RNA–Protein interactions for RNA: ENST00000614971.4

LTN1-207, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,756 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-207ENST00000614971 ZBTB9Q96C00 473 aa4.54□□□□□ -1.68
LTN1-207ENST00000614971 IFT57Q9NWB7 429 aa4.54□□□□□ -1.68
LTN1-207ENST00000614971 CTDP1Q9Y5B0 961 aaPredicted RBP4.54□□□□□ -1.68
LTN1-207ENST00000614971 STARD3NLO95772 234 aa4.54□□□□□ -1.68
LTN1-207ENST00000614971 TFIP11Q9UBB9 837 aaKnown RBP4.54□□□□□ -1.68
LTN1-207ENST00000614971 CPA1P15085 419 aa4.54□□□□□ -1.68
LTN1-207ENST00000614971 CHMP4BP1P59074 171 aa4.54□□□□□ -1.68
LTN1-207ENST00000614971 DHX8Q14562 1220 aaKnown RBP4.54□□□□□ -1.68
LTN1-207ENST00000614971 LARP1BQ659C4 914 aaKnown RBP4.54□□□□□ -1.68
LTN1-207ENST00000614971 FAM13BQ9NYF5 915 aa4.54□□□□□ -1.68
LTN1-207ENST00000614971 TCEAL9Q9UHQ7 104 aa4.54□□□□□ -1.68
LTN1-207ENST00000614971 CYP46A1Q9Y6A2 500 aa4.54□□□□□ -1.68
LTN1-207ENST00000614971 ZMYM3Q14202 1370 aa4.54□□□□□ -1.68
LTN1-207ENST00000614971 NKTRP30414 1462 aaKnown RBP4.54□□□□□ -1.68
LTN1-207ENST00000614971 TBC1D9Q6ZT07 1266 aa4.54□□□□□ -1.68
LTN1-207ENST00000614971 PDILTQ8N807 584 aa4.54□□□□□ -1.68
LTN1-207ENST00000614971 PANK2Q9BZ23 570 aa4.54□□□□□ -1.68
LTN1-207ENST00000614971 ZHX3Q9H4I2 956 aa4.54□□□□□ -1.68
LTN1-207ENST00000614971 ATP6V1DQ9Y5K8 247 aa4.54□□□□□ -1.68
LTN1-207ENST00000614971 DISP1Q96F81 1524 aa4.54□□□□□ -1.68
LTN1-207ENST00000614971 USP5P45974 858 aa4.53□□□□□ -1.68
LTN1-207ENST00000614971 ME1P48163 572 aa4.53□□□□□ -1.68
LTN1-207ENST00000614971 BLOC1S2Q6QNY1 142 aa4.53□□□□□ -1.68
LTN1-207ENST00000614971 LDHAL6AQ6ZMR3 332 aa4.53□□□□□ -1.68
LTN1-207ENST00000614971 MAGI3Q5TCQ9 1506 aa4.53□□□□□ -1.68
LTN1-207ENST00000614971 LRRFIP1Q32MZ4 808 aaKnown RBP4.53□□□□□ -1.68
LTN1-207ENST00000614971 ISM2Q6H9L7 571 aa4.53□□□□□ -1.68
LTN1-207ENST00000614971 FAM177A1Q8N128 213 aaPredicted RBP4.53□□□□□ -1.68
LTN1-207ENST00000614971 NECAB1Q8N987 351 aa4.53□□□□□ -1.68
LTN1-207ENST00000614971 NINLQ9Y2I6 1382 aa4.53□□□□□ -1.68
LTN1-207ENST00000614971 K7ELQ4 463 aaPredicted RBP4.53□□□□□ -1.68
LTN1-207ENST00000614971 IFIT1P09914 478 aaKnown RBP4.53□□□□□ -1.68
LTN1-207ENST00000614971 SSFA2P28290 1259 aa4.53□□□□□ -1.68
LTN1-207ENST00000614971 CCDC73Q6ZRK6 1079 aa4.53□□□□□ -1.68
LTN1-207ENST00000614971 TBC1D2Q9BYX2 928 aa4.53□□□□□ -1.68
LTN1-207ENST00000614971 DBF4Q9UBU7 674 aaPredicted RBP4.53□□□□□ -1.68
LTN1-207ENST00000614971 RIMS2Q9UQ26 1411 aa4.53□□□□□ -1.68
LTN1-207ENST00000614971 KCNQ3O43525 872 aa4.53□□□□□ -1.68
LTN1-207ENST00000614971 NASPP49321 788 aaPredicted RBP4.53□□□□□ -1.68
LTN1-207ENST00000614971 WDR7Q9Y4E6 1490 aa4.53□□□□□ -1.68
LTN1-207ENST00000614971 ZPR1O75312 459 aa4.53□□□□□ -1.68
LTN1-207ENST00000614971 IFIT5Q13325 482 aaKnown RBP4.53□□□□□ -1.68
LTN1-207ENST00000614971 SASS6Q6UVJ0 657 aa4.53□□□□□ -1.68
LTN1-207ENST00000614971 ZNF622Q969S3 477 aaKnown RBP eCLIP4.53□□□□□ -1.682e-8■□□□□ 10.7
LTN1-207ENST00000614971 BTG4Q9NY30 223 aa4.53□□□□□ -1.68
LTN1-207ENST00000614971 KIAA0556O60303 1618 aa4.53□□□□□ -1.68
LTN1-207ENST00000614971 C6orf229H3BNL8 230 aa4.53□□□□□ -1.68
LTN1-207ENST00000614971 NUCB2P80303 420 aa4.53□□□□□ -1.68
LTN1-207ENST00000614971 CSPP1Q1MSJ5 1256 aa4.53□□□□□ -1.68
LTN1-207ENST00000614971 UHRF1BP1Q6BDS2 1440 aa4.53□□□□□ -1.69
LTN1-207ENST00000614971 MPHOSPH10O00566 681 aaKnown RBP4.52□□□□□ -1.69
LTN1-207ENST00000614971 TPM4P67936 248 aa4.52□□□□□ -1.69
LTN1-207ENST00000614971 SAFBQ15424 915 aaKnown RBP eCLIP4.52□□□□□ -1.69
LTN1-207ENST00000614971 LARP1Q6PKG0 1096 aaKnown RBP4.52□□□□□ -1.69
LTN1-207ENST00000614971 LMBR1LQ6UX01 489 aa4.52□□□□□ -1.69
LTN1-207ENST00000614971 HOMER1Q86YM7 354 aa4.52□□□□□ -1.69
LTN1-207ENST00000614971 KIF1BPQ96EK5 621 aa4.52□□□□□ -1.69
LTN1-207ENST00000614971 PDRG1Q9NUG6 133 aa4.52□□□□□ -1.69
LTN1-207ENST00000614971 TSPOAP1O95153 1857 aa4.52□□□□□ -1.69
LTN1-207ENST00000614971 LRPPRCP42704 1394 aaKnown RBP4.52□□□□□ -1.69
LTN1-207ENST00000614971 UHRF1BP1LA0JNW5 1464 aa4.52□□□□□ -1.69
LTN1-207ENST00000614971 RAB11FIP3O75154 756 aa4.52□□□□□ -1.69
LTN1-207ENST00000614971 SSBP05455 408 aaKnown RBP eCLIP4.52□□□□□ -1.69
LTN1-207ENST00000614971 ANKRD13DQ6ZTN6 518 aa4.52□□□□□ -1.69
LTN1-207ENST00000614971 CADPS2Q86UW7 1296 aa4.52□□□□□ -1.69
LTN1-207ENST00000614971 RANBP6O60518 1105 aaKnown RBP4.52□□□□□ -1.69
LTN1-207ENST00000614971 SF3B2Q13435 895 aaKnown RBP4.52□□□□□ -1.69
LTN1-207ENST00000614971 IFNL2Q8IZJ0 200 aa4.52□□□□□ -1.69
LTN1-207ENST00000614971 AIDAQ96BJ3 306 aa4.52□□□□□ -1.69
LTN1-207ENST00000614971 TRIM5Q9C035 493 aa4.52□□□□□ -1.69
LTN1-207ENST00000614971 SBNO2Q9Y2G9 1366 aa4.52□□□□□ -1.69
LTN1-207ENST00000614971 SYCE3A1L190 88 aa4.52□□□□□ -1.69
LTN1-207ENST00000614971 A1BGP04217 495 aa4.52□□□□□ -1.69
LTN1-207ENST00000614971 RPAP2Q8IXW5 612 aaPredicted RBP4.52□□□□□ -1.69
LTN1-207ENST00000614971 FAM89AQ96GI7 184 aa4.52□□□□□ -1.69
LTN1-207ENST00000614971 ABCC10Q5T3U5 1492 aa4.52□□□□□ -1.69
LTN1-207ENST00000614971 STK38Q15208 465 aa4.52□□□□□ -1.69
LTN1-207ENST00000614971 RABEP1Q15276 862 aa4.52□□□□□ -1.69
LTN1-207ENST00000614971 HSP90AA4PQ58FG1 418 aa4.52□□□□□ -1.69
LTN1-207ENST00000614971 YEATS2Q9ULM3 1422 aa4.52□□□□□ -1.69
LTN1-207ENST00000614971 PZPP20742 1482 aa4.52□□□□□ -1.69
LTN1-207ENST00000614971 WDR62O43379 1518 aa4.52□□□□□ -1.69
LTN1-207ENST00000614971 SDSP20132 328 aa4.52□□□□□ -1.69
LTN1-207ENST00000614971 ATP6V1AP38606 617 aa4.52□□□□□ -1.69
LTN1-207ENST00000614971 IGHMBP2P38935 993 aaKnown RBP4.52□□□□□ -1.69
LTN1-207ENST00000614971 VAT1LQ9HCJ6 419 aa4.52□□□□□ -1.69
LTN1-207ENST00000614971 CTTNBP2Q8WZ74 1663 aa4.51□□□□□ -1.69
LTN1-207ENST00000614971 UGGT1Q9NYU2 1555 aa4.51□□□□□ -1.69
LTN1-207ENST00000614971 RXRAP19793 462 aa4.51□□□□□ -1.69
LTN1-207ENST00000614971 PSMA5P28066 241 aa4.51□□□□□ -1.69
LTN1-207ENST00000614971 ZCRB1Q8TBF4 217 aaKnown RBP4.51□□□□□ -1.69
LTN1-207ENST00000614971 ZNF594Q96JF6 807 aaPredicted RBP4.51□□□□□ -1.69
LTN1-207ENST00000614971 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.51□□□□□ -1.69
LTN1-207ENST00000614971 ADAMTS12P58397 1594 aa4.51□□□□□ -1.69
LTN1-207ENST00000614971 MAP3K1Q13233 1512 aa4.51□□□□□ -1.69
LTN1-207ENST00000614971 VAMP4O75379 141 aa4.51□□□□□ -1.69
LTN1-207ENST00000614971 SMC2O95347 1197 aa4.51□□□□□ -1.69
LTN1-207ENST00000614971 CKAP2LQ8IYA6 745 aa4.51□□□□□ -1.69
LTN1-207ENST00000614971 RBM27Q9P2N5 1060 aaKnown RBP4.51□□□□□ -1.69
LTN1-207ENST00000614971 TIMM10P62072 90 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms