RNA–Protein interactions for RNA: ENST00000613462.1

SRGAP2C-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 484 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-204ENST00000613462 RIPK4P57078 832 aa17.08■□□□□ 0.32
SRGAP2C-204ENST00000613462 SLC52A2Q9HAB3 445 aa17.08■□□□□ 0.32
SRGAP2C-204ENST00000613462 PLSCR1O15162 318 aa17.07■□□□□ 0.32
SRGAP2C-204ENST00000613462 APBA3O96018 575 aa17.07■□□□□ 0.32
SRGAP2C-204ENST00000613462 NCBP3Q53F19 620 aaKnown RBP17.07■□□□□ 0.32
SRGAP2C-204ENST00000613462 KDM3BQ7LBC6 1761 aa17.07■□□□□ 0.32
SRGAP2C-204ENST00000613462 NUP188Q5SRE5 1749 aa17.07■□□□□ 0.32
SRGAP2C-204ENST00000613462 CICQ96RK0 1608 aaPredicted RBP17.07■□□□□ 0.32
SRGAP2C-204ENST00000613462 TAF1LQ8IZX4 1826 aa17.06■□□□□ 0.32
SRGAP2C-204ENST00000613462 APAF1O14727 1248 aa17.06■□□□□ 0.32
SRGAP2C-204ENST00000613462 EN1Q05925 392 aaPredicted RBP17.06■□□□□ 0.32
SRGAP2C-204ENST00000613462 TEFQ10587 303 aa17.06■□□□□ 0.32
SRGAP2C-204ENST00000613462 SMARCC1Q92922 1105 aaPredicted RBP17.06■□□□□ 0.32
SRGAP2C-204ENST00000613462 LGR6Q9HBX8 967 aa17.06■□□□□ 0.32
SRGAP2C-204ENST00000613462 NGEFQ8N5V2 710 aa17.05■□□□□ 0.32
SRGAP2C-204ENST00000613462 IL17REQ8NFR9 667 aa17.05■□□□□ 0.32
SRGAP2C-204ENST00000613462 PIGBQ92521 554 aa17.05■□□□□ 0.32
SRGAP2C-204ENST00000613462 C5P01031 1676 aa17.04■□□□□ 0.32
SRGAP2C-204ENST00000613462 HMGB2P26583 209 aaKnown RBP17.04■□□□□ 0.32
SRGAP2C-204ENST00000613462 PTF1AQ7RTS3 328 aa17.04■□□□□ 0.32
SRGAP2C-204ENST00000613462 NFATC2IPQ8NCF5 419 aa17.04■□□□□ 0.32
SRGAP2C-204ENST00000613462 R3HDM1Q15032 1099 aaKnown RBP17.03■□□□□ 0.32
SRGAP2C-204ENST00000613462 MCM10Q7L590 875 aa17.03■□□□□ 0.32
SRGAP2C-204ENST00000613462 RRP7AQ9Y3A4 280 aaKnown RBP17.03■□□□□ 0.32
SRGAP2C-204ENST00000613462 PALLDQ8WX93 1383 aa17.02■□□□□ 0.32
SRGAP2C-204ENST00000613462 CALD1Q05682 793 aaKnown RBP17.02■□□□□ 0.32
SRGAP2C-204ENST00000613462 NEUROD2Q15784 382 aa17.02■□□□□ 0.32
SRGAP2C-204ENST00000613462 CCDC27Q2M243 656 aa17.02■□□□□ 0.32
SRGAP2C-204ENST00000613462 COL5A3P25940 1745 aaPredicted RBP17.01■□□□□ 0.31
SRGAP2C-204ENST00000613462 DCTN1Q14203 1278 aa17■□□□□ 0.31
SRGAP2C-204ENST00000613462 SLC27A3Q5K4L6 730 aa17■□□□□ 0.31
SRGAP2C-204ENST00000613462 CAMKK2Q96RR4 588 aa17■□□□□ 0.31
SRGAP2C-204ENST00000613462 TRIM35Q9UPQ4 493 aa17■□□□□ 0.31
SRGAP2C-204ENST00000613462 KCPQ6ZWJ8 1503 aa17■□□□□ 0.31
SRGAP2C-204ENST00000613462 TJP1Q07157 1748 aa16.99■□□□□ 0.31
SRGAP2C-204ENST00000613462 TAF7Q15545 349 aaPredicted RBP16.99■□□□□ 0.31
SRGAP2C-204ENST00000613462 ATG3Q9NT62 314 aa16.99■□□□□ 0.31
SRGAP2C-204ENST00000613462 BABAM1Q9NWV8 329 aa16.99■□□□□ 0.31
SRGAP2C-204ENST00000613462 ASAP1Q9ULH1 1129 aa16.99■□□□□ 0.31
SRGAP2C-204ENST00000613462 LAMB4A4D0S4 1761 aa16.99■□□□□ 0.31
SRGAP2C-204ENST00000613462 QSER1Q2KHR3 1735 aa16.99■□□□□ 0.31
SRGAP2C-204ENST00000613462 BTBD11A6QL63 1104 aa16.98■□□□□ 0.31
SRGAP2C-204ENST00000613462 EZH2Q15910 746 aaKnown RBP16.98■□□□□ 0.31
SRGAP2C-204ENST00000613462 TXNRD1Q16881 649 aa16.98■□□□□ 0.31
SRGAP2C-204ENST00000613462 TTC5Q8N0Z6 440 aa16.98■□□□□ 0.31
SRGAP2C-204ENST00000613462 C4BP0C0L5 1744 aa16.96■□□□□ 0.31
SRGAP2C-204ENST00000613462 ZNF790Q6PG37 636 aa16.96■□□□□ 0.31
SRGAP2C-204ENST00000613462 THUMPD2Q9BTF0 503 aaKnown RBP16.96■□□□□ 0.31
SRGAP2C-204ENST00000613462 CCNL1Q9UK58 526 aaPredicted RBP16.96■□□□□ 0.31
SRGAP2C-204ENST00000613462 LOC102724428A0A0B4J2F2 783 aa16.95■□□□□ 0.3
SRGAP2C-204ENST00000613462 SIK1P57059 783 aa16.95■□□□□ 0.3
SRGAP2C-204ENST00000613462 WWC1Q8IX03 1113 aa16.95■□□□□ 0.3
SRGAP2C-204ENST00000613462 YY1P25490 414 aa16.94■□□□□ 0.3
SRGAP2C-204ENST00000613462 VSIG10Q8N0Z9 540 aa16.94■□□□□ 0.3
SRGAP2C-204ENST00000613462 IL16Q14005 1332 aa16.94■□□□□ 0.3
SRGAP2C-204ENST00000613462 TUBGCP6Q96RT7 1819 aa16.93■□□□□ 0.3
SRGAP2C-204ENST00000613462 UBR3Q6ZT12 1888 aa16.93■□□□□ 0.3
SRGAP2C-204ENST00000613462 SLC39A6Q13433 755 aa16.93■□□□□ 0.3
SRGAP2C-204ENST00000613462 PROM2Q8N271 834 aa16.93■□□□□ 0.3
SRGAP2C-204ENST00000613462 CFAP44Q96MT7 982 aa16.93■□□□□ 0.3
SRGAP2C-204ENST00000613462 FMNL2Q96PY5 1086 aa16.93■□□□□ 0.3
SRGAP2C-204ENST00000613462 IFT57Q9NWB7 429 aa16.93■□□□□ 0.3
SRGAP2C-204ENST00000613462 PTCD1O75127 700 aaKnown RBP16.92■□□□□ 0.3
SRGAP2C-204ENST00000613462 GNAI1P63096 354 aa16.92■□□□□ 0.3
SRGAP2C-204ENST00000613462 WDR63Q8IWG1 891 aa16.92■□□□□ 0.3
SRGAP2C-204ENST00000613462 RBM42Q9BTD8 480 aaKnown RBP16.92■□□□□ 0.3
SRGAP2C-204ENST00000613462 TSPYL4Q9UJ04 414 aa16.92■□□□□ 0.3
SRGAP2C-204ENST00000613462 HEG1Q9ULI3 1381 aa16.91■□□□□ 0.3
SRGAP2C-204ENST00000613462 ATP6V1AP38606 617 aa16.91■□□□□ 0.3
SRGAP2C-204ENST00000613462 MYH14Q7Z406 1995 aaKnown RBP16.91■□□□□ 0.3
SRGAP2C-204ENST00000613462 CHL1O00533 1208 aa16.9■□□□□ 0.3
SRGAP2C-204ENST00000613462 NBPF14Q5TI25 921 aa16.9■□□□□ 0.3
SRGAP2C-204ENST00000613462 ZNF496Q96IT1 587 aaPredicted RBP16.9■□□□□ 0.3
SRGAP2C-204ENST00000613462 TEX13AQ9BXU3 409 aaPredicted RBP16.9■□□□□ 0.3
SRGAP2C-204ENST00000613462 LRRC4BQ9NT99 713 aa16.9■□□□□ 0.3
SRGAP2C-204ENST00000613462 ZNF853P0CG23 659 aa16.89■□□□□ 0.29
SRGAP2C-204ENST00000613462 ZNF521Q96K83 1311 aa16.89■□□□□ 0.29
SRGAP2C-204ENST00000613462 MIS18AQ9NYP9 233 aa16.88■□□□□ 0.29
SRGAP2C-204ENST00000613462 SALL2Q9Y467 1007 aaPredicted RBP16.88■□□□□ 0.29
SRGAP2C-204ENST00000613462 LAS1LQ9Y4W2 734 aaKnown RBP16.88■□□□□ 0.29
SRGAP2C-204ENST00000613462 CACNA1FO60840 1977 aa16.88■□□□□ 0.29
SRGAP2C-204ENST00000613462 SENP3-EIF4A1A0A087X0R7 540 aa16.87■□□□□ 0.29
SRGAP2C-204ENST00000613462 SNRPA1P09661 255 aaKnown RBP16.87■□□□□ 0.29
SRGAP2C-204ENST00000613462 EIF4A1P60842 406 aaKnown RBP16.87■□□□□ 0.29
SRGAP2C-204ENST00000613462 ITPK1Q13572 414 aa16.87■□□□□ 0.29
SRGAP2C-204ENST00000613462 SLC4A9Q96Q91 983 aa16.87■□□□□ 0.29
SRGAP2C-204ENST00000613462 STK32BQ9NY57 414 aa16.87■□□□□ 0.29
SRGAP2C-204ENST00000613462 CNTNAP4Q9C0A0 1308 aa16.87■□□□□ 0.29
SRGAP2C-204ENST00000613462 KCNQ3O43525 872 aa16.86■□□□□ 0.29
SRGAP2C-204ENST00000613462 STARD3NLO95772 234 aa16.86■□□□□ 0.29
SRGAP2C-204ENST00000613462 MBIPQ9NS73 344 aa16.86■□□□□ 0.29
SRGAP2C-204ENST00000613462 C4AP0C0L4 1744 aa16.85■□□□□ 0.29
SRGAP2C-204ENST00000613462 KCNQ4P56696 695 aa16.85■□□□□ 0.29
SRGAP2C-204ENST00000613462 HNRNPUQ00839 825 aaKnown RBP eCLIP16.85■□□□□ 0.29
SRGAP2C-204ENST00000613462 RC3H1Q5TC82 1133 aaKnown RBP16.85■□□□□ 0.29
SRGAP2C-204ENST00000613462 LINC00116Q8NCU8 138 aa16.85■□□□□ 0.29
SRGAP2C-204ENST00000613462 CASZ1Q86V15 1759 aa16.84■□□□□ 0.29
SRGAP2C-204ENST00000613462 GIGYF1O75420 1035 aaPredicted RBP16.84■□□□□ 0.29
SRGAP2C-204ENST00000613462 HOXB7P09629 217 aa16.84■□□□□ 0.29
SRGAP2C-204ENST00000613462 GOLGA2Q08379 1002 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms