RNA–Protein interactions for RNA: ENST00000616789.4

UPK1A-203, Transcript of uroplakin 1A, humanhuman

TSL 5 BASIC

Gene UPK1A, Length 1,366 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-203ENST00000616789 ITPK1Q13572 414 aa18.39■□□□□ 0.53
UPK1A-203ENST00000616789 RALBP1Q15311 655 aa18.39■□□□□ 0.53
UPK1A-203ENST00000616789 SGIP1Q9BQI5 828 aa18.39■□□□□ 0.53
UPK1A-203ENST00000616789 FCHSD2O94868 740 aa18.38■□□□□ 0.53
UPK1A-203ENST00000616789 AMIGO3Q86WK7 504 aa18.38■□□□□ 0.53
UPK1A-203ENST00000616789 C4BP0C0L5 1744 aa18.37■□□□□ 0.53
UPK1A-203ENST00000616789 PRKAR2BP31323 418 aa18.37■□□□□ 0.53
UPK1A-203ENST00000616789 CABP4P57796 275 aa18.37■□□□□ 0.53
UPK1A-203ENST00000616789 IL17REQ8NFR9 667 aa18.37■□□□□ 0.53
UPK1A-203ENST00000616789 NUDCQ9Y266 331 aa18.37■□□□□ 0.53
UPK1A-203ENST00000616789 ZBTB7AO95365 584 aa18.36■□□□□ 0.53
UPK1A-203ENST00000616789 LINC00116Q8NCU8 138 aa18.36■□□□□ 0.53
UPK1A-203ENST00000616789 SLC52A2Q9HAB3 445 aa18.36■□□□□ 0.53
UPK1A-203ENST00000616789 SPON1Q9HCB6 807 aa18.36■□□□□ 0.53
UPK1A-203ENST00000616789 U2AF1L5P0DN76 240 aaPredicted RBP18.35■□□□□ 0.53
UPK1A-203ENST00000616789 U2AF1Q01081 240 aaKnown RBP eCLIP18.35■□□□□ 0.53
UPK1A-203ENST00000616789 UBR3Q6ZT12 1888 aa18.35■□□□□ 0.53
UPK1A-203ENST00000616789 COL23A1Q86Y22 540 aaPredicted RBP18.34■□□□□ 0.53
UPK1A-203ENST00000616789 PLEKHF1Q96S99 279 aa18.34■□□□□ 0.53
UPK1A-203ENST00000616789 SIPA1L3O60292 1781 aaPredicted RBP18.34■□□□□ 0.53
UPK1A-203ENST00000616789 COL5A3P25940 1745 aaPredicted RBP18.33■□□□□ 0.53
UPK1A-203ENST00000616789 GAS2L2Q8NHY3 880 aa18.33■□□□□ 0.53
UPK1A-203ENST00000616789 MTFR1LQ9H019 292 aa18.33■□□□□ 0.53
UPK1A-203ENST00000616789 PRKRIP1Q9H875 184 aaPredicted RBP18.33■□□□□ 0.53
UPK1A-203ENST00000616789 TFCP2L1Q9NZI6 479 aa18.33■□□□□ 0.53
UPK1A-203ENST00000616789 CEMIPQ8WUJ3 1361 aa18.33■□□□□ 0.53
UPK1A-203ENST00000616789 MYH14Q7Z406 1995 aaKnown RBP18.33■□□□□ 0.52
UPK1A-203ENST00000616789 CICQ96RK0 1608 aaPredicted RBP18.33■□□□□ 0.52
UPK1A-203ENST00000616789 MAP3K5Q99683 1374 aa18.32■□□□□ 0.52
UPK1A-203ENST00000616789 GNAT3A8MTJ3 354 aa18.32■□□□□ 0.52
UPK1A-203ENST00000616789 ATP6V1AP38606 617 aa18.32■□□□□ 0.52
UPK1A-203ENST00000616789 SMIM5Q71RC9 77 aa18.32■□□□□ 0.52
UPK1A-203ENST00000616789 ATF5Q9Y2D1 282 aaPredicted RBP18.32■□□□□ 0.52
UPK1A-203ENST00000616789 MYBBP1AQ9BQG0 1328 aaKnown RBP18.32■□□□□ 0.52
UPK1A-203ENST00000616789 UTRNP46939 3433 aa18.32■□□□□ 0.52
UPK1A-203ENST00000616789 SLC16A10Q8TF71 515 aa18.31■□□□□ 0.52
UPK1A-203ENST00000616789 TJP1Q07157 1748 aa18.3■□□□□ 0.52
UPK1A-203ENST00000616789 UBR2Q8IWV8 1755 aa18.3■□□□□ 0.52
UPK1A-203ENST00000616789 KCPQ6ZWJ8 1503 aa18.3■□□□□ 0.52
UPK1A-203ENST00000616789 ZNF316A6NFI3 1004 aaPredicted RBP18.3■□□□□ 0.52
UPK1A-203ENST00000616789 SLC39A6Q13433 755 aa18.3■□□□□ 0.52
UPK1A-203ENST00000616789 GOLGB1Q14789 3259 aaKnown RBP18.29■□□□□ 0.52
UPK1A-203ENST00000616789 RBM42Q9BTD8 480 aaKnown RBP18.29■□□□□ 0.52
UPK1A-203ENST00000616789 DLG5Q8TDM6 1919 aa18.28■□□□□ 0.52
UPK1A-203ENST00000616789 PTCD1O75127 700 aaKnown RBP18.28■□□□□ 0.52
UPK1A-203ENST00000616789 HMGB2P26583 209 aaKnown RBP18.28■□□□□ 0.52
UPK1A-203ENST00000616789 RC3H1Q5TC82 1133 aaKnown RBP18.27■□□□□ 0.51
UPK1A-203ENST00000616789 CNTNAP4Q9C0A0 1308 aa18.26■□□□□ 0.51
UPK1A-203ENST00000616789 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.25■□□□□ 0.51
UPK1A-203ENST00000616789 SSFA2P28290 1259 aa18.25■□□□□ 0.51
UPK1A-203ENST00000616789 AK7Q96M32 723 aa18.25■□□□□ 0.51
UPK1A-203ENST00000616789 HTATSF1O43719 755 aaKnown RBP18.24■□□□□ 0.51
UPK1A-203ENST00000616789 FLAD1Q8NFF5 587 aa18.24■□□□□ 0.51
UPK1A-203ENST00000616789 DCTN1Q14203 1278 aa18.23■□□□□ 0.51
UPK1A-203ENST00000616789 INTS5Q6P9B9 1019 aaKnown RBP18.23■□□□□ 0.51
UPK1A-203ENST00000616789 MCM10Q7L590 875 aa18.23■□□□□ 0.51
UPK1A-203ENST00000616789 GNPATO15228 680 aa18.22■□□□□ 0.51
UPK1A-203ENST00000616789 KCNQ3O43525 872 aa18.22■□□□□ 0.51
UPK1A-203ENST00000616789 ZNF790Q6PG37 636 aa18.22■□□□□ 0.51
UPK1A-203ENST00000616789 RPS6KA4O75676 772 aa18.21■□□□□ 0.51
UPK1A-203ENST00000616789 CYP19A1P11511 503 aaPredicted RBP18.21■□□□□ 0.51
UPK1A-203ENST00000616789 CRKLP46109 303 aaKnown RBP18.21■□□□□ 0.51
UPK1A-203ENST00000616789 TEFQ10587 303 aa18.21■□□□□ 0.51
UPK1A-203ENST00000616789 DNAJC10Q8IXB1 793 aa18.21■□□□□ 0.51
UPK1A-203ENST00000616789 VSIG10Q8N0Z9 540 aa18.21■□□□□ 0.51
UPK1A-203ENST00000616789 ZNF496Q96IT1 587 aaPredicted RBP18.21■□□□□ 0.51
UPK1A-203ENST00000616789 PHF14O94880 888 aa18.2■□□□□ 0.5
UPK1A-203ENST00000616789 NFE2L2Q16236 605 aa18.2■□□□□ 0.5
UPK1A-203ENST00000616789 ARHGEF1Q92888 912 aaKnown RBP18.2■□□□□ 0.5
UPK1A-203ENST00000616789 ARXQ96QS3 562 aa18.2■□□□□ 0.5
UPK1A-203ENST00000616789 SYT17Q9BSW7 474 aa18.2■□□□□ 0.5
UPK1A-203ENST00000616789 FHDC1Q9C0D6 1143 aaPredicted RBP18.2■□□□□ 0.5
UPK1A-203ENST00000616789 CCDC184Q52MB2 194 aa18.19■□□□□ 0.5
UPK1A-203ENST00000616789 PPP1R1BQ9UD71 204 aaPredicted RBP18.19■□□□□ 0.5
UPK1A-203ENST00000616789 ADAMTS8Q9UP79 889 aa18.19■□□□□ 0.5
UPK1A-203ENST00000616789 C4AP0C0L4 1744 aa18.19■□□□□ 0.5
UPK1A-203ENST00000616789 MSL1Q68DK7 614 aa18.18■□□□□ 0.5
UPK1A-203ENST00000616789 RTCBQ9Y3I0 505 aaKnown RBP18.18■□□□□ 0.5
UPK1A-203ENST00000616789 HEG1Q9ULI3 1381 aa18.18■□□□□ 0.5
UPK1A-203ENST00000616789 BTBD11A6QL63 1104 aa18.17■□□□□ 0.5
UPK1A-203ENST00000616789 MSH5O43196 834 aa18.17■□□□□ 0.5
UPK1A-203ENST00000616789 ADRA2BP18089 450 aa18.17■□□□□ 0.5
UPK1A-203ENST00000616789 TRAPPC3LQ5T215 181 aa18.17■□□□□ 0.5
UPK1A-203ENST00000616789 RTF1Q92541 710 aaKnown RBP18.17■□□□□ 0.5
UPK1A-203ENST00000616789 PNNQ9H307 717 aaKnown RBP18.17■□□□□ 0.5
UPK1A-203ENST00000616789 TMPOP42166 694 aaKnown RBP18.16■□□□□ 0.5
UPK1A-203ENST00000616789 GYS1P13807 737 aa18.15■□□□□ 0.5
UPK1A-203ENST00000616789 TAF7Q15545 349 aaPredicted RBP18.15■□□□□ 0.5
UPK1A-203ENST00000616789 THUMPD2Q9BTF0 503 aaKnown RBP18.15■□□□□ 0.5
UPK1A-203ENST00000616789 CCDC87Q9NVE4 849 aa18.15■□□□□ 0.5
UPK1A-203ENST00000616789 SOS1Q07889 1333 aaPredicted RBP18.14■□□□□ 0.49
UPK1A-203ENST00000616789 POLD1P28340 1107 aa18.14■□□□□ 0.49
UPK1A-203ENST00000616789 TTC5Q8N0Z6 440 aa18.14■□□□□ 0.49
UPK1A-203ENST00000616789 MIS18AQ9NYP9 233 aa18.14■□□□□ 0.49
UPK1A-203ENST00000616789 ZBTB1Q9Y2K1 713 aa18.14■□□□□ 0.49
UPK1A-203ENST00000616789 KDM3BQ7LBC6 1761 aa18.14■□□□□ 0.49
UPK1A-203ENST00000616789 PRAMEF22A3QJZ6 481 aa18.13■□□□□ 0.49
UPK1A-203ENST00000616789 CCDC146Q8IYE0 955 aa18.13■□□□□ 0.49
UPK1A-203ENST00000616789 RIPK4P57078 832 aa18.12■□□□□ 0.49
UPK1A-203ENST00000616789 RUNDC1Q96C34 613 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms