00000618621 KDM4AO75164 1064 aa3.58□□□□□ -1.84
LPP-221ENST00000618621 STK38Q15208 465 aa3.58□□□□□ -1.84
LPP-221ENST00000618621 KIF1BPQ96EK5 621 aa3.58□□□□□ -1.84
LPP-221ENST00000618621 AMOTL2Q9Y2J4 779 aa3.58□□□□□ -1.84
LPP-221ENST00000618621 MAPKBP1O60336 1514 aa3.58□□□□□ -1.84
LPP-221ENST00000618621 PLEKHH1Q9ULM0 1364 aa3.57□□□□□ -1.84
LPP-221ENST00000618621 ZNF445P59923 1031 aa3.57□□□□□ -1.84
LPP-221ENST00000618621 PHAXQ9H814 394 aaKnown RBP3.57□□□□□ -1.84
LPP-221ENST00000618621 ATP2B1P20020 1258 aa3.57□□□□□ -1.84
LPP-221ENST00000618621 CEBPZQ03701 1054 aaKnown RBP3.57□□□□□ -1.84
LPP-221ENST00000618621 NUP62CLQ9H1M0 184 aa3.57□□□□□ -1.84
LPP-221ENST00000618621 CD109Q6YHK3 1445 aa3.57□□□□□ -1.84
LPP-221ENST00000618621 RRS1Q15050 365 aaKnown RBP3.57□□□□□ -1.84
LPP-221ENST00000618621 AMOTQ4VCS5 1084 aa3.57□□□□□ -1.84
LPP-221ENST00000618621 CCDC148Q8NFR7 591 aa3.57□□□□□ -1.84
LPP-221ENST00000618621 BMP2KQ9NSY1 1161 aaPredicted RBP3.57□□□□□ -1.84
LPP-221ENST00000618621 SYNJ1O43426 1573 aa3.57□□□□□ -1.84
LPP-221ENST00000618621 GPRASP1Q5JY77 1395 aa3.57□□□□□ -1.84
LPP-221ENST00000618621 ZNF830Q96NB3 372 aaPredicted RBP3.57□□□□□ -1.84
LPP-221ENST00000618621 CARD14Q9BXL6 1004 aa3.57□□□□□ -1.84
LPP-221ENST00000618621 NOL7Q9UMY1 257 aaKnown RBP3.57□□□□□ -1.84
LPP-221ENST00000618621 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP3.57□□□□□ -1.84
LPP-221ENST00000618621 SDSP20132 328 aa3.57□□□□□ -1.84
LPP-221ENST00000618621 PPP4R3BQ5MIZ7 849 aa3.57□□□□□ -1.84
LPP-221ENST00000618621 TRIM22Q8IYM9 498 aa3.57□□□□□ -1.84
LPP-221ENST00000618621 PPP1R9BQ96SB3 815 aa3.57□□□□□ -1.84
LPP-221ENST00000618621 ZSCAN12O43309 604 aa3.57□□□□□ -1.84
LPP-221ENST00000618621 FGFR1OPO95684 399 aaKnown RBP3.57□□□□□ -1.84
LPP-221ENST00000618621 CASTP20810 708 aaKnown RBP3.57□□□□□ -1.84
LPP-221ENST00000618621 CWC27Q6UX04 472 aaKnown RBP3.57□□□□□ -1.84
LPP-221ENST00000618621 BLOC1S2Q6QNY1 142 aa3.57□□□□□ -1.84
LPP-221ENST00000618621 GAS2L3Q86XJ1 694 aa3.57□□□□□ -1.84
LPP-221ENST00000618621 GPATCH11Q8N954 259 aa3.57□□□□□ -1.84
LPP-221ENST00000618621 RBM42Q9BTD8 480 aaKnown RBP3.57□□□□□ -1.84
LPP-221ENST00000618621 CBX1P83916 185 aa3.57□□□□□ -1.84
LPP-221ENST00000618621 CGNQ9P2M7 1197 aaKnown RBP3.57□□□□□ -1.84
LPP-221ENST00000618621 RGS22Q8NE09 1264 aa3.57□□□□□ -1.84
LPP-221ENST00000618621 NCKAP5LQ9HCH0 1330 aa3.57□□□□□ -1.84
LPP-221ENST00000618621 AXDND1Q5T1B0 1012 aaPredicted RBP3.57□□□□□ -1.84
LPP-221ENST00000618621 TMCO3Q6UWJ1 677 aa3.57□□□□□ -1.84
LPP-221ENST00000618621 SRGAP3O43295 1099 aa3.57□□□□□ -1.84
LPP-221ENST00000618621 TMX3Q96JJ7 454 aa3.57□□□□□ -1.84
LPP-221ENST00000618621 CALCOCO1Q9P1Z2 691 aa3.57□□□□□ -1.84
LPP-221ENST00000618621 CTDP1Q9Y5B0 961 aaPredicted RBP3.57□□□□□ -1.84
LPP-221ENST00000618621 ATP8B2P98198 1209 aa3.57□□□□□ -1.84
LPP-221ENST00000618621 USP48Q86UV5 1035 aa3.57□□□□□ -1.84
LPP-221ENST00000618621 BTBD11A6QL63 1104 aa3.57□□□□□ -1.84
LPP-221ENST00000618621 ANAPC15P60006 121 aa3.57□□□□□ -1.84
LPP-221ENST00000618621 CCDC57Q2TAC2 916 aa3.57□□□□□ -1.84
LPP-221ENST00000618621 SYNJ2O15056 1496 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms