RNA–Protein interactions for RNA: ENST00000614090.1

PTPN20CP-201, Transcript of protein tyrosine phosphatase, non-receptor type 20C, pseudogene, humanhuman

BASIC

Gene PTPN20CP, Length 920 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20CP-201ENST00000614090 LOC102724428A0A0B4J2F2 783 aa17.9■□□□□ 0.46
PTPN20CP-201ENST00000614090 SIK1P57059 783 aa17.9■□□□□ 0.46
PTPN20CP-201ENST00000614090 USHBP1Q8N6Y0 703 aa17.9■□□□□ 0.46
PTPN20CP-201ENST00000614090 CCDC87Q9NVE4 849 aa17.9■□□□□ 0.46
PTPN20CP-201ENST00000614090 CYP27B1O15528 508 aa17.89■□□□□ 0.45
PTPN20CP-201ENST00000614090 COG3Q96JB2 828 aa17.89■□□□□ 0.45
PTPN20CP-201ENST00000614090 RNF181Q9P0P0 153 aa17.89■□□□□ 0.45
PTPN20CP-201ENST00000614090 NLGN1Q8N2Q7 840 aa17.88■□□□□ 0.45
PTPN20CP-201ENST00000614090 PIGBQ92521 554 aa17.88■□□□□ 0.45
PTPN20CP-201ENST00000614090 L3MBTL2Q969R5 705 aa17.87■□□□□ 0.45
PTPN20CP-201ENST00000614090 DCAF5Q96JK2 942 aa17.87■□□□□ 0.45
PTPN20CP-201ENST00000614090 ZNF831Q5JPB2 1677 aa17.87■□□□□ 0.45
PTPN20CP-201ENST00000614090 KCNA3P22001 575 aa17.86■□□□□ 0.45
PTPN20CP-201ENST00000614090 TMF1P82094 1093 aa17.86■□□□□ 0.45
PTPN20CP-201ENST00000614090 ITPK1Q13572 414 aa17.86■□□□□ 0.45
PTPN20CP-201ENST00000614090 PCDH10Q9P2E7 1040 aa17.86■□□□□ 0.45
PTPN20CP-201ENST00000614090 ZC3H4Q9UPT8 1303 aaKnown RBP17.86■□□□□ 0.45
PTPN20CP-201ENST00000614090 FBLN1P23142 703 aa17.85■□□□□ 0.45
PTPN20CP-201ENST00000614090 COL5A3P25940 1745 aaPredicted RBP17.85■□□□□ 0.45
PTPN20CP-201ENST00000614090 PIM2Q9P1W9 311 aa17.85■□□□□ 0.45
PTPN20CP-201ENST00000614090 TIAM2Q8IVF5 1701 aa17.84■□□□□ 0.45
PTPN20CP-201ENST00000614090 ATP6V1AP38606 617 aa17.83■□□□□ 0.44
PTPN20CP-201ENST00000614090 CCDC88AQ3V6T2 1871 aa17.82■□□□□ 0.44
PTPN20CP-201ENST00000614090 NKX1-1Q15270 411 aaPredicted RBP17.82■□□□□ 0.44
PTPN20CP-201ENST00000614090 DALRD3Q5D0E6 543 aaKnown RBP17.82■□□□□ 0.44
PTPN20CP-201ENST00000614090 TRAPPC3LQ5T215 181 aa17.82■□□□□ 0.44
PTPN20CP-201ENST00000614090 RTCBQ9Y3I0 505 aaKnown RBP17.82■□□□□ 0.44
PTPN20CP-201ENST00000614090 PARP3Q9Y6F1 533 aa17.82■□□□□ 0.44
PTPN20CP-201ENST00000614090 KDM6AO15550 1401 aaPredicted RBP17.81■□□□□ 0.44
PTPN20CP-201ENST00000614090 INSRP06213 1382 aa17.81■□□□□ 0.44
PTPN20CP-201ENST00000614090 ADRA2BP18089 450 aa17.81■□□□□ 0.44
PTPN20CP-201ENST00000614090 RRS1Q15050 365 aaKnown RBP17.81■□□□□ 0.44
PTPN20CP-201ENST00000614090 PUS7Q96PZ0 661 aaKnown RBP17.81■□□□□ 0.44
PTPN20CP-201ENST00000614090 KDRP35968 1356 aa17.8■□□□□ 0.44
PTPN20CP-201ENST00000614090 GYS1P13807 737 aa17.8■□□□□ 0.44
PTPN20CP-201ENST00000614090 VEGFAP15692 232 aaPredicted RBP17.8■□□□□ 0.44
PTPN20CP-201ENST00000614090 TMOD3Q9NYL9 352 aa17.8■□□□□ 0.44
PTPN20CP-201ENST00000614090 MYH14Q7Z406 1995 aaKnown RBP17.8■□□□□ 0.44
PTPN20CP-201ENST00000614090 PRDM10Q9NQV6 1147 aa17.79■□□□□ 0.44
PTPN20CP-201ENST00000614090 ASAP1Q9ULH1 1129 aa17.79■□□□□ 0.44
PTPN20CP-201ENST00000614090 NCAPD2Q15021 1401 aa17.79■□□□□ 0.44
PTPN20CP-201ENST00000614090 FLT4P35916 1363 aa17.78■□□□□ 0.44
PTPN20CP-201ENST00000614090 KIF24Q5T7B8 1368 aa17.78■□□□□ 0.44
PTPN20CP-201ENST00000614090 GLTPD2A6NH11 291 aa17.77■□□□□ 0.44
PTPN20CP-201ENST00000614090 ARHGEF1Q92888 912 aaKnown RBP17.77■□□□□ 0.44
PTPN20CP-201ENST00000614090 DLEC1Q9Y238 1755 aa17.76■□□□□ 0.43
PTPN20CP-201ENST00000614090 FOXN1O15353 648 aa17.76■□□□□ 0.43
PTPN20CP-201ENST00000614090 RC3H1Q5TC82 1133 aaKnown RBP17.76■□□□□ 0.43
PTPN20CP-201ENST00000614090 KIF20BQ96Q89 1820 aa17.76■□□□□ 0.43
PTPN20CP-201ENST00000614090 CNTNAP4Q9C0A0 1308 aa17.75■□□□□ 0.43
PTPN20CP-201ENST00000614090 RFC4P35249 363 aa17.75■□□□□ 0.43
PTPN20CP-201ENST00000614090 HSP90AB2PQ58FF8 381 aa17.75■□□□□ 0.43
PTPN20CP-201ENST00000614090 CREBZFQ9NS37 354 aa17.75■□□□□ 0.43
PTPN20CP-201ENST00000614090 SPG7Q9UQ90 795 aa17.75■□□□□ 0.43
PTPN20CP-201ENST00000614090 RASSF7Q02833 373 aa17.74■□□□□ 0.43
PTPN20CP-201ENST00000614090 FAM161AQ3B820 660 aa17.74■□□□□ 0.43
PTPN20CP-201ENST00000614090 ATG3Q9NT62 314 aa17.74■□□□□ 0.43
PTPN20CP-201ENST00000614090 DICER1Q9UPY3 1922 aaKnown RBP17.73■□□□□ 0.43
PTPN20CP-201ENST00000614090 RPS6KA4O75676 772 aa17.73■□□□□ 0.43
PTPN20CP-201ENST00000614090 LMNB1P20700 586 aa17.73■□□□□ 0.43
PTPN20CP-201ENST00000614090 VIRMAQ69YN4 1812 aaKnown RBP17.72■□□□□ 0.43
PTPN20CP-201ENST00000614090 CHRNA5P30532 468 aa17.72■□□□□ 0.43
PTPN20CP-201ENST00000614090 MKRN1Q9UHC7 482 aaKnown RBP17.72■□□□□ 0.43
PTPN20CP-201ENST00000614090 CTCFP49711 727 aaPredicted RBP17.71■□□□□ 0.43
PTPN20CP-201ENST00000614090 SLC4A9Q96Q91 983 aa17.71■□□□□ 0.43
PTPN20CP-201ENST00000614090 CARD11Q9BXL7 1154 aa17.71■□□□□ 0.43
PTPN20CP-201ENST00000614090 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.71■□□□□ 0.43
PTPN20CP-201ENST00000614090 ANKRD26Q9UPS8 1709 aa17.71■□□□□ 0.43
PTPN20CP-201ENST00000614090 AFDNP55196 1824 aaKnown RBP17.7■□□□□ 0.42
PTPN20CP-201ENST00000614090 CNTNAP1P78357 1384 aa17.7■□□□□ 0.42
PTPN20CP-201ENST00000614090 DDR1Q08345 913 aa17.7■□□□□ 0.42
PTPN20CP-201ENST00000614090 TONSLQ96HA7 1378 aa17.69■□□□□ 0.42
PTPN20CP-201ENST00000614090 FYB1O15117 783 aa17.69■□□□□ 0.42
PTPN20CP-201ENST00000614090 AIDAQ96BJ3 306 aa17.69■□□□□ 0.42
PTPN20CP-201ENST00000614090 GGNBP2Q9H3C7 697 aa17.69■□□□□ 0.42
PTPN20CP-201ENST00000614090 ADAMTS7Q9UKP4 1686 aa17.68■□□□□ 0.42
PTPN20CP-201ENST00000614090 POTECB2RU33 542 aa17.68■□□□□ 0.42
PTPN20CP-201ENST00000614090 PHKG2P15735 406 aa17.68■□□□□ 0.42
PTPN20CP-201ENST00000614090 IFNL2Q8IZJ0 200 aa17.68■□□□□ 0.42
PTPN20CP-201ENST00000614090 USP42Q9H9J4 1324 aaKnown RBP17.68■□□□□ 0.42
PTPN20CP-201ENST00000614090 NRXN2Q9P2S2 1712 aa17.67■□□□□ 0.42
PTPN20CP-201ENST00000614090 FKBP8Q14318 412 aa17.67■□□□□ 0.42
PTPN20CP-201ENST00000614090 RBM42Q9BTD8 480 aaKnown RBP17.67■□□□□ 0.42
PTPN20CP-201ENST00000614090 ABHD8Q96I13 439 aa17.66■□□□□ 0.42
PTPN20CP-201ENST00000614090 POLRMTO00411 1230 aaKnown RBP17.65■□□□□ 0.42
PTPN20CP-201ENST00000614090 CHADLQ6NUI6 762 aa17.65■□□□□ 0.42
PTPN20CP-201ENST00000614090 SRP68Q9UHB9 627 aaKnown RBP17.65■□□□□ 0.42
PTPN20CP-201ENST00000614090 TJP1Q07157 1748 aa17.64■□□□□ 0.41
PTPN20CP-201ENST00000614090 DPY19L2Q6NUT2 758 aa17.64■□□□□ 0.41
PTPN20CP-201ENST00000614090 SIN3AQ96ST3 1273 aa17.64■□□□□ 0.41
PTPN20CP-201ENST00000614090 FER1L6Q2WGJ9 1857 aa17.64■□□□□ 0.41
PTPN20CP-201ENST00000614090 PDE4DIPQ5VU43 2346 aa17.63■□□□□ 0.41
PTPN20CP-201ENST00000614090 LBX1P52954 281 aa17.63■□□□□ 0.41
PTPN20CP-201ENST00000614090 MLLT1Q03111 559 aaPredicted RBP17.63■□□□□ 0.41
PTPN20CP-201ENST00000614090 ERVV-2B6SEH9 535 aa17.62■□□□□ 0.41
PTPN20CP-201ENST00000614090 NFKBIEO00221 500 aa17.62■□□□□ 0.41
PTPN20CP-201ENST00000614090 WBP1LQ9NX94 342 aa17.62■□□□□ 0.41
PTPN20CP-201ENST00000614090 EMILIN1Q9Y6C2 1016 aa17.62■□□□□ 0.41
PTPN20CP-201ENST00000614090 TM4SF1P30408 202 aa17.61■□□□□ 0.41
PTPN20CP-201ENST00000614090 CRKLP46109 303 aaKnown RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms