RNA–Protein interactions for RNA: ENST00000617548.1

ACACA-239, Transcript of acetyl-CoA carboxylase alpha, humanhuman

TSL 1 (best)

Gene ACACA, Length 1,063 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACACA-239ENST00000617548 RBM42Q9BTD8 480 aaKnown RBP30.92■■■□□ 2.54
ACACA-239ENST00000617548 C4BP0C0L5 1744 aa30.91■■■□□ 2.54
ACACA-239ENST00000617548 SCN11AQ9UI33 1791 aa30.9■■■□□ 2.54
ACACA-239ENST00000617548 DDX10Q13206 875 aaKnown RBP30.9■■■□□ 2.54
ACACA-239ENST00000617548 COL23A1Q86Y22 540 aaPredicted RBP30.89■■■□□ 2.54
ACACA-239ENST00000617548 LINC00116Q8NCU8 138 aa30.89■■■□□ 2.54
ACACA-239ENST00000617548 FLAD1Q8NFF5 587 aa30.88■■■□□ 2.53
ACACA-239ENST00000617548 SGIP1Q9BQI5 828 aa30.88■■■□□ 2.53
ACACA-239ENST00000617548 LGR6Q9HBX8 967 aa30.88■■■□□ 2.53
ACACA-239ENST00000617548 U2AF1L5P0DN76 240 aaPredicted RBP30.87■■■□□ 2.53
ACACA-239ENST00000617548 ZEB1P37275 1124 aaPredicted RBP30.87■■■□□ 2.53
ACACA-239ENST00000617548 U2AF1Q01081 240 aaKnown RBP eCLIP30.87■■■□□ 2.53
ACACA-239ENST00000617548 ITPK1Q13572 414 aa30.87■■■□□ 2.53
ACACA-239ENST00000617548 RNMTO43148 476 aaKnown RBP30.86■■■□□ 2.53
ACACA-239ENST00000617548 POLD1P28340 1107 aa30.86■■■□□ 2.53
ACACA-239ENST00000617548 ARXQ96QS3 562 aa30.86■■■□□ 2.53
ACACA-239ENST00000617548 GAS2L2Q8NHY3 880 aa30.85■■■□□ 2.53
ACACA-239ENST00000617548 SLC52A2Q9HAB3 445 aa30.85■■■□□ 2.53
ACACA-239ENST00000617548 PTCD1O75127 700 aaKnown RBP30.84■■■□□ 2.53
ACACA-239ENST00000617548 PHF14O94880 888 aa30.84■■■□□ 2.53
ACACA-239ENST00000617548 PRKAR2BP31323 418 aa30.84■■■□□ 2.53
ACACA-239ENST00000617548 RSPH6AQ9H0K4 717 aa30.83■■■□□ 2.53
ACACA-239ENST00000617548 VIRMAQ69YN4 1812 aaKnown RBP30.82■■■□□ 2.52
ACACA-239ENST00000617548 GNPATO15228 680 aa30.81■■■□□ 2.52
ACACA-239ENST00000617548 SLC4A9Q96Q91 983 aa30.81■■■□□ 2.52
ACACA-239ENST00000617548 FHDC1Q9C0D6 1143 aaPredicted RBP30.81■■■□□ 2.52
ACACA-239ENST00000617548 GNAT3A8MTJ3 354 aa30.8■■■□□ 2.52
ACACA-239ENST00000617548 MAP3K5Q99683 1374 aa30.79■■■□□ 2.52
ACACA-239ENST00000617548 UBR3Q6ZT12 1888 aa30.79■■■□□ 2.52
ACACA-239ENST00000617548 ZNF831Q5JPB2 1677 aa30.79■■■□□ 2.52
ACACA-239ENST00000617548 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.79■■■□□ 2.52
ACACA-239ENST00000617548 SMIM5Q71RC9 77 aa30.79■■■□□ 2.52
ACACA-239ENST00000617548 PHACTR3Q96KR7 559 aa30.79■■■□□ 2.52
ACACA-239ENST00000617548 DCAF8L1A6NGE4 600 aa30.78■■■□□ 2.52
ACACA-239ENST00000617548 FCHSD2O94868 740 aa30.78■■■□□ 2.52
ACACA-239ENST00000617548 SSFA2P28290 1259 aa30.78■■■□□ 2.52
ACACA-239ENST00000617548 RALBP1Q15311 655 aa30.78■■■□□ 2.52
ACACA-239ENST00000617548 MSL1Q68DK7 614 aa30.78■■■□□ 2.52
ACACA-239ENST00000617548 AMIGO3Q86WK7 504 aa30.78■■■□□ 2.52
ACACA-239ENST00000617548 MRC1P22897 1456 aa30.77■■■□□ 2.52
ACACA-239ENST00000617548 SYT17Q9BSW7 474 aa30.76■■■□□ 2.51
ACACA-239ENST00000617548 COL24A1Q17RW2 1714 aa30.76■■■□□ 2.51
ACACA-239ENST00000617548 ADAMTS7Q9UKP4 1686 aa30.75■■■□□ 2.51
ACACA-239ENST00000617548 KLHL34Q8N239 644 aa30.75■■■□□ 2.51
ACACA-239ENST00000617548 TEFQ10587 303 aa30.74■■■□□ 2.51
ACACA-239ENST00000617548 SLC39A6Q13433 755 aa30.74■■■□□ 2.51
ACACA-239ENST00000617548 RTCBQ9Y3I0 505 aaKnown RBP30.74■■■□□ 2.51
ACACA-239ENST00000617548 COL5A3P25940 1745 aaPredicted RBP30.73■■■□□ 2.51
ACACA-239ENST00000617548 RC3H1Q5TC82 1133 aaKnown RBP30.72■■■□□ 2.51
ACACA-239ENST00000617548 IL17REQ8NFR9 667 aa30.72■■■□□ 2.51
ACACA-239ENST00000617548 CNTNAP4Q9C0A0 1308 aa30.72■■■□□ 2.51
ACACA-239ENST00000617548 NEFMP07197 916 aa30.7■■■□□ 2.51
ACACA-239ENST00000617548 TRAPPC3LQ5T215 181 aa30.7■■■□□ 2.51
ACACA-239ENST00000617548 TTC5Q8N0Z6 440 aa30.68■■■□□ 2.5
ACACA-239ENST00000617548 CRKLP46109 303 aaKnown RBP30.67■■■□□ 2.5
ACACA-239ENST00000617548 RTF1Q92541 710 aaKnown RBP30.67■■■□□ 2.5
ACACA-239ENST00000617548 RPS6KA4O75676 772 aa30.66■■■□□ 2.5
ACACA-239ENST00000617548 TJP1Q07157 1748 aa30.66■■■□□ 2.5
ACACA-239ENST00000617548 DNAJC10Q8IXB1 793 aa30.65■■■□□ 2.5
ACACA-239ENST00000617548 ADRA2BP18089 450 aa30.64■■■□□ 2.5
ACACA-239ENST00000617548 MYBBP1AQ9BQG0 1328 aaKnown RBP30.64■■■□□ 2.5
ACACA-239ENST00000617548 KCPQ6ZWJ8 1503 aa30.63■■■□□ 2.49
ACACA-239ENST00000617548 CICQ96RK0 1608 aaPredicted RBP30.63■■■□□ 2.49
ACACA-239ENST00000617548 RFC4P35249 363 aa30.63■■■□□ 2.49
ACACA-239ENST00000617548 ARHGEF1Q92888 912 aaKnown RBP30.63■■■□□ 2.49
ACACA-239ENST00000617548 PNNQ9H307 717 aaKnown RBP30.63■■■□□ 2.49
ACACA-239ENST00000617548 CEMIPQ8WUJ3 1361 aa30.63■■■□□ 2.49
ACACA-239ENST00000617548 MYH14Q7Z406 1995 aaKnown RBP30.63■■■□□ 2.49
ACACA-239ENST00000617548 MCM10Q7L590 875 aa30.61■■■□□ 2.49
ACACA-239ENST00000617548 SIPA1L3O60292 1781 aaPredicted RBP30.6■■■□□ 2.49
ACACA-239ENST00000617548 ZNF790Q6PG37 636 aa30.6■■■□□ 2.49
ACACA-239ENST00000617548 VSIG10Q8N0Z9 540 aa30.6■■■□□ 2.49
ACACA-239ENST00000617548 CCDC87Q9NVE4 849 aa30.6■■■□□ 2.49
ACACA-239ENST00000617548 BTBD11A6QL63 1104 aa30.59■■■□□ 2.49
ACACA-239ENST00000617548 INTS5Q6P9B9 1019 aaKnown RBP30.59■■■□□ 2.49
ACACA-239ENST00000617548 UBR2Q8IWV8 1755 aa30.59■■■□□ 2.49
ACACA-239ENST00000617548 HTATSF1O43719 755 aaKnown RBP30.58■■■□□ 2.49
ACACA-239ENST00000617548 CYP19A1P11511 503 aaPredicted RBP30.58■■■□□ 2.49
ACACA-239ENST00000617548 MAPK8IP3Q9UPT6 1336 aa30.57■■■□□ 2.48
ACACA-239ENST00000617548 PLEKHF1Q96S99 279 aa30.57■■■□□ 2.48
ACACA-239ENST00000617548 DCTN1Q14203 1278 aa30.56■■■□□ 2.48
ACACA-239ENST00000617548 NLGN1Q8N2Q7 840 aa30.56■■■□□ 2.48
ACACA-239ENST00000617548 NLGN2Q8NFZ4 835 aa30.56■■■□□ 2.48
ACACA-239ENST00000617548 ZNF496Q96IT1 587 aaPredicted RBP30.56■■■□□ 2.48
ACACA-239ENST00000617548 FMNL2Q96PY5 1086 aa30.54■■■□□ 2.48
ACACA-239ENST00000617548 STARD3NLO95772 234 aa30.53■■■□□ 2.48
ACACA-239ENST00000617548 MMP10P09238 476 aa30.53■■■□□ 2.48
ACACA-239ENST00000617548 PELP1Q8IZL8 1130 aaKnown RBP30.53■■■□□ 2.48
ACACA-239ENST00000617548 CD2APQ9Y5K6 639 aa30.53■■■□□ 2.48
ACACA-239ENST00000617548 C4AP0C0L4 1744 aa30.53■■■□□ 2.48
ACACA-239ENST00000617548 HEG1Q9ULI3 1381 aa30.53■■■□□ 2.48
ACACA-239ENST00000617548 GYS1P13807 737 aa30.52■■■□□ 2.48
ACACA-239ENST00000617548 NFE2L2Q16236 605 aa30.52■■■□□ 2.48
ACACA-239ENST00000617548 GPR162Q16538 588 aa30.52■■■□□ 2.48
ACACA-239ENST00000617548 PRKRIP1Q9H875 184 aaPredicted RBP30.52■■■□□ 2.48
ACACA-239ENST00000617548 TEX13AQ9BXU3 409 aaPredicted RBP30.51■■■□□ 2.47
ACACA-239ENST00000617548 KCNQ3O43525 872 aa30.5■■■□□ 2.47
ACACA-239ENST00000617548 SRP68Q9UHB9 627 aaKnown RBP30.5■■■□□ 2.47
ACACA-239ENST00000617548 ZBTB1Q9Y2K1 713 aa30.5■■■□□ 2.47
ACACA-239ENST00000617548 SOS1Q07889 1333 aaPredicted RBP30.49■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms