RNA–Protein interactions for RNA: ENST00000615838.1

SDCBP2-206, Transcript of syndecan binding protein 2, humanhuman

TSL 2

Gene SDCBP2, Length 1,096 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-206ENST00000615838 CHD4Q14839 1912 aa22.76■■□□□ 1.23
SDCBP2-206ENST00000615838 HMGB2P26583 209 aaKnown RBP22.76■■□□□ 1.23
SDCBP2-206ENST00000615838 C1orf141Q5JVX7 400 aa22.76■■□□□ 1.23
SDCBP2-206ENST00000615838 MSL1Q68DK7 614 aa22.76■■□□□ 1.23
SDCBP2-206ENST00000615838 AMIGO3Q86WK7 504 aa22.76■■□□□ 1.23
SDCBP2-206ENST00000615838 KLHL34Q8N239 644 aa22.76■■□□□ 1.23
SDCBP2-206ENST00000615838 GOLGB1Q14789 3259 aaKnown RBP22.76■■□□□ 1.23
SDCBP2-206ENST00000615838 MAP3K5Q99683 1374 aa22.76■■□□□ 1.23
SDCBP2-206ENST00000615838 ITPK1Q13572 414 aa22.75■■□□□ 1.23
SDCBP2-206ENST00000615838 SMIM5Q71RC9 77 aa22.75■■□□□ 1.23
SDCBP2-206ENST00000615838 ZNF831Q5JPB2 1677 aa22.74■■□□□ 1.23
SDCBP2-206ENST00000615838 COL5A3P25940 1745 aaPredicted RBP22.74■■□□□ 1.23
SDCBP2-206ENST00000615838 HMOX1P09601 288 aa22.74■■□□□ 1.23
SDCBP2-206ENST00000615838 ATP6V1AP38606 617 aa22.74■■□□□ 1.23
SDCBP2-206ENST00000615838 MYH14Q7Z406 1995 aaKnown RBP22.73■■□□□ 1.23
SDCBP2-206ENST00000615838 DIAPH1O60610 1272 aaKnown RBP22.73■■□□□ 1.23
SDCBP2-206ENST00000615838 PHF14O94880 888 aa22.73■■□□□ 1.23
SDCBP2-206ENST00000615838 CABP4P57796 275 aa22.73■■□□□ 1.23
SDCBP2-206ENST00000615838 FLAD1Q8NFF5 587 aa22.73■■□□□ 1.23
SDCBP2-206ENST00000615838 COL3A1P02461 1466 aaPredicted RBP22.73■■□□□ 1.23
SDCBP2-206ENST00000615838 YY1P25490 414 aa22.71■■□□□ 1.23
SDCBP2-206ENST00000615838 RBM42Q9BTD8 480 aaKnown RBP22.71■■□□□ 1.23
SDCBP2-206ENST00000615838 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.7■■□□□ 1.22
SDCBP2-206ENST00000615838 SLC4A9Q96Q91 983 aa22.7■■□□□ 1.22
SDCBP2-206ENST00000615838 GNPATO15228 680 aa22.68■■□□□ 1.22
SDCBP2-206ENST00000615838 NFATC2IPQ8NCF5 419 aa22.68■■□□□ 1.22
SDCBP2-206ENST00000615838 SSFA2P28290 1259 aa22.67■■□□□ 1.22
SDCBP2-206ENST00000615838 AKAP4Q5JQC9 854 aa22.67■■□□□ 1.22
SDCBP2-206ENST00000615838 NLGN2Q8NFZ4 835 aa22.66■■□□□ 1.22
SDCBP2-206ENST00000615838 TJP1Q07157 1748 aa22.65■■□□□ 1.22
SDCBP2-206ENST00000615838 U2SURPO15042 1029 aaKnown RBP22.65■■□□□ 1.22
SDCBP2-206ENST00000615838 PTCD1O75127 700 aaKnown RBP22.65■■□□□ 1.22
SDCBP2-206ENST00000615838 ADAMTS7Q9UKP4 1686 aa22.65■■□□□ 1.22
SDCBP2-206ENST00000615838 MTHFSDQ2M296 383 aaKnown RBP22.64■■□□□ 1.21
SDCBP2-206ENST00000615838 LGR6Q9HBX8 967 aa22.64■■□□□ 1.21
SDCBP2-206ENST00000615838 C4AP0C0L4 1744 aa22.63■■□□□ 1.21
SDCBP2-206ENST00000615838 MRC1P22897 1456 aa22.62■■□□□ 1.21
SDCBP2-206ENST00000615838 GPR162Q16538 588 aa22.62■■□□□ 1.21
SDCBP2-206ENST00000615838 CICQ96RK0 1608 aaPredicted RBP22.61■■□□□ 1.21
SDCBP2-206ENST00000615838 RNMTO43148 476 aaKnown RBP22.61■■□□□ 1.21
SDCBP2-206ENST00000615838 PELP1Q8IZL8 1130 aaKnown RBP22.61■■□□□ 1.21
SDCBP2-206ENST00000615838 SLC52A2Q9HAB3 445 aa22.61■■□□□ 1.21
SDCBP2-206ENST00000615838 RTCBQ9Y3I0 505 aaKnown RBP22.6■■□□□ 1.21
SDCBP2-206ENST00000615838 CNTNAP4Q9C0A0 1308 aa22.59■■□□□ 1.21
SDCBP2-206ENST00000615838 RC3H1Q5TC82 1133 aaKnown RBP22.59■■□□□ 1.21
SDCBP2-206ENST00000615838 PPP2R1AP30153 589 aa22.58■■□□□ 1.21
SDCBP2-206ENST00000615838 CFAP53Q96M91 514 aa22.58■■□□□ 1.21
SDCBP2-206ENST00000615838 SIPA1L3O60292 1781 aaPredicted RBP22.58■■□□□ 1.2
SDCBP2-206ENST00000615838 UBR2Q8IWV8 1755 aa22.58■■□□□ 1.2
SDCBP2-206ENST00000615838 TRAPPC3LQ5T215 181 aa22.57■■□□□ 1.2
SDCBP2-206ENST00000615838 RPS6KA4O75676 772 aa22.56■■□□□ 1.2
SDCBP2-206ENST00000615838 SLC39A6Q13433 755 aa22.56■■□□□ 1.2
SDCBP2-206ENST00000615838 CD2APQ9Y5K6 639 aa22.56■■□□□ 1.2
SDCBP2-206ENST00000615838 CRKLP46109 303 aaKnown RBP22.55■■□□□ 1.2
SDCBP2-206ENST00000615838 ARHGEF1Q92888 912 aaKnown RBP22.55■■□□□ 1.2
SDCBP2-206ENST00000615838 KCPQ6ZWJ8 1503 aa22.55■■□□□ 1.2
SDCBP2-206ENST00000615838 KIF13BQ9NQT8 1826 aa22.54■■□□□ 1.2
SDCBP2-206ENST00000615838 YBX3P16989 372 aaKnown RBP eCLIP22.53■■□□□ 1.2
SDCBP2-206ENST00000615838 ADRA2BP18089 450 aa22.53■■□□□ 1.2
SDCBP2-206ENST00000615838 GAS2L2Q8NHY3 880 aa22.53■■□□□ 1.2
SDCBP2-206ENST00000615838 MMP10P09238 476 aa22.52■■□□□ 1.2
SDCBP2-206ENST00000615838 PRKAR2BP31323 418 aa22.52■■□□□ 1.2
SDCBP2-206ENST00000615838 RFC4P35249 363 aa22.52■■□□□ 1.2
SDCBP2-206ENST00000615838 DNAJC10Q8IXB1 793 aa22.52■■□□□ 1.2
SDCBP2-206ENST00000615838 RSPH6AQ9H0K4 717 aa22.52■■□□□ 1.2
SDCBP2-206ENST00000615838 N4BP2Q86UW6 1770 aaPredicted RBP22.51■■□□□ 1.19
SDCBP2-206ENST00000615838 GNAT3A8MTJ3 354 aa22.51■■□□□ 1.19
SDCBP2-206ENST00000615838 PHACTR3Q96KR7 559 aa22.51■■□□□ 1.19
SDCBP2-206ENST00000615838 NUDCQ9Y266 331 aa22.51■■□□□ 1.19
SDCBP2-206ENST00000615838 INTS5Q6P9B9 1019 aaKnown RBP22.5■■□□□ 1.19
SDCBP2-206ENST00000615838 IL17REQ8NFR9 667 aa22.5■■□□□ 1.19
SDCBP2-206ENST00000615838 U2AF1L5P0DN76 240 aaPredicted RBP22.49■■□□□ 1.19
SDCBP2-206ENST00000615838 GYS1P13807 737 aa22.49■■□□□ 1.19
SDCBP2-206ENST00000615838 U2AF1Q01081 240 aaKnown RBP eCLIP22.49■■□□□ 1.19
SDCBP2-206ENST00000615838 NLGN1Q8N2Q7 840 aa22.49■■□□□ 1.19
SDCBP2-206ENST00000615838 KIAA1551Q9HCM1 1747 aa22.48■■□□□ 1.19
SDCBP2-206ENST00000615838 CCDC87Q9NVE4 849 aa22.48■■□□□ 1.19
SDCBP2-206ENST00000615838 SRP68Q9UHB9 627 aaKnown RBP22.48■■□□□ 1.19
SDCBP2-206ENST00000615838 DLG5Q8TDM6 1919 aa22.48■■□□□ 1.19
SDCBP2-206ENST00000615838 TEFQ10587 303 aa22.47■■□□□ 1.19
SDCBP2-206ENST00000615838 ZNF784Q8NCA9 323 aaPredicted RBP22.47■■□□□ 1.19
SDCBP2-206ENST00000615838 WWC3Q9ULE0 1092 aa22.47■■□□□ 1.19
SDCBP2-206ENST00000615838 CYP19A1P11511 503 aaPredicted RBP22.46■■□□□ 1.19
SDCBP2-206ENST00000615838 GRIN3BO60391 1043 aa22.45■■□□□ 1.18
SDCBP2-206ENST00000615838 USP42Q9H9J4 1324 aaKnown RBP22.45■■□□□ 1.18
SDCBP2-206ENST00000615838 TTC5Q8N0Z6 440 aa22.44■■□□□ 1.18
SDCBP2-206ENST00000615838 CEMIPQ8WUJ3 1361 aa22.44■■□□□ 1.18
SDCBP2-206ENST00000615838 BRCA1P38398 1863 aaKnown RBP22.43■■□□□ 1.18
SDCBP2-206ENST00000615838 SOS1Q07889 1333 aaPredicted RBP22.43■■□□□ 1.18
SDCBP2-206ENST00000615838 FCHSD2O94868 740 aa22.43■■□□□ 1.18
SDCBP2-206ENST00000615838 VSIG10Q8N0Z9 540 aa22.43■■□□□ 1.18
SDCBP2-206ENST00000615838 C10orf71Q711Q0 1435 aa22.42■■□□□ 1.18
SDCBP2-206ENST00000615838 FKBP8Q14318 412 aa22.42■■□□□ 1.18
SDCBP2-206ENST00000615838 ZBTB1Q9Y2K1 713 aa22.42■■□□□ 1.18
SDCBP2-206ENST00000615838 PARP3Q9Y6F1 533 aa22.42■■□□□ 1.18
SDCBP2-206ENST00000615838 AFDNP55196 1824 aaKnown RBP22.42■■□□□ 1.18
SDCBP2-206ENST00000615838 PXDNLA1KZ92 1463 aa22.41■■□□□ 1.18
SDCBP2-206ENST00000615838 ZNF790Q6PG37 636 aa22.41■■□□□ 1.18
SDCBP2-206ENST00000615838 ZNF496Q96IT1 587 aaPredicted RBP22.41■■□□□ 1.18
SDCBP2-206ENST00000615838 COL15A1P39059 1388 aa22.39■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms