RNA–Protein interactions for RNA: ENST00000616795.1

CCDC113-206, Transcript of coiled-coil domain containing 113, humanhuman

TSL 5 BASIC

Gene CCDC113, Length 891 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-206ENST00000616795 SGIP1Q9BQI5 828 aa18.32■□□□□ 0.52
CCDC113-206ENST00000616795 MRC1P22897 1456 aa18.32■□□□□ 0.52
CCDC113-206ENST00000616795 COL5A3P25940 1745 aaPredicted RBP18.32■□□□□ 0.52
CCDC113-206ENST00000616795 ITPK1Q13572 414 aa18.31■□□□□ 0.52
CCDC113-206ENST00000616795 LINC00116Q8NCU8 138 aa18.31■□□□□ 0.52
CCDC113-206ENST00000616795 LGR6Q9HBX8 967 aa18.31■□□□□ 0.52
CCDC113-206ENST00000616795 NFATC2IPQ8NCF5 419 aa18.3■□□□□ 0.52
CCDC113-206ENST00000616795 SLC4A9Q96Q91 983 aa18.3■□□□□ 0.52
CCDC113-206ENST00000616795 RSPH6AQ9H0K4 717 aa18.3■□□□□ 0.52
CCDC113-206ENST00000616795 PPP1R1BQ9UD71 204 aaPredicted RBP18.3■□□□□ 0.52
CCDC113-206ENST00000616795 RNMTO43148 476 aaKnown RBP18.29■□□□□ 0.52
CCDC113-206ENST00000616795 AMIGO3Q86WK7 504 aa18.29■□□□□ 0.52
CCDC113-206ENST00000616795 COL23A1Q86Y22 540 aaPredicted RBP18.29■□□□□ 0.52
CCDC113-206ENST00000616795 PRKAR2BP31323 418 aa18.28■□□□□ 0.52
CCDC113-206ENST00000616795 ATP6V1AP38606 617 aa18.28■□□□□ 0.52
CCDC113-206ENST00000616795 NUDCQ9Y266 331 aa18.28■□□□□ 0.52
CCDC113-206ENST00000616795 TJP1Q07157 1748 aa18.28■□□□□ 0.52
CCDC113-206ENST00000616795 SIPA1L3O60292 1781 aaPredicted RBP18.27■□□□□ 0.52
CCDC113-206ENST00000616795 ZEB1P37275 1124 aaPredicted RBP18.27■□□□□ 0.52
CCDC113-206ENST00000616795 SMIM5Q71RC9 77 aa18.27■□□□□ 0.52
CCDC113-206ENST00000616795 SLC16A10Q8TF71 515 aa18.27■□□□□ 0.52
CCDC113-206ENST00000616795 PHACTR3Q96KR7 559 aa18.27■□□□□ 0.52
CCDC113-206ENST00000616795 RBM42Q9BTD8 480 aaKnown RBP18.27■□□□□ 0.52
CCDC113-206ENST00000616795 SLC52A2Q9HAB3 445 aa18.27■□□□□ 0.52
CCDC113-206ENST00000616795 MYH14Q7Z406 1995 aaKnown RBP18.27■□□□□ 0.52
CCDC113-206ENST00000616795 CICQ96RK0 1608 aaPredicted RBP18.27■□□□□ 0.51
CCDC113-206ENST00000616795 U2AF1L5P0DN76 240 aaPredicted RBP18.26■□□□□ 0.51
CCDC113-206ENST00000616795 U2AF1Q01081 240 aaKnown RBP eCLIP18.26■□□□□ 0.51
CCDC113-206ENST00000616795 AK7Q96M32 723 aa18.26■□□□□ 0.51
CCDC113-206ENST00000616795 MAP3K5Q99683 1374 aa18.26■□□□□ 0.51
CCDC113-206ENST00000616795 HMGB2P26583 209 aaKnown RBP18.25■□□□□ 0.51
