RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 RAPGEF4Q8WZA2 1011 aa21.83■■□□□ 1.09
PCDHGC3-205ENST00000617641 SOS2Q07890 1332 aaPredicted RBP21.83■■□□□ 1.09
PCDHGC3-205ENST00000617641 CPDO75976 1380 aa21.83■■□□□ 1.09
PCDHGC3-205ENST00000617641 BTBD11A6QL63 1104 aa21.83■■□□□ 1.08
PCDHGC3-205ENST00000617641 ABCC6O95255 1503 aa21.82■■□□□ 1.08
PCDHGC3-205ENST00000617641 NUCB1Q02818 461 aa21.82■■□□□ 1.08
PCDHGC3-205ENST00000617641 FLIIQ13045 1269 aa21.82■■□□□ 1.08
PCDHGC3-205ENST00000617641 SLC4A10Q6U841 1118 aa21.82■■□□□ 1.08
PCDHGC3-205ENST00000617641 OVOS2A0A0G2JMS6 1433 aa21.81■■□□□ 1.08
PCDHGC3-205ENST00000617641 HDGFL1Q5TGJ6 251 aa21.81■■□□□ 1.08
PCDHGC3-205ENST00000617641 MEGF6O75095 1541 aa21.81■■□□□ 1.08
PCDHGC3-205ENST00000617641 MEIS3Q99687 375 aa21.8■■□□□ 1.08
PCDHGC3-205ENST00000617641 TATP17735 454 aaPredicted RBP21.79■■□□□ 1.08
PCDHGC3-205ENST00000617641 FKBP5Q13451 457 aaPredicted RBP21.79■■□□□ 1.08
PCDHGC3-205ENST00000617641 GCC1Q96CN9 775 aa21.79■■□□□ 1.08
PCDHGC3-205ENST00000617641 LNPKQ9C0E8 428 aa21.79■■□□□ 1.08
PCDHGC3-205ENST00000617641 CACNA1FO60840 1977 aa21.79■■□□□ 1.08
PCDHGC3-205ENST00000617641 NOP58Q9Y2X3 529 aaKnown RBP21.79■■□□□ 1.08
PCDHGC3-205ENST00000617641 EIF2S2P20042 333 aaKnown RBP21.78■■□□□ 1.08
PCDHGC3-205ENST00000617641 ERICH6Q7L0X2 663 aa21.78■■□□□ 1.08
PCDHGC3-205ENST00000617641 CHD1LQ86WJ1 897 aa21.78■■□□□ 1.08
PCDHGC3-205ENST00000617641 ATP10DQ9P241 1426 aa21.78■■□□□ 1.08
PCDHGC3-205ENST00000617641 CCT4P50991 539 aaKnown RBP21.78■■□□□ 1.08
PCDHGC3-205ENST00000617641 ADAMTS7Q9UKP4 1686 aa21.77■■□□□ 1.08
PCDHGC3-205ENST00000617641 SIPA1L3O60292 1781 aaPredicted RBP21.77■■□□□ 1.08
PCDHGC3-205ENST00000617641 ANKRD45Q5TZF3 282 aa21.77■■□□□ 1.07
PCDHGC3-205ENST00000617641 PRDM11Q9NQV5 511 aa21.77■■□□□ 1.07
PCDHGC3-205ENST00000617641 SEC24BO95487 1268 aa21.76■■□□□ 1.07
PCDHGC3-205ENST00000617641 HOXB7P09629 217 aa21.75■■□□□ 1.07
PCDHGC3-205ENST00000617641 ANKRD44Q8N8A2 993 aa21.75■■□□□ 1.07
PCDHGC3-205ENST00000617641 SPG7Q9UQ90 795 aa21.75■■□□□ 1.07
PCDHGC3-205ENST00000617641 PHAXQ9H814 394 aaKnown RBP21.75■■□□□ 1.07
PCDHGC3-205ENST00000617641 ZBTB47Q9UFB7 747 aaPredicted RBP21.75■■□□□ 1.07
PCDHGC3-205ENST00000617641 CEP85Q6P2H3 762 aa21.74■■□□□ 1.07
PCDHGC3-205ENST00000617641 KDM6AO15550 1401 aaPredicted RBP21.74■■□□□ 1.07
PCDHGC3-205ENST00000617641 PHKG2P15735 406 aa21.74■■□□□ 1.07
PCDHGC3-205ENST00000617641 ABCA3Q99758 1704 aa21.74■■□□□ 1.07
PCDHGC3-205ENST00000617641 NHSL1Q5SYE7 1610 aa21.73■■□□□ 1.07
PCDHGC3-205ENST00000617641 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.73■■□□□ 1.07
PCDHGC3-205ENST00000617641 CHPF2Q9P2E5 772 aa21.73■■□□□ 1.07
PCDHGC3-205ENST00000617641 RPAP2Q8IXW5 612 aaPredicted RBP21.73■■□□□ 1.07
PCDHGC3-205ENST00000617641 SCN11AQ9UI33 1791 aa21.72■■□□□ 1.07
PCDHGC3-205ENST00000617641 ANP32EQ9BTT0 268 aa21.72■■□□□ 1.07
PCDHGC3-205ENST00000617641 DCTPP1Q9H773 170 aa21.71■■□□□ 1.07
PCDHGC3-205ENST00000617641 IFNL2Q8IZJ0 200 aa21.71■■□□□ 1.07
PCDHGC3-205ENST00000617641 PKD1L3Q7Z443 1732 aa21.7■■□□□ 1.06
PCDHGC3-205ENST00000617641 HEG1Q9ULI3 1381 aa21.7■■□□□ 1.06
PCDHGC3-205ENST00000617641 N4BP2Q86UW6 1770 aaPredicted RBP21.7■■□□□ 1.06
PCDHGC3-205ENST00000617641 CYP27B1O15528 508 aa21.69■■□□□ 1.06
PCDHGC3-205ENST00000617641 GIGYF1O75420 1035 aaPredicted RBP21.69■■□□□ 1.06
PCDHGC3-205ENST00000617641 ANXA1P04083 346 aa21.69■■□□□ 1.06
PCDHGC3-205ENST00000617641 SLC52A2Q9HAB3 445 aa21.69■■□□□ 1.06
PCDHGC3-205ENST00000617641 WDR17Q8IZU2 1322 aa21.69■■□□□ 1.06
PCDHGC3-205ENST00000617641 PXDNLA1KZ92 1463 aa21.69■■□□□ 1.06
PCDHGC3-205ENST00000617641 PRAMEF22A3QJZ6 481 aa21.69■■□□□ 1.06
PCDHGC3-205ENST00000617641 COL5A2P05997 1499 aaPredicted RBP21.69■■□□□ 1.06
PCDHGC3-205ENST00000617641 CHMP4AQ9BY43 222 aa21.68■■□□□ 1.06
PCDHGC3-205ENST00000617641 TOM1L2Q6ZVM7 507 aa21.68■■□□□ 1.06
PCDHGC3-205ENST00000617641 DDRGK1Q96HY6 314 aa21.68■■□□□ 1.06
PCDHGC3-205ENST00000617641 PLEKHG2Q9H7P9 1386 aa21.68■■□□□ 1.06
PCDHGC3-205ENST00000617641 SLC39A6Q13433 755 aa21.67■■□□□ 1.06
PCDHGC3-205ENST00000617641 GNAI2P04899 355 aa21.67■■□□□ 1.06
PCDHGC3-205ENST00000617641 NFATC2IPQ8NCF5 419 aa21.67■■□□□ 1.06
PCDHGC3-205ENST00000617641 GNAI3P08754 354 aa21.65■■□□□ 1.06
PCDHGC3-205ENST00000617641 ZNF790Q6PG37 636 aa21.65■■□□□ 1.06
PCDHGC3-205ENST00000617641 DCAF5Q96JK2 942 aa21.65■■□□□ 1.06
PCDHGC3-205ENST00000617641 DBF4Q9UBU7 674 aaPredicted RBP21.65■■□□□ 1.06
PCDHGC3-205ENST00000617641 PROSER3Q2NL68 480 aa21.64■■□□□ 1.05
PCDHGC3-205ENST00000617641 PARP4Q9UKK3 1724 aaKnown RBP21.63■■□□□ 1.05
PCDHGC3-205ENST00000617641 MRC1P22897 1456 aa21.63■■□□□ 1.05
PCDHGC3-205ENST00000617641 PI4KAP2A4QPH2 592 aa21.63■■□□□ 1.05
PCDHGC3-205ENST00000617641 HMMRO75330 724 aa21.63■■□□□ 1.05
PCDHGC3-205ENST00000617641 PI4KAP1Q8N8J0 262 aa21.63■■□□□ 1.05
PCDHGC3-205ENST00000617641 USP44Q9H0E7 712 aa21.63■■□□□ 1.05
PCDHGC3-205ENST00000617641 STRN4Q9NRL3 753 aa21.63■■□□□ 1.05
PCDHGC3-205ENST00000617641 APBB1O00213 710 aa21.62■■□□□ 1.05
PCDHGC3-205ENST00000617641 DNAAF4Q8WXU2 420 aa21.62■■□□□ 1.05
PCDHGC3-205ENST00000617641 SRCIN1Q9C0H9 1055 aa21.62■■□□□ 1.05
PCDHGC3-205ENST00000617641 HSP90AB1P08238 724 aaKnown RBP21.61■■□□□ 1.05
PCDHGC3-205ENST00000617641 BMP2KLQ5H9B9 411 aa21.61■■□□□ 1.05
PCDHGC3-205ENST00000617641 LRRFIP2Q9Y608 721 aaKnown RBP21.61■■□□□ 1.05
PCDHGC3-205ENST00000617641 ADCY9O60503 1353 aa21.61■■□□□ 1.05
PCDHGC3-205ENST00000617641 C5P01031 1676 aa21.61■■□□□ 1.05
PCDHGC3-205ENST00000617641 LARP1Q6PKG0 1096 aaKnown RBP21.61■■□□□ 1.05
PCDHGC3-205ENST00000617641 UPF2Q9HAU5 1272 aaKnown RBP21.61■■□□□ 1.05
PCDHGC3-205ENST00000617641 C16orf71Q8IYS4 520 aaPredicted RBP21.6■■□□□ 1.05
PCDHGC3-205ENST00000617641 CARD10Q9BWT7 1032 aa21.6■■□□□ 1.05
PCDHGC3-205ENST00000617641 SMARCA5O60264 1052 aaPredicted RBP21.6■■□□□ 1.05
PCDHGC3-205ENST00000617641 BEND3Q5T5X7 828 aa21.6■■□□□ 1.05
PCDHGC3-205ENST00000617641 ZCRB1Q8TBF4 217 aaKnown RBP21.6■■□□□ 1.05
PCDHGC3-205ENST00000617641 UBTFL1P0CB47 393 aaPredicted RBP21.59■■□□□ 1.05
PCDHGC3-205ENST00000617641 EVA1CP58658 441 aa21.59■■□□□ 1.05
PCDHGC3-205ENST00000617641 PLEKHM2Q8IWE5 1019 aa21.59■■□□□ 1.05
PCDHGC3-205ENST00000617641 ROBO1Q9Y6N7 1651 aa21.59■■□□□ 1.05
PCDHGC3-205ENST00000617641 ZNF496Q96IT1 587 aaPredicted RBP21.58■■□□□ 1.05
PCDHGC3-205ENST00000617641 PCDH11XQ9BZA7 1347 aa21.58■■□□□ 1.05
PCDHGC3-205ENST00000617641 PCDH11YQ9BZA8 1340 aa21.58■■□□□ 1.05
PCDHGC3-205ENST00000617641 PNMA6EA0A0J9YXQ4 647 aa21.58■■□□□ 1.04
PCDHGC3-205ENST00000617641 SLC4A3P48751 1232 aa21.58■■□□□ 1.04
PCDHGC3-205ENST00000617641 CABP4P57796 275 aa21.58■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms