RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 NBPF1Q3BBV0 1214 aa5.34□□□□□ -1.55
CHD9-221ENST00000615216 SAMD1Q6SPF0 538 aaPredicted RBP5.34□□□□□ -1.55
CHD9-221ENST00000615216 PROSER2Q86WR7 435 aaPredicted RBP5.34□□□□□ -1.55
CHD9-221ENST00000615216 ZNF652Q9Y2D9 606 aa5.34□□□□□ -1.55
CHD9-221ENST00000615216 LRPPRCP42704 1394 aaKnown RBP5.34□□□□□ -1.55
CHD9-221ENST00000615216 CCDC196A0A1B0GTZ2 297 aa5.34□□□□□ -1.55
CHD9-221ENST00000615216 TAF4BQ92750 862 aa5.34□□□□□ -1.55
CHD9-221ENST00000615216 SCAND2PQ9GZW5 306 aaPredicted RBP5.34□□□□□ -1.55
CHD9-221ENST00000615216 NEMFO60524 1076 aa5.34□□□□□ -1.55
CHD9-221ENST00000615216 GLRX3O76003 335 aaKnown RBP5.34□□□□□ -1.55
CHD9-221ENST00000615216 TMPOP42166 694 aaKnown RBP5.34□□□□□ -1.55
CHD9-221ENST00000615216 GRIN2AQ12879 1464 aa5.34□□□□□ -1.55
CHD9-221ENST00000615216 ATP2B1P20020 1258 aa5.34□□□□□ -1.55
CHD9-221ENST00000615216 AFAP1Q8N556 730 aa5.34□□□□□ -1.55
CHD9-221ENST00000615216 SIL1Q9H173 461 aa5.34□□□□□ -1.55
CHD9-221ENST00000615216 MTMR7Q9Y216 660 aa5.34□□□□□ -1.55
CHD9-221ENST00000615216 MX1P20591 662 aa5.34□□□□□ -1.55
CHD9-221ENST00000615216 TNIP1Q15025 636 aa5.34□□□□□ -1.55
CHD9-221ENST00000615216 NUP133Q8WUM0 1156 aa5.34□□□□□ -1.55
CHD9-221ENST00000615216 TSG101Q99816 390 aa5.34□□□□□ -1.55
CHD9-221ENST00000615216 KDM5AP29375 1690 aaKnown RBP5.34□□□□□ -1.55
CHD9-221ENST00000615216 POTEB2H3BUK9 544 aa5.34□□□□□ -1.55
CHD9-221ENST00000615216 NEFHP12036 1026 aa5.34□□□□□ -1.55
CHD9-221ENST00000615216 AMOTQ4VCS5 1084 aa5.34□□□□□ -1.55
CHD9-221ENST00000615216 PYM1Q9BRP8 204 aaKnown RBP5.34□□□□□ -1.55
CHD9-221ENST00000615216 TTC21BQ7Z4L5 1316 aa5.34□□□□□ -1.55
CHD9-221ENST00000615216 RPRD2Q5VT52 1461 aaKnown RBP5.34□□□□□ -1.55
CHD9-221ENST00000615216 CWC27Q6UX04 472 aaKnown RBP5.34□□□□□ -1.55
CHD9-221ENST00000615216 TOM1L2Q6ZVM7 507 aa5.34□□□□□ -1.55
CHD9-221ENST00000615216 PDCL3Q9H2J4 239 aa5.34□□□□□ -1.55
CHD9-221ENST00000615216 CEP126Q9P2H0 1117 aa5.34□□□□□ -1.55
CHD9-221ENST00000615216 ANO10Q9NW15 660 aa5.34□□□□□ -1.56
CHD9-221ENST00000615216 BRPF3Q9ULD4 1205 aa5.34□□□□□ -1.56
CHD9-221ENST00000615216 STARD3NLO95772 234 aa5.34□□□□□ -1.56
CHD9-221ENST00000615216 CCDC91Q7Z6B0 441 aa5.34□□□□□ -1.56
CHD9-221ENST00000615216 FKBP4Q02790 459 aaKnown RBP eCLIP5.33□□□□□ -1.561e-6■■■■■ 33.9
CHD9-221ENST00000615216 SLC12A5Q9H2X9 1139 aa5.33□□□□□ -1.56
CHD9-221ENST00000615216 VPS36Q86VN1 386 aa5.33□□□□□ -1.56
CHD9-221ENST00000615216 ZSCAN30Q86W11 494 aa5.33□□□□□ -1.56
CHD9-221ENST00000615216 ANKLE2Q86XL3 938 aa5.33□□□□□ -1.56
CHD9-221ENST00000615216 AIDAQ96BJ3 306 aa5.33□□□□□ -1.56
CHD9-221ENST00000615216 CAVIN2O95810 425 aa5.33□□□□□ -1.56
CHD9-221ENST00000615216 CETN2P41208 172 aa5.33□□□□□ -1.56
CHD9-221ENST00000615216 CCDC83Q8IWF9 413 aa5.33□□□□□ -1.56
CHD9-221ENST00000615216 KDM4AO75164 1064 aa5.33□□□□□ -1.56
CHD9-221ENST00000615216 CASQ1P31415 396 aa5.33□□□□□ -1.56
CHD9-221ENST00000615216 ATP2B2Q01814 1243 aa5.33□□□□□ -1.56
CHD9-221ENST00000615216 ARHGAP29Q52LW3 1261 aa5.33□□□□□ -1.56
CHD9-221ENST00000615216 MAP4K4O95819 1239 aaPredicted RBP5.33□□□□□ -1.56
CHD9-221ENST00000615216 MYL6BP14649 208 aa5.33□□□□□ -1.56
CHD9-221ENST00000615216 SPA17Q15506 151 aa5.33□□□□□ -1.56
CHD9-221ENST00000615216 NBPF8Q3BBV2 869 aa5.33□□□□□ -1.56
CHD9-221ENST00000615216 FKBP15Q5T1M5 1219 aa5.33□□□□□ -1.56
CHD9-221ENST00000615216 LARP1Q6PKG0 1096 aaKnown RBP5.33□□□□□ -1.56
CHD9-221ENST00000615216 TMEM57Q8N5G2 664 aa5.33□□□□□ -1.56
CHD9-221ENST00000615216 ABCC5O15440 1437 aa5.33□□□□□ -1.56
CHD9-221ENST00000615216 MCM5P33992 734 aa5.33□□□□□ -1.56
CHD9-221ENST00000615216 EHMT1Q9H9B1 1298 aa5.33□□□□□ -1.56
CHD9-221ENST00000615216 UGGT2Q9NYU1 1516 aa5.33□□□□□ -1.56
CHD9-221ENST00000615216 SFPQP23246 707 aaKnown RBP eCLIP5.33□□□□□ -1.564e-6■■■□□ 18.1
CHD9-221ENST00000615216 EIF5P55010 431 aaKnown RBP5.33□□□□□ -1.56
CHD9-221ENST00000615216 STRN4Q9NRL3 753 aa5.33□□□□□ -1.56
CHD9-221ENST00000615216 HYPKQ9NX55 129 aa5.33□□□□□ -1.56
CHD9-221ENST00000615216 NUP160Q12769 1436 aa5.33□□□□□ -1.56
CHD9-221ENST00000615216 ESPNB1AK53 854 aa5.33□□□□□ -1.56
CHD9-221ENST00000615216 KIF5CO60282 957 aa5.33□□□□□ -1.56
CHD9-221ENST00000615216 FAM107BQ9H098 131 aa5.33□□□□□ -1.56
CHD9-221ENST00000615216 CGNQ9P2M7 1197 aaKnown RBP5.33□□□□□ -1.56
CHD9-221ENST00000615216 GCC2Q8IWJ2 1684 aa5.33□□□□□ -1.56
CHD9-221ENST00000615216 HSP90AB3PQ58FF7 597 aa5.32□□□□□ -1.56
CHD9-221ENST00000615216 RAB34Q9BZG1 259 aa5.32□□□□□ -1.56
CHD9-221ENST00000615216 DCAF8L1A6NGE4 600 aa5.32□□□□□ -1.56
CHD9-221ENST00000615216 ZNF76P36508 570 aa5.32□□□□□ -1.56
CHD9-221ENST00000615216 GSDMDP57764 484 aa5.32□□□□□ -1.56
CHD9-221ENST00000615216 ANKRD36BQ8N2N9 1353 aa5.32□□□□□ -1.56
CHD9-221ENST00000615216 IL16Q14005 1332 aa5.32□□□□□ -1.56
CHD9-221ENST00000615216 A0A087WZG4 1122 aa5.32□□□□□ -1.56
CHD9-221ENST00000615216 SLF2Q8IX21 1173 aa5.32□□□□□ -1.56
CHD9-221ENST00000615216 LRP2BPQ9P2M1 347 aa5.32□□□□□ -1.56
CHD9-221ENST00000615216 STX1AQ16623 288 aa5.32□□□□□ -1.56
CHD9-221ENST00000615216 ZHX3Q9H4I2 956 aa5.32□□□□□ -1.56
CHD9-221ENST00000615216 GOLGA6L9A6NEM1 432 aa5.32□□□□□ -1.56
CHD9-221ENST00000615216 KIF18AQ8NI77 898 aa5.32□□□□□ -1.56
CHD9-221ENST00000615216 RNF41Q9H4P4 317 aaPredicted RBP5.32□□□□□ -1.56
CHD9-221ENST00000615216 SEPT11Q9NVA2 429 aaKnown RBP5.32□□□□□ -1.56
CHD9-221ENST00000615216 RAI14Q9P0K7 980 aa5.32□□□□□ -1.56
CHD9-221ENST00000615216 SYCE3A1L190 88 aa5.32□□□□□ -1.56
CHD9-221ENST00000615216 DUSP27Q5VZP5 1158 aa5.32□□□□□ -1.56
CHD9-221ENST00000615216 KIF20AO95235 890 aa5.31□□□□□ -1.56
CHD9-221ENST00000615216 DDX11Q96FC9 970 aa5.31□□□□□ -1.56
CHD9-221ENST00000615216 CFAP74Q9C0B2 1584 aa5.31□□□□□ -1.56
CHD9-221ENST00000615216 SHTN1A0MZ66 631 aa5.31□□□□□ -1.56
CHD9-221ENST00000615216 MATR3P43243 847 aaKnown RBP eCLIP5.31□□□□□ -1.566e-7■■■□□ 15.5
CHD9-221ENST00000615216 TMEM266Q2M3C6 531 aa5.31□□□□□ -1.56
CHD9-221ENST00000615216 CFAP100Q494V2 611 aa5.31□□□□□ -1.56
CHD9-221ENST00000615216 FAM114A1Q8IWE2 563 aa5.31□□□□□ -1.56
CHD9-221ENST00000615216 UBXN4Q92575 508 aa5.31□□□□□ -1.56
CHD9-221ENST00000615216 KIF1BO60333 1816 aa5.31□□□□□ -1.56
CHD9-221ENST00000615216 CCDC150Q8NCX0 1101 aa5.31□□□□□ -1.56
CHD9-221ENST00000615216 CRACR2AQ9BSW2 395 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 167.7 ms