CCDC113-206ENST00000616795 GAS2L2Q8NHY3 880 aa18.25■□□□□ 0.51
CCDC113-206ENST00000616795 MSH5O43196 834 aa18.24■□□□□ 0.51
CCDC113-206ENST00000616795 UBR2Q8IWV8 1755 aa18.24■□□□□ 0.51
CCDC113-206ENST00000616795 PTCD1O75127 700 aaKnown RBP18.23■□□□□ 0.51
CCDC113-206ENST00000616795 RALBP1Q15311 655 aa18.23■□□□□ 0.51
CCDC113-206ENST00000616795 KCPQ6ZWJ8 1503 aa18.23■□□□□ 0.51
CCDC113-206ENST00000616795 DLG5Q8TDM6 1919 aa18.22■□□□□ 0.51
CCDC113-206ENST00000616795 GNAT3A8MTJ3 354 aa18.22■□□□□ 0.51
CCDC113-206ENST00000616795 FCHSD2O94868 740 aa18.22■□□□□ 0.51
CCDC113-206ENST00000616795 PHF14O94880 888 aa18.22■□□□□ 0.51
CCDC113-206ENST00000616795 SLC39A6Q13433 755 aa18.22■□□□□ 0.51
CCDC113-206ENST00000616795 IL17REQ8NFR9 667 aa18.22■□□□□ 0.51
CCDC113-206ENST00000616795 ARXQ96QS3 562 aa18.22■□□□□ 0.51
CCDC113-206ENST00000616795 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.21■□□□□ 0.51
CCDC113-206ENST00000616795 GNPATO15228 680 aa18.21■□□□□ 0.51
CCDC113-206ENST00000616795 MSL1Q68DK7 614 aa18.21■□□□□ 0.51
CCDC113-206ENST00000616795 FLAD1Q8NFF5 587 aa18.21■□□□□ 0.51
CCDC113-206ENST00000616795 FHDC1Q9C0D6 1143 aaPredicted RBP18.21■□□□□ 0.51
CCDC113-206ENST00000616795 SSFA2P28290 1259 aa18.2■□□□□ 0.5
CCDC113-206ENST00000616795 C4AP0C0L4 1744 aa18.2■□□□□ 0.5
CCDC113-206ENST00000616795 CNTNAP4Q9C0A0 1308 aa18.2■□□□□ 0.5
CCDC113-206ENST00000616795 POLD1P28340 1107 aa18.19■□□□□ 0.5
CCDC113-206ENST00000616795 CEMIPQ8WUJ3 1361 aa18.18■□□□□ 0.5
CCDC113-206ENST00000616795 SYT17Q9BSW7 474 aa18.18■□□□□ 0.5
CCDC113-206ENST00000616795 RC3H1Q5TC82 1133 aaKnown RBP18.17■□□□□ 0.5
CCDC113-206ENST00000616795 MYBBP1AQ9BQG0 1328 aaKnown RBP18.17■□□□□ 0.5
CCDC113-206ENST00000616795 DNAJC10Q8IXB1 793 aa18.16■□□□□ 0.5
CCDC113-206ENST00000616795 RPS6KA4O75676 772 aa18.15■□□□□ 0.5
CCDC113-206ENST00000616795 CRKLP46109 303 aaKnown RBP18.15■□□□□ 0.5
CCDC113-206ENST00000616795 TEFQ10587 303 aa18.15■□□□□ 0.5
CCDC113-206ENST00000616795 PLEKHF1Q96S99 279 aa18.15■□□□□ 0.5
CCDC113-206ENST00000616795 RTCBQ9Y3I0 505 aaKnown RBP18.15■□□□□ 0.5
CCDC113-206ENST00000616795 MCM10Q7L590 875 aa18.14■□□□□ 0.49
CCDC113-206ENST00000616795 DCTN1Q14203 1278 aa18.13■□□□□ 0.49
CCDC113-206ENST00000616795 TRAPPC3LQ5T215 181 aa18.13■□□□□ 0.49
CCDC113-206ENST00000616795 INTS5Q6P9B9 1019 aaKnown RBP18.13■□□□□ 0.49
CCDC113-206ENST00000616795 KLHL34Q8N239 644 aa18.13■□□□□ 0.49
CCDC113-206ENST00000616795 ARHGEF1Q92888 912 aaKnown RBP18.13■□□□□ 0.49
CCDC113-206ENST00000616795 PRKRIP1Q9H875 184 aaPredicted RBP18.12■□□□□ 0.49
CCDC113-206ENST00000616795 KCNQ3O43525 872 aa18.11■□□□□ 0.49
CCDC113-206ENST00000616795 CYP19A1P11511 503 aaPredicted RBP18.11■□□□□ 0.49
CCDC113-206ENST00000616795 ADRA2BP18089 450 aa18.11■□□□□ 0.49
CCDC113-206ENST00000616795 ZNF790Q6PG37 636 aa18.11■□□□□ 0.49
CCDC113-206ENST00000616795 TTC5Q8N0Z6 440 aa18.11■□□□□ 0.49
CCDC113-206ENST00000616795 VSIG10Q8N0Z9 540 aa18.11■□□□□ 0.49
CCDC113-206ENST00000616795 RTF1Q92541 710 aaKnown RBP18.11■□□□□ 0.49
CCDC113-206ENST00000616795 ZNF496Q96IT1 587 aaPredicted RBP18.11■□□□□ 0.49
CCDC113-206ENST00000616795 HEG1Q9ULI3 1381 aa18.1■□□□□ 0.49
CCDC113-206ENST00000616795 NLGN2Q8NFZ4 835 aa18.1■□□□□ 0.49
CCDC113-206ENST00000616795 BTBD11A6QL63 1104 aa18.09■□□□□ 0.49
CCDC113-206ENST00000616795 HTATSF1O43719 755 aaKnown RBP18.09■□□□□ 0.49
CCDC113-206ENST00000616795 CCDC87Q9NVE4 849 aa18.09■□□□□ 0.49
CCDC113-206ENST00000616795 SOS1Q07889 1333 aaPredicted RBP18.08■□□□□ 0.49
CCDC113-206ENST00000616795 NEFMP07197 916 aa18.08■□□□□ 0.48
CCDC113-206ENST00000616795 RFC4P35249 363 aa18.08■□□□□ 0.48
CCDC113-206ENST00000616795 NFE2L2Q16236 605 aa18.08■□□□□ 0.48
CCDC113-206ENST00000616795 ZBTB1Q9Y2K1 713 aa18.08■□□□□ 0.48
CCDC113-206ENST00000616795 KDM3BQ7LBC6 1761 aa18.08■□□□□ 0.48
CCDC113-206ENST00000616795 MAPK8IP3Q9UPT6 1336 aa18.07■□□□□ 0.48
CCDC113-206ENST00000616795 ZNF316A6NFI3 1004 aaPredicted RBP18.07■□□□□ 0.48
CCDC113-206ENST00000616795 GYS1P13807 737 aa18.07■□□□□ 0.48
CCDC113-206ENST00000616795 SRP68Q9UHB9 627 aaKnown RBP18.07■□□□□ 0.48
CCDC113-206ENST00000616795 FMNL2Q96PY5 1086 aa18.06■□□□□ 0.48
CCDC113-206ENST00000616795 PNNQ9H307 717 aaKnown RBP18.06■□□□□ 0.48
CCDC113-206ENST00000616795 KIF13BQ9NQT8 1826 aa18.06■□□□□ 0.48
CCDC113-206ENST00000616795 UTRNP46939 3433 aa18.06■□□□□ 0.48
CCDC113-206ENST00000616795 USP42Q9H9J4 1324 aaKnown RBP18.05■□□□□ 0.48
CCDC113-206ENST00000616795 MMP10P09238 476 aa18.05■□□□□ 0.48
CCDC113-206ENST00000616795 THUMPD2Q9BTF0 503 aaKnown RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms