RNA–Protein interactions for RNA: ENST00000614051.1

CCL3-206, Transcript of C-C motif chemokine ligand 3, humanhuman

TSL 1 (best)

Gene CCL3, Length 1,494 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-206ENST00000614051 HSP90AB1P08238 724 aaKnown RBP20.28■□□□□ 0.84
CCL3-206ENST00000614051 DCAF5Q96JK2 942 aa20.28■□□□□ 0.84
CCL3-206ENST00000614051 MIS18AQ9NYP9 233 aa20.28■□□□□ 0.84
CCL3-206ENST00000614051 KAT6BQ8WYB5 2073 aa20.27■□□□□ 0.84
CCL3-206ENST00000614051 IL16Q14005 1332 aa20.27■□□□□ 0.84
CCL3-206ENST00000614051 TSR2Q969E8 191 aaKnown RBP20.27■□□□□ 0.84
CCL3-206ENST00000614051 E9PSI1 815 aa20.26■□□□□ 0.83
CCL3-206ENST00000614051 CALD1Q05682 793 aaKnown RBP20.26■□□□□ 0.83
CCL3-206ENST00000614051 ITGB4P16144 1822 aa20.25■□□□□ 0.83
CCL3-206ENST00000614051 DOT1LQ8TEK3 1739 aa20.25■□□□□ 0.83
CCL3-206ENST00000614051 ZNF853P0CG23 659 aa20.25■□□□□ 0.83
CCL3-206ENST00000614051 TRMT2AQ8IZ69 625 aaKnown RBP20.25■□□□□ 0.83
CCL3-206ENST00000614051 IFT57Q9NWB7 429 aa20.25■□□□□ 0.83
CCL3-206ENST00000614051 GNAI1P63096 354 aa20.24■□□□□ 0.83
CCL3-206ENST00000614051 TEFQ10587 303 aa20.24■□□□□ 0.83
CCL3-206ENST00000614051 FAM182BQ5T319 152 aa20.24■□□□□ 0.83
CCL3-206ENST00000614051 DUSP27Q5VZP5 1158 aa20.24■□□□□ 0.83
CCL3-206ENST00000614051 CFAP44Q96MT7 982 aa20.24■□□□□ 0.83
CCL3-206ENST00000614051 FANCIQ9NVI1 1328 aa20.24■□□□□ 0.83
CCL3-206ENST00000614051 TAF7Q15545 349 aaPredicted RBP20.24■□□□□ 0.83
CCL3-206ENST00000614051 NFATC2IPQ8NCF5 419 aa20.24■□□□□ 0.83
CCL3-206ENST00000614051 SLC52A2Q9HAB3 445 aa20.24■□□□□ 0.83
CCL3-206ENST00000614051 MBIPQ9NS73 344 aa20.24■□□□□ 0.83
CCL3-206ENST00000614051 MRC1P22897 1456 aa20.23■□□□□ 0.83
CCL3-206ENST00000614051 CHL1O00533 1208 aa20.23■□□□□ 0.83
CCL3-206ENST00000614051 CABP4P57796 275 aa20.23■□□□□ 0.83
CCL3-206ENST00000614051 SLC4A2P04920 1241 aa20.22■□□□□ 0.83
CCL3-206ENST00000614051 MYH16Q9H6N6 1097 aa20.22■□□□□ 0.83
CCL3-206ENST00000614051 KDM3BQ7LBC6 1761 aa20.22■□□□□ 0.83
CCL3-206ENST00000614051 ERVV-2B6SEH9 535 aa20.21■□□□□ 0.83
CCL3-206ENST00000614051 TSPYL4Q9UJ04 414 aa20.21■□□□□ 0.83
CCL3-206ENST00000614051 ACSBG1Q96GR2 724 aa20.2■□□□□ 0.82
CCL3-206ENST00000614051 BTBD11A6QL63 1104 aa20.19■□□□□ 0.82
CCL3-206ENST00000614051 KCNQ3O43525 872 aa20.19■□□□□ 0.82
CCL3-206ENST00000614051 CENPBP07199 599 aaPredicted RBP20.19■□□□□ 0.82
CCL3-206ENST00000614051 PRIM1P49642 420 aaKnown RBP20.18■□□□□ 0.82
CCL3-206ENST00000614051 EXOSC9Q06265 439 aaKnown RBP20.18■□□□□ 0.82
CCL3-206ENST00000614051 SBF2Q86WG5 1849 aa20.18■□□□□ 0.82
CCL3-206ENST00000614051 SLC39A6Q13433 755 aa20.18■□□□□ 0.82
CCL3-206ENST00000614051 KRT27Q7Z3Y8 459 aa20.18■□□□□ 0.82
CCL3-206ENST00000614051 SYTL4Q96C24 671 aaPredicted RBP20.18■□□□□ 0.82
CCL3-206ENST00000614051 KRT24Q2M2I5 525 aa20.17■□□□□ 0.82
CCL3-206ENST00000614051 RNF39Q9H2S5 420 aa20.17■□□□□ 0.82
CCL3-206ENST00000614051 TMOD3Q9NYL9 352 aa20.17■□□□□ 0.82
CCL3-206ENST00000614051 PIGBQ92521 554 aa20.16■□□□□ 0.82
CCL3-206ENST00000614051 PAPPAQ13219 1627 aa20.15■□□□□ 0.82
CCL3-206ENST00000614051 KCNQ2O43526 872 aa20.15■□□□□ 0.82
CCL3-206ENST00000614051 C8orf58Q8NAV2 365 aa20.15■□□□□ 0.82
CCL3-206ENST00000614051 BABAM1Q9NWV8 329 aa20.15■□□□□ 0.82
CCL3-206ENST00000614051 TSPYL6Q8N831 410 aa20.14■□□□□ 0.81
CCL3-206ENST00000614051 BCL9O00512 1426 aa20.14■□□□□ 0.81
CCL3-206ENST00000614051 ELL2O00472 640 aaPredicted RBP20.13■□□□□ 0.81
CCL3-206ENST00000614051 PTF1AQ7RTS3 328 aa20.13■□□□□ 0.81
CCL3-206ENST00000614051 NHSQ6T4R5 1651 aa20.13■□□□□ 0.81
CCL3-206ENST00000614051 EIF4A1P60842 406 aaKnown RBP20.12■□□□□ 0.81
CCL3-206ENST00000614051 SF3B2Q13435 895 aaKnown RBP20.12■□□□□ 0.81
CCL3-206ENST00000614051 ZNF790Q6PG37 636 aa20.12■□□□□ 0.81
CCL3-206ENST00000614051 UBR2Q8IWV8 1755 aa20.12■□□□□ 0.81
CCL3-206ENST00000614051 ASAP1Q9ULH1 1129 aa20.11■□□□□ 0.81
CCL3-206ENST00000614051 EP400Q96L91 3159 aa20.11■□□□□ 0.81
CCL3-206ENST00000614051 BTAF1O14981 1849 aa20.1■□□□□ 0.81
CCL3-206ENST00000614051 ATG3Q9NT62 314 aa20.1■□□□□ 0.81
CCL3-206ENST00000614051 TTC5Q8N0Z6 440 aa20.09■□□□□ 0.81
CCL3-206ENST00000614051 C5P01031 1676 aa20.09■□□□□ 0.81
CCL3-206ENST00000614051 KCPQ6ZWJ8 1503 aa20.08■□□□□ 0.81
CCL3-206ENST00000614051 TWISTNBQ3B726 338 aaPredicted RBP20.08■□□□□ 0.81
CCL3-206ENST00000614051 FAM196AQ6ZSG2 479 aa20.08■□□□□ 0.81
CCL3-206ENST00000614051 ZNF496Q96IT1 587 aaPredicted RBP20.08■□□□□ 0.81
CCL3-206ENST00000614051 VAMP4O75379 141 aa20.07■□□□□ 0.8
CCL3-206ENST00000614051 PRAMEF22A3QJZ6 481 aa20.06■□□□□ 0.8
CCL3-206ENST00000614051 PTCD1O75127 700 aaKnown RBP20.06■□□□□ 0.8
CCL3-206ENST00000614051 RCAN3Q9UKA8 241 aa20.06■□□□□ 0.8
CCL3-206ENST00000614051 HEG1Q9ULI3 1381 aa20.05■□□□□ 0.8
CCL3-206ENST00000614051 TCERG1O14776 1098 aaKnown RBP20.05■□□□□ 0.8
CCL3-206ENST00000614051 TRIM37O94972 964 aa20.05■□□□□ 0.8
CCL3-206ENST00000614051 FMNL2Q96PY5 1086 aa20.05■□□□□ 0.8
CCL3-206ENST00000614051 GIGYF1O75420 1035 aaPredicted RBP20.04■□□□□ 0.8
CCL3-206ENST00000614051 NECTIN2Q92692 538 aa20.04■□□□□ 0.8
CCL3-206ENST00000614051 RBM42Q9BTD8 480 aaKnown RBP20.03■□□□□ 0.8
CCL3-206ENST00000614051 BCL2L13Q9BXK5 485 aa20.03■□□□□ 0.8
CCL3-206ENST00000614051 BCAR3O75815 825 aa20.02■□□□□ 0.8
CCL3-206ENST00000614051 CT47B1P0C2W7 299 aaPredicted RBP20.02■□□□□ 0.8
CCL3-206ENST00000614051 RARSP54136 660 aaKnown RBP20.02■□□□□ 0.8
CCL3-206ENST00000614051 BCL11BQ9C0K0 894 aaPredicted RBP20.02■□□□□ 0.8
CCL3-206ENST00000614051 EIF2S2P20042 333 aaKnown RBP20.01■□□□□ 0.79
CCL3-206ENST00000614051 SLC4A9Q96Q91 983 aa20.01■□□□□ 0.79
CCL3-206ENST00000614051 PALLDQ8WX93 1383 aa20.01■□□□□ 0.79
CCL3-206ENST00000614051 LAMB4A4D0S4 1761 aa20.01■□□□□ 0.79
CCL3-206ENST00000614051 SNRPA1P09661 255 aaKnown RBP20■□□□□ 0.79
CCL3-206ENST00000614051 SSH1Q8WYL5 1049 aa20■□□□□ 0.79
CCL3-206ENST00000614051 SUPT16HQ9Y5B9 1047 aaKnown RBP20■□□□□ 0.79
CCL3-206ENST00000614051 TJP1Q07157 1748 aa20■□□□□ 0.79
CCL3-206ENST00000614051 USP16Q9Y5T5 823 aa19.99■□□□□ 0.79
CCL3-206ENST00000614051 BAG6P46379 1132 aa19.99■□□□□ 0.79
CCL3-206ENST00000614051 HDGFL1Q5TGJ6 251 aa19.99■□□□□ 0.79
CCL3-206ENST00000614051 DEFB132Q7Z7B7 95 aa19.99■□□□□ 0.79
CCL3-206ENST00000614051 SMARCC1Q92922 1105 aaPredicted RBP19.99■□□□□ 0.79
CCL3-206ENST00000614051 LY75O60449 1722 aa19.98■□□□□ 0.79
CCL3-206ENST00000614051 HOXB7P09629 217 aa19.98■□□□□ 0.79
CCL3-206ENST00000614051 SMC4Q9NTJ3 1288 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms