RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 DZIP1LQ8IYY4 767 aaKnown RBP5.76□□□□□ -1.49
VPS13D-213ENST00000613099 DONSONQ9NYP3 566 aa5.76□□□□□ -1.49
VPS13D-213ENST00000613099 CNTLNQ9NXG0 1405 aa5.76□□□□□ -1.49
VPS13D-213ENST00000613099 ATP8B1O43520 1251 aa5.76□□□□□ -1.49
VPS13D-213ENST00000613099 GBP7Q8N8V2 638 aaPredicted RBP5.76□□□□□ -1.49
VPS13D-213ENST00000613099 PLEKHG2Q9H7P9 1386 aa5.76□□□□□ -1.49
VPS13D-213ENST00000613099 CXorf56Q9H5V9 222 aa5.76□□□□□ -1.49
VPS13D-213ENST00000613099 SAMD1Q6SPF0 538 aaPredicted RBP5.76□□□□□ -1.49
VPS13D-213ENST00000613099 FOXD4L6Q3SYB3 417 aaPredicted RBP5.76□□□□□ -1.49
VPS13D-213ENST00000613099 HSP90AB2PQ58FF8 381 aa5.76□□□□□ -1.49
VPS13D-213ENST00000613099 RBM26Q5T8P6 1007 aaKnown RBP5.76□□□□□ -1.49
VPS13D-213ENST00000613099 FOXD4L3Q6VB84 417 aaPredicted RBP5.76□□□□□ -1.49
VPS13D-213ENST00000613099 NCOA2Q15596 1464 aa5.76□□□□□ -1.49
VPS13D-213ENST00000613099 GIGYF2Q6Y7W6 1299 aaKnown RBP5.76□□□□□ -1.49
VPS13D-213ENST00000613099 CTAGE5O15320 804 aa5.76□□□□□ -1.49
VPS13D-213ENST00000613099 PSMD7P51665 324 aa5.76□□□□□ -1.49
VPS13D-213ENST00000613099 CCDC30Q5VVM6 783 aa5.76□□□□□ -1.49
VPS13D-213ENST00000613099 FYCO1Q9BQS8 1478 aa5.76□□□□□ -1.49
VPS13D-213ENST00000613099 TRAF1Q13077 416 aa5.76□□□□□ -1.49
VPS13D-213ENST00000613099 CCDC150Q8NCX0 1101 aa5.76□□□□□ -1.49
VPS13D-213ENST00000613099 TOPBP1Q92547 1522 aa5.76□□□□□ -1.49
VPS13D-213ENST00000613099 PIP4K2BP78356 416 aa5.75□□□□□ -1.49
VPS13D-213ENST00000613099 PNISRQ8TF01 805 aaKnown RBP5.75□□□□□ -1.49
VPS13D-213ENST00000613099 CHMP7Q8WUX9 453 aaPredicted RBP5.75□□□□□ -1.49
VPS13D-213ENST00000613099 RUFY2Q8WXA3 655 aa5.75□□□□□ -1.49
VPS13D-213ENST00000613099 DTNBP1Q96EV8 351 aa5.75□□□□□ -1.49
VPS13D-213ENST00000613099 URI1O94763 535 aaPredicted RBP5.75□□□□□ -1.49
VPS13D-213ENST00000613099 RMDN2Q96LZ7 410 aa5.75□□□□□ -1.49
VPS13D-213ENST00000613099 ZNF396Q96N95 335 aaPredicted RBP5.75□□□□□ -1.49
VPS13D-213ENST00000613099 SKILP12757 684 aa5.75□□□□□ -1.49
VPS13D-213ENST00000613099 ZBTB17Q13105 803 aa5.75□□□□□ -1.49
VPS13D-213ENST00000613099 CCDC40Q4G0X9 1142 aa5.75□□□□□ -1.49
VPS13D-213ENST00000613099 TMEM51Q9NW97 253 aa5.75□□□□□ -1.49
VPS13D-213ENST00000613099 RIPK4P57078 832 aa5.75□□□□□ -1.49
VPS13D-213ENST00000613099 MCM6Q14566 821 aa5.75□□□□□ -1.49
VPS13D-213ENST00000613099 DAAM2Q86T65 1068 aa5.75□□□□□ -1.49
VPS13D-213ENST00000613099 ARMC2Q8NEN0 867 aa5.75□□□□□ -1.49
VPS13D-213ENST00000613099 NBPF9Q3BBW0 867 aa5.75□□□□□ -1.49
VPS13D-213ENST00000613099 FAM76AQ8TAV0 307 aa5.75□□□□□ -1.49
VPS13D-213ENST00000613099 ZNF830Q96NB3 372 aaPredicted RBP5.75□□□□□ -1.49
VPS13D-213ENST00000613099 VCXQ9H320 206 aa5.75□□□□□ -1.49
VPS13D-213ENST00000613099 APBB1O00213 710 aa5.75□□□□□ -1.49
VPS13D-213ENST00000613099 NUP62CLQ9H1M0 184 aa5.75□□□□□ -1.49
VPS13D-213ENST00000613099 IRAK4Q9NWZ3 460 aa5.75□□□□□ -1.49
VPS13D-213ENST00000613099 PIP4K2AP48426 406 aaPredicted RBP5.75□□□□□ -1.49
VPS13D-213ENST00000613099 SMC5Q8IY18 1101 aa5.75□□□□□ -1.49
VPS13D-213ENST00000613099 BCL2L12Q9HB09 334 aa5.75□□□□□ -1.49
VPS13D-213ENST00000613099 SPAG9O60271 1321 aaKnown RBP5.75□□□□□ -1.49
VPS13D-213ENST00000613099 CCDC175P0C221 793 aa5.75□□□□□ -1.49
VPS13D-213ENST00000613099 ATP2B1P20020 1258 aa5.75□□□□□ -1.49
VPS13D-213ENