RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 API5Q9BZZ5 524 aaKnown RBP22.15■■□□□ 1.14
CNOT3-209ENST00000617930 UBAP1LF5GYI3 381 aa22.14■■□□□ 1.14
CNOT3-209ENST00000617930 G2E3Q7L622 706 aa22.14■■□□□ 1.14
CNOT3-209ENST00000617930 SIRT2Q8IXJ6 389 aa22.14■■□□□ 1.14
CNOT3-209ENST00000617930 SLC4A2P04920 1241 aa22.13■■□□□ 1.13
CNOT3-209ENST00000617930 PLEKHO1Q53GL0 409 aaPredicted RBP22.13■■□□□ 1.13
CNOT3-209ENST00000617930 LARP1Q6PKG0 1096 aaKnown RBP22.13■■□□□ 1.13
CNOT3-209ENST00000617930 PKD1L3Q7Z443 1732 aa22.12■■□□□ 1.13
CNOT3-209ENST00000617930 ADAMTS7Q9UKP4 1686 aa22.12■■□□□ 1.13
CNOT3-209ENST00000617930 TAF7Q15545 349 aaPredicted RBP22.12■■□□□ 1.13
CNOT3-209ENST00000617930 INTS3Q68E01 1043 aaKnown RBP22.12■■□□□ 1.13
CNOT3-209ENST00000617930 MPRIPQ6WCQ1 1025 aa22.11■■□□□ 1.13
CNOT3-209ENST00000617930 SEC24BO95487 1268 aa22.11■■□□□ 1.13
CNOT3-209ENST00000617930 AKAP4Q5JQC9 854 aa22.11■■□□□ 1.13
CNOT3-209ENST00000617930 STRN4Q9NRL3 753 aa22.11■■□□□ 1.13
CNOT3-209ENST00000617930 COL14A1Q05707 1796 aaKnown RBP22.1■■□□□ 1.13
CNOT3-209ENST00000617930 AMOTQ4VCS5 1084 aa22.1■■□□□ 1.13
CNOT3-209ENST00000617930 RAPGEF4Q8WZA2 1011 aa22.09■■□□□ 1.13
CNOT3-209ENST00000617930 TOM1L2Q6ZVM7 507 aa22.08■■□□□ 1.13
CNOT3-209ENST00000617930 BTG4Q9NY30 223 aa22.08■■□□□ 1.13
CNOT3-209ENST00000617930 OVOS2A0A0G2JMS6 1433 aa22.08■■□□□ 1.12
CNOT3-209ENST00000617930 KDM6AO15550 1401 aaPredicted RBP22.08■■□□□ 1.12
CNOT3-209ENST00000617930 SHANK3Q9BYB0 1731 aa22.08■■□□□ 1.12
CNOT3-209ENST00000617930 SIPA1L3O60292 1781 aaPredicted RBP22.08■■□□□ 1.12
CNOT3-209ENST00000617930 PTPRCP08575 1304 aa22.07■■□□□ 1.12
CNOT3-209ENST00000617930 KDM3BQ7LBC6 1761 aa22.07■■□□□ 1.12
CNOT3-209ENST00000617930 RNMTO43148 476 aaKnown RBP22.07■■□□□ 1.12
CNOT3-209ENST00000617930 KCNQ3O43525 872 aa22.07■■□□□ 1.12
CNOT3-209ENST00000617930 TATP17735 454 aaPredicted RBP22.07■■□□□ 1.12
CNOT3-209ENST00000617930 CERKQ8TCT0 537 aa22.07■■□□□ 1.12
CNOT3-209ENST00000617930 CYP27B1O15528 508 aa22.06■■□□□ 1.12
CNOT3-209ENST00000617930 NECTIN2Q92692 538 aa22.06■■□□□ 1.12
CNOT3-209ENST00000617930 DDRGK1Q96HY6 314 aa22.06■■□□□ 1.12
CNOT3-209ENST00000617930 BABAM1Q9NWV8 329 aa22.06■■□□□ 1.12
CNOT3-209ENST00000617930 PLCH1Q4KWH8 1693 aa22.06■■□□□ 1.12
CNOT3-209ENST00000617930 F6X3S4 739 aa22.06■■□□□ 1.12
CNOT3-209ENST00000617930 NUCB1Q02818 461 aa22.06■■□□□ 1.12
CNOT3-209ENST00000617930 SCN11AQ9UI33 1791 aa22.05■■□□□ 1.12
CNOT3-209ENST00000617930 CARD10Q9BWT7 1032 aa22.05■■□□□ 1.12
CNOT3-209ENST00000617930 PARP4Q9UKK3 1724 aaKnown RBP22.05■■□□□ 1.12
CNOT3-209ENST00000617930 PHKG2P15735 406 aa22.04■■□□□ 1.12
CNOT3-209ENST00000617930 ADAMTS2O95450 1211 aa22.04■■□□□ 1.12
CNOT3-209ENST00000617930 NRAPQ86VF7 1730 aa22.03■■□□□ 1.12
CNOT3-209ENST00000617930 C1orf141Q5JVX7 400 aa22.03■■□□□ 1.12
CNOT3-209ENST00000617930 EIF4A1P60842 406 aaKnown RBP22.02■■□□□ 1.12
CNOT3-209ENST00000617930 MEIS3Q99687 375 aa22.02■■□□□ 1.12
CNOT3-209ENST00000617930 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.02■■□□□ 1.12
CNOT3-209ENST00000617930 CHMP4BQ9H444 224 aaKnown RBP22.01■■□□□ 1.11
CNOT3-209ENST00000617930 ATP10DQ9P241 1426 aa22.01■■□□□ 1.11
CNOT3-209ENST00000617930 NUTM2BA6NNL0 878 aaPredicted RBP22.01■■□□□ 1.11
CNOT3-209ENST00000617930 NUTM2EB1AL46 878 aaPredicted RBP22.01■■□□□ 1.11
CNOT3-209ENST00000617930 EVA1CP58658 441 aa22.01■■□□□ 1.11
CNOT3-209ENST00000617930 NUTM2AQ8IVF1 878 aaPredicted RBP22.01■■□□□ 1.11
CNOT3-209ENST00000617930 LNPKQ9C0E8 428 aa22.01■■□□□ 1.11
CNOT3-209ENST00000617930 USP35Q9P2H5 1018 aa22.01■■□□□ 1.11
CNOT3-209ENST00000617930 CCDC30Q5VVM6 783 aa22■■□□□ 1.11
CNOT3-209ENST00000617930 CHD1LQ86WJ1 897 aa22■■□□□ 1.11
CNOT3-209ENST00000617930 FLIIQ13045 1269 aa21.99■■□□□ 1.11
CNOT3-209ENST00000617930 SPG7Q9UQ90 795 aa21.99■■□□□ 1.11
CNOT3-209ENST00000617930 PLEKHG2Q9H7P9 1386 aa21.99■■□□□ 1.11
CNOT3-209ENST00000617930 SLC4A10Q6U841 1118 aa21.97■■□□□ 1.11
CNOT3-209ENST00000617930 STK31Q9BXU1 1019 aa21.97■■□□□ 1.11
CNOT3-209ENST00000617930 DISP2A7MBM2 1401 aa21.97■■□□□ 1.11
CNOT3-209ENST00000617930 IL2RBP14784 551 aa21.97■■□□□ 1.11
CNOT3-209ENST00000617930 IFNL2Q8IZJ0 200 aa21.97■■□□□ 1.11
CNOT3-209ENST00000617930 GCC1Q96CN9 775 aa21.97■■□□□ 1.11
CNOT3-209ENST00000617930 BTBD11A6QL63 1104 aa21.96■■□□□ 1.11
CNOT3-209ENST00000617930 TEFQ10587 303 aa21.96■■□□□ 1.11
CNOT3-209ENST00000617930 ANKRD45Q5TZF3 282 aa21.96■■□□□ 1.11
CNOT3-209ENST00000617930 CEP85Q6P2H3 762 aa21.96■■□□□ 1.11
CNOT3-209ENST00000617930 PHAXQ9H814 394 aaKnown RBP21.96■■□□□ 1.11
CNOT3-209ENST00000617930 MRC1P22897 1456 aa21.96■■□□□ 1.11
CNOT3-209ENST00000617930 SOS1Q07889 1333 aaPredicted RBP21.96■■□□□ 1.11
CNOT3-209ENST00000617930 ANKRD44Q8N8A2 993 aa21.96■■□□□ 1.11
CNOT3-209ENST00000617930 WNK3Q9BYP7 1800 aa21.95■■□□□ 1.1
CNOT3-209ENST00000617930 HDGFL1Q5TGJ6 251 aa21.95■■□□□ 1.1
CNOT3-209ENST00000617930 LRP6O75581 1613 aa21.94■■□□□ 1.1
CNOT3-209ENST00000617930 ZCRB1Q8TBF4 217 aaKnown RBP21.94■■□□□ 1.1
CNOT3-209ENST00000617930 SLIT2O94813 1529 aa21.94■■□□□ 1.1
CNOT3-209ENST00000617930 TOGARAM1Q9Y4F4 1720 aa21.94■■□□□ 1.1
CNOT3-209ENST00000617930 FKBP5Q13451 457 aaPredicted RBP21.94■■□□□ 1.1
CNOT3-209ENST00000617930 DCTPP1Q9H773 170 aa21.94■■□□□ 1.1
CNOT3-209ENST00000617930 EIF2S2P20042 333 aaKnown RBP21.93■■□□□ 1.1
CNOT3-209ENST00000617930 SLC52A2Q9HAB3 445 aa21.93■■□□□ 1.1
CNOT3-209ENST00000617930 PRAMEF22A3QJZ6 481 aa21.92■■□□□ 1.1
CNOT3-209ENST00000617930 CCT4P50991 539 aaKnown RBP21.92■■□□□ 1.1
CNOT3-209ENST00000617930 SLC39A6Q13433 755 aa21.92■■□□□ 1.1
CNOT3-209ENST00000617930 NFATC2IPQ8NCF5 419 aa21.92■■□□□ 1.1
CNOT3-209ENST00000617930 JCADQ9P266 1359 aa21.92■■□□□ 1.1
CNOT3-209ENST00000617930 HEG1Q9ULI3 1381 aa21.91■■□□□ 1.1
CNOT3-209ENST00000617930 GLI3P10071 1580 aa21.91■■□□□ 1.1
CNOT3-209ENST00000617930 NWD2Q9ULI1 1742 aa21.91■■□□□ 1.1
CNOT3-209ENST00000617930 SLC4A3P48751 1232 aa21.9■■□□□ 1.1
CNOT3-209ENST00000617930 RPAP2Q8IXW5 612 aaPredicted RBP21.9■■□□□ 1.1
CNOT3-209ENST00000617930 DCAF5Q96JK2 942 aa21.9■■□□□ 1.1
CNOT3-209ENST00000617930 CHPF2Q9P2E5 772 aa21.9■■□□□ 1.1
CNOT3-209ENST00000617930 DAXXQ9UER7 740 aaPredicted RBP21.9■■□□□ 1.1
CNOT3-209ENST00000617930 PCDH11XQ9BZA7 1347 aa21.9■■□□□ 1.1
CNOT3-209ENST00000617930 PCDH11YQ9BZA8 1340 aa21.9■■□□□ 1.1
CNOT3-209ENST00000617930 ANXA1P04083 346 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms