RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 SCN11AQ9UI33 1791 aa17.78■□□□□ 0.44
TMEM254-213ENST00000613758 ERVV-2B6SEH9 535 aa17.77■□□□□ 0.44
TMEM254-213ENST00000613758 C8orf58Q8NAV2 365 aa17.77■□□□□ 0.44
TMEM254-213ENST00000613758 A0A0G2JS52 829 aa17.77■□□□□ 0.43
TMEM254-213ENST00000613758 ELL2O00472 640 aaPredicted RBP17.77■□□□□ 0.43
TMEM254-213ENST00000613758 MYT1Q01538 1121 aa17.77■□□□□ 0.43
TMEM254-213ENST00000613758 TSPYL6Q8N831 410 aa17.77■□□□□ 0.43
TMEM254-213ENST00000613758 VIRMAQ69YN4 1812 aaKnown RBP17.77■□□□□ 0.43
TMEM254-213ENST00000613758 ZNF772Q68DY9 489 aaPredicted RBP17.76■□□□□ 0.43
TMEM254-213ENST00000613758 GLI3P10071 1580 aa17.76■□□□□ 0.43
TMEM254-213ENST00000613758 VAMP4O75379 141 aa17.75■□□□□ 0.43
TMEM254-213ENST00000613758 RARSP54136 660 aaKnown RBP17.75■□□□□ 0.43
TMEM254-213ENST00000613758 KRT24Q2M2I5 525 aa17.75■□□□□ 0.43
TMEM254-213ENST00000613758 TWISTNBQ3B726 338 aaPredicted RBP17.75■□□□□ 0.43
TMEM254-213ENST00000613758 MARCH10Q8NA82 808 aaPredicted RBP17.75■□□□□ 0.43
TMEM254-213ENST00000613758 KCNQ3O43525 872 aa17.74■□□□□ 0.43
TMEM254-213ENST00000613758 ONECUT3O60422 494 aaPredicted RBP17.74■□□□□ 0.43
TMEM254-213ENST00000613758 MRC1P22897 1456 aa17.74■□□□□ 0.43
TMEM254-213ENST00000613758 ERICH6BQ5W0A0 696 aa17.74■□□□□ 0.43
TMEM254-213ENST00000613758 SIPA1L3O60292 1781 aaPredicted RBP17.73■□□□□ 0.43
TMEM254-213ENST00000613758 BCAR3O75815 825 aa17.73■□□□□ 0.43
TMEM254-213ENST00000613758 EIF4A1P60842 406 aaKnown RBP17.73■□□□□ 0.43
TMEM254-213ENST00000613758 RRP1P56182 461 aaKnown RBP17.72■□□□□ 0.43
TMEM254-213ENST00000613758 ZNF428Q96B54 188 aa17.72■□□□□ 0.43
TMEM254-213ENST00000613758 SLC39A6Q13433 755 aa17.72■□□□□ 0.43
TMEM254-213ENST00000613758 ZNF790Q6PG37 636 aa17.72■□□□□ 0.43
TMEM254-213ENST00000613758 THSD7AQ9UPZ6 1657 aa17.71■□□□□ 0.43
TMEM254-213ENST00000613758 SEPT12Q8IYM1 358 aa17.71■□□□□ 0.43
TMEM254-213ENST00000613758 TMOD3Q9NYL9 352 aa17.71■□□□□ 0.43
TMEM254-213ENST00000613758 SSH1Q8WYL5 1049 aa17.7■□□□□ 0.42
TMEM254-213ENST00000613758 KDM3BQ7LBC6 1761 aa17.7■□□□□ 0.42
TMEM254-213ENST00000613758 BCL2L13Q9BXK5 485 aa17.7■□□□□ 0.42
TMEM254-213ENST00000613758 RBM6P78332 1123 aaKnown RBP17.69■□□□□ 0.42
TMEM254-213ENST00000613758 ALDH1L2Q3SY69 923 aa17.69■□□□□ 0.42
TMEM254-213ENST00000613758 TTC5Q8N0Z6 440 aa17.69■□□□□ 0.42
TMEM254-213ENST00000613758 PIGBQ92521 554 aa17.69■□□□□ 0.42
TMEM254-213ENST00000613758 SMC4Q9NTJ3 1288 aa17.69■□□□□ 0.42
TMEM254-213ENST00000613758 SOS1Q07889 1333 aaPredicted RBP17.68■□□□□ 0.42
TMEM254-213ENST00000613758 TOGARAM1Q9Y4F4 1720 aa17.68■□□□□ 0.42
TMEM254-213ENST00000613758 PLIN1O60240 522 aa17.68■□□□□ 0.42
TMEM254-213ENST00000613758 PRIM1P49642 420 aaKnown RBP17.68■□□□□ 0.42
TMEM254-213ENST00000613758 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.67■□□□□ 0.42
TMEM254-213ENST00000613758 SYTL4Q96C24 671 aaPredicted RBP17.67■□□□□ 0.42
TMEM254-213ENST00000613758 TCERG1O14776 1098 aaKnown RBP17.67■□□□□ 0.42
TMEM254-213ENST00000613758 ACSBG1Q96GR2 724 aa17.66■□□□□ 0.42
TMEM254-213ENST00000613758 ZNF496Q96IT1 587 aaPredicted RBP17.66■□□□□ 0.42
TMEM254-213ENST00000613758 HEG1Q9ULI3 1381 aa17.66■□□□□ 0.42
TMEM254-213ENST00000613758 HOXB7P09629 217 aa17.66■□□□□ 0.42
TMEM254-213ENST00000613758 RGS17Q9UGC6 210 aaPredicted RBP17.66■□□□□ 0.42
TMEM254-213ENST00000613758 GIGYF1O75420 1035 aaPredicted RBP17.65■□□□□ 0.42
TMEM254-213ENST00000613758 MRPL50Q8N5N7 158 aaKnown RBP17.65■□□□□ 0.42
TMEM254-213ENST00000613758 FRAT1Q92837 279 aaPredicted RBP17.65■□□□□ 0.42
TMEM254-213ENST00000613758 FMNL2Q96PY5 1086 aa17.65■□□□□ 0.42
TMEM254-213ENST00000613758 BCL9O00512 1426 aa17.65■□□□□ 0.42
TMEM254-213ENST00000613758 RXRBP28702 533 aa17.64■□□□□ 0.42
TMEM254-213ENST00000613758 PPP4R2Q9NY27 417 aa17.64■□□□□ 0.42
TMEM254-213ENST00000613758 BRPF1P55201 1214 aaPredicted RBP17.64■□□□□ 0.41
TMEM254-213ENST00000613758 CCDC30Q5VVM6 783 aa17.64■□□□□ 0.41
TMEM254-213ENST00000613758 ASAP1Q9ULH1 1129 aa17.64■□□□□ 0.41
TMEM254-213ENST00000613758 ITGB4P16144 1822 aa17.63■□□□□ 0.41
TMEM254-213ENST00000613758 CANXP27824 592 aaKnown RBP17.63■□□□□ 0.41
TMEM254-213ENST00000613758 NECTIN2Q92692 538 aa17.63■□□□□ 0.41
TMEM254-213ENST00000613758 ATG3Q9NT62 314 aa17.63■□□□□ 0.41
TMEM254-213ENST00000613758 KAT6BQ8WYB5 2073 aa17.63■□□□□ 0.41
TMEM254-213ENST00000613758 EIF2S2P20042 333 aaKnown RBP17.63■□□□□ 0.41
TMEM254-213ENST00000613758 FAM182BQ5T319 152 aa17.63■□□□□ 0.41
TMEM254-213ENST00000613758 HDGFL1Q5TGJ6 251 aa17.63■□□□□ 0.41
TMEM254-213ENST00000613758 CHMP4AQ9BY43 222 aa17.63■□□□□ 0.41
TMEM254-213ENST00000613758 DOT1LQ8TEK3 1739 aa17.63■□□□□ 0.41
TMEM254-213ENST00000613758 PRAMEF22A3QJZ6 481 aa17.62■□□□□ 0.41
TMEM254-213ENST00000613758 SNRPA1P09661 255 aaKnown RBP17.62■□□□□ 0.41
TMEM254-213ENST00000613758 NOB1Q9ULX3 412 aaKnown RBP17.62■□□□□ 0.41
TMEM254-213ENST00000613758 KCNQ2O43526 872 aa17.62■□□□□ 0.41
TMEM254-213ENST00000613758 PTCD1O75127 700 aaKnown RBP17.62■□□□□ 0.41
TMEM254-213ENST00000613758 SLC4A2P04920 1241 aa17.61■□□□□ 0.41
TMEM254-213ENST00000613758 POTEAQ6S8J7 498 aa17.61■□□□□ 0.41
TMEM254-213ENST00000613758 STK31Q9BXU1 1019 aa17.61■□□□□ 0.41
TMEM254-213ENST00000613758 KIF16BQ96L93 1317 aa17.61■□□□□ 0.41
TMEM254-213ENST00000613758 ZKSCAN2Q63HK3 967 aa17.6■□□□□ 0.41
TMEM254-213ENST00000613758 KRT27Q7Z3Y8 459 aa17.6■□□□□ 0.41
TMEM254-213ENST00000613758 ILDR1Q86SU0 546 aaPredicted RBP17.6■□□□□ 0.41
TMEM254-213ENST00000613758 IPO8O15397 1037 aaKnown RBP17.6■□□□□ 0.41
TMEM254-213ENST00000613758 C20orf194Q5TEA3 1177 aa17.6■□□□□ 0.41
TMEM254-213ENST00000613758 PAPPAQ13219 1627 aa17.6■□□□□ 0.41
TMEM254-213ENST00000613758 KCPQ6ZWJ8 1503 aa17.59■□□□□ 0.41
TMEM254-213ENST00000613758 RBM42Q9BTD8 480 aaKnown RBP17.58■□□□□ 0.4
TMEM254-213ENST00000613758 USP16Q9Y5T5 823 aa17.58■□□□□ 0.4
TMEM254-213ENST00000613758 ATF7IPQ6VMQ6 1270 aa17.57■□□□□ 0.4
TMEM254-213ENST00000613758 UBR2Q8IWV8 1755 aa17.57■□□□□ 0.4
TMEM254-213ENST00000613758 PDE3AQ14432 1141 aa17.57■□□□□ 0.4
TMEM254-213ENST00000613758 ARHGAP45Q92619 1136 aa17.57■□□□□ 0.4
TMEM254-213ENST00000613758 CHPF2Q9P2E5 772 aa17.57■□□□□ 0.4
TMEM254-213ENST00000613758 TNNQ9UQP3 1299 aa17.57■□□□□ 0.4
TMEM254-213ENST00000613758 EXOC6Q8TAG9 804 aa17.56■□□□□ 0.4
TMEM254-213ENST00000613758 TRIM27P14373 513 aa17.56■□□□□ 0.4
TMEM254-213ENST00000613758 FAM196AQ6ZSG2 479 aa17.56■□□□□ 0.4
TMEM254-213ENST00000613758 G2E3Q7L622 706 aa17.56■□□□□ 0.4
TMEM254-213ENST00000613758 PTF1AQ7RTS3 328 aa17.56■□□□□ 0.4
TMEM254-213ENST00000613758 VSIG10Q8N0Z9 540 aa17.56■□□□□ 0.4
TMEM254-213ENST00000613758 CLUAP1Q96AJ1 413 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms