RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 AK9Q5TCS8 1911 aa17.16■□□□□ 0.34
CACNA1C-231ENST00000616390 KIF24Q5T7B8 1368 aa17.15■□□□□ 0.34
CACNA1C-231ENST00000616390 CNKSR2Q8WXI2 1034 aa17.15■□□□□ 0.34
CACNA1C-231ENST00000616390 SNX21Q969T3 373 aa17.15■□□□□ 0.34
CACNA1C-231ENST00000616390 PHF8Q9UPP1 1060 aa17.15■□□□□ 0.34
CACNA1C-231ENST00000616390 SLIT1O75093 1534 aa17.14■□□□□ 0.33
CACNA1C-231ENST00000616390 TRAK2O60296 914 aa17.14■□□□□ 0.33
CACNA1C-231ENST00000616390 HMMRO75330 724 aa17.14■□□□□ 0.33
CACNA1C-231ENST00000616390 PSME1Q06323 249 aa17.14■□□□□ 0.33
CACNA1C-231ENST00000616390 CCDC30Q5VVM6 783 aa17.14■□□□□ 0.33
CACNA1C-231ENST00000616390 KDRP35968 1356 aa17.14■□□□□ 0.33
CACNA1C-231ENST00000616390 CCT4P50991 539 aaKnown RBP17.14■□□□□ 0.33
CACNA1C-231ENST00000616390 ARHGAP23Q9P227 1491 aa17.13■□□□□ 0.33
CACNA1C-231ENST00000616390 K7ELQ4 463 aaPredicted RBP17.13■□□□□ 0.33
CACNA1C-231ENST00000616390 GNAI2P04899 355 aa17.13■□□□□ 0.33
CACNA1C-231ENST00000616390 TNPO1Q92973 898 aaKnown RBP17.13■□□□□ 0.33
CACNA1C-231ENST00000616390 PHAXQ9H814 394 aaKnown RBP17.13■□□□□ 0.33
CACNA1C-231ENST00000616390 PNMA6EA0A0J9YXQ4 647 aa17.12■□□□□ 0.33
CACNA1C-231ENST00000616390 TAF7Q15545 349 aaPredicted RBP17.12■□□□□ 0.33
CACNA1C-231ENST00000616390 LRRC59Q96AG4 307 aaKnown RBP17.12■□□□□ 0.33
CACNA1C-231ENST00000616390 LGR6Q9HBX8 967 aa17.11■□□□□ 0.33
CACNA1C-231ENST00000616390 HDGFL1Q5TGJ6 251 aa17.11■□□□□ 0.33
CACNA1C-231ENST00000616390 NBPF6Q5VWK0 638 aa17.11■□□□□ 0.33
CACNA1C-231ENST00000616390 CASC1Q6TDU7 716 aa17.11■□□□□ 0.33
CACNA1C-231ENST00000616390 NBPF4Q96M43 638 aa17.11■□□□□ 0.33
CACNA1C-231ENST00000616390 ANXA1P04083 346 aa17.1■□□□□ 0.33
CACNA1C-231ENST00000616390 USP26Q9BXU7 913 aa17.1■□□□□ 0.33
CACNA1C-231ENST00000616390 LRRFIP2Q9Y608 721 aaKnown RBP17.1■□□□□ 0.33
CACNA1C-231ENST00000616390 MAP3K5Q99683 1374 aa17.1■□□□□ 0.33
CACNA1C-231ENST00000616390 ANKLE2Q86XL3 938 aa17.09■□□□□ 0.33
CACNA1C-231ENST00000616390 RILPL2Q969X0 211 aa17.09■□□□□ 0.33
CACNA1C-231ENST00000616390 TPRNQ4KMQ1 711 aa17.09■□□□□ 0.33
CACNA1C-231ENST00000616390 FBXO3Q9UK99 471 aa17.09■□□□□ 0.33
CACNA1C-231ENST00000616390 TRIM6-TRIM34B2RNG4 842 aa17.08■□□□□ 0.33
CACNA1C-231ENST00000616390 PDE1AP54750 535 aa17.08■□□□□ 0.33
CACNA1C-231ENST00000616390 KCNQ3O43525 872 aa17.08■□□□□ 0.32
CACNA1C-231ENST00000616390 SSFA2P28290 1259 aa17.08■□□□□ 0.32
CACNA1C-231ENST00000616390 IL1RAPL2Q9NP60 686 aa17.08■□□□□ 0.32
CACNA1C-231ENST00000616390 NAP1L2Q9ULW6 460 aaPredicted RBP17.08■□□□□ 0.32
CACNA1C-231ENST00000616390 GOLGA6L3A6NEY3 463 aa17.07■□□□□ 0.32
CACNA1C-231ENST00000616390 MPRIPQ6WCQ1 1025 aa17.07■□□□□ 0.32
CACNA1C-231ENST00000616390 HTATSF1O43719 755 aaKnown RBP17.07■□□□□ 0.32
CACNA1C-231ENST00000616390 DDIT3P35638 169 aa17.07■□□□□ 0.32
CACNA1C-231ENST00000616390 ORAI2Q96SN7 254 aa17.06■□□□□ 0.32
CACNA1C-231ENST00000616390 LRRCC1Q9C099 1032 aa17.06■□□□□ 0.32
CACNA1C-231ENST00000616390 GNAI3P08754 354 aa17.06■□□□□ 0.32
CACNA1C-231ENST00000616390 DDX11L8A8MPP1 907 aa17.06■□□□□ 0.32
CACNA1C-231ENST00000616390 NCOA3Q9Y6Q9 1424 aa17.05■□□□□ 0.32
CACNA1C-231ENST00000616390 UBTFL1P0CB47 393 aaPredicted RBP17.05■□□□□ 0.32
CACNA1C-231ENST00000616390 PANK2Q9BZ23 570 aa17.05■□□□□ 0.32
CACNA1C-231ENST00000616390 MAP4K4O95819 1239 aaPredicted RBP17.05■□□□□ 0.32
CACNA1C-231ENST00000616390 L1TD1Q5T7N2 865 aaKnown RBP17.05■□□□□ 0.32
CACNA1C-231ENST00000616390 IP6K1Q92551 441 aa17.05■□□□□ 0.32
CACNA1C-231ENST00000616390 GBP4Q96PP9 640 aa17.05■□□□□ 0.32
CACNA1C-231ENST00000616390 XRN1Q8IZH2 1706 aaKnown RBP17.05■□□□□ 0.32
CACNA1C-231ENST00000616390 RAB3GAP1Q15042 981 aa17.04■□□□□ 0.32
CACNA1C-231ENST00000616390 RABEP1Q15276 862 aa17.04■□□□□ 0.32
CACNA1C-231ENST00000616390 NOL8Q76FK4 1167 aaKnown RBP17.04■□□□□ 0.32
CACNA1C-231ENST00000616390 USP44Q9H0E7 712 aa17.04■□□□□ 0.32
CACNA1C-231ENST00000616390 ANKARQ7Z5J8 1434 aa17.04■□□□□ 0.32
CACNA1C-231ENST00000616390 ATP8B2P98198 1209 aa17.04■□□□□ 0.32
CACNA1C-231ENST00000616390 TEFQ10587 303 aa17.04■□□□□ 0.32
CACNA1C-231ENST00000616390 NUTM1Q86Y26 1132 aa17.04■□□□□ 0.32
CACNA1C-231ENST00000616390 CHPF2Q9P2E5 772 aa17.04■□□□□ 0.32
CACNA1C-231ENST00000616390 XRCC6P12956 609 aaKnown RBP eCLIP17.03■□□□□ 0.32
CACNA1C-231ENST00000616390 ZNF530Q6P9A1 599 aaPredicted RBP17.03■□□□□ 0.32
CACNA1C-231ENST00000616390 LTN1O94822 1766 aa17.03■□□□□ 0.32
CACNA1C-231ENST00000616390 ERC2O15083 957 aa17.03■□□□□ 0.32
CACNA1C-231ENST00000616390 MX1P20591 662 aa17.03■□□□□ 0.32
CACNA1C-231ENST00000616390 REC8O95072 547 aa17.02■□□□□ 0.32
CACNA1C-231ENST00000616390 MARF1Q9Y4F3 1742 aaKnown RBP17.02■□□□□ 0.32
CACNA1C-231ENST00000616390 FOXD4L5Q5VV16 416 aaPredicted RBP17.02■□□□□ 0.32
CACNA1C-231ENST00000616390 FOXD4L4Q8WXT5 416 aaPredicted RBP17.02■□□□□ 0.32
CACNA1C-231ENST00000616390 NWD1Q149M9 1564 aa17.02■□□□□ 0.31
CACNA1C-231ENST00000616390 BTBD11A6QL63 1104 aa17.02■□□□□ 0.31
CACNA1C-231ENST00000616390 SURF6O75683 361 aaKnown RBP17.02■□□□□ 0.31
CACNA1C-231ENST00000616390 PKP1Q13835 747 aa17.02■□□□□ 0.31
CACNA1C-231ENST00000616390 CIZ1Q9ULV3 898 aaPredicted RBP17.02■□□□□ 0.31
CACNA1C-231ENST00000616390 PI4KAP2A4QPH2 592 aa17.01■□□□□ 0.31
CACNA1C-231ENST00000616390 PI4KAP1Q8N8J0 262 aa17.01■□□□□ 0.31
CACNA1C-231ENST00000616390 RGPD2P0DJD1 1756 aa17.01■□□□□ 0.31
CACNA1C-231ENST00000616390 ZGPATQ8N5A5 531 aaKnown RBP17.01■□□□□ 0.31
CACNA1C-231ENST00000616390 NBPF7P0C2Y1 421 aaPredicted RBP17■□□□□ 0.31
CACNA1C-231ENST00000616390 KCNA4P22459 653 aa17■□□□□ 0.31
CACNA1C-231ENST00000616390 PPP1R42Q7Z4L9 355 aa17■□□□□ 0.31
CACNA1C-231ENST00000616390 UNC5CLQ8IV45 518 aa17■□□□□ 0.31
CACNA1C-231ENST00000616390 SRCIN1Q9C0H9 1055 aa17■□□□□ 0.31
CACNA1C-231ENST00000616390 ANO2Q9NQ90 1003 aa17■□□□□ 0.31
CACNA1C-231ENST00000616390 EIF4A1P60842 406 aaKnown RBP17■□□□□ 0.31
CACNA1C-231ENST00000616390 ST18O60284 1047 aa16.99■□□□□ 0.31
CACNA1C-231ENST00000616390 SRGAP3O43295 1099 aa16.99■□□□□ 0.31
CACNA1C-231ENST00000616390 GCP02774 474 aa16.99■□□□□ 0.31
CACNA1C-231ENST00000616390 NCLP19338 710 aaKnown RBP16.99■□□□□ 0.31
CACNA1C-231ENST00000616390 NEK4P51957 841 aa16.99■□□□□ 0.31
CACNA1C-231ENST00000616390 PRAMEF22A3QJZ6 481 aa16.98■□□□□ 0.31
CACNA1C-231ENST00000616390 FAM208AQ9UK61 1670 aaKnown RBP16.98■□□□□ 0.31
CACNA1C-231ENST00000616390 MCTP1Q6DN14 999 aa16.98■□□□□ 0.31
CACNA1C-231ENST00000616390 ZC3H6P61129 1189 aaKnown RBP16.97■□□□□ 0.31
CACNA1C-231ENST00000616390 C1orf141Q5JVX7 400 aa16.97■□□□□ 0.31
CACNA1C-231ENST00000616390 OSBPL3Q9H4L5 887 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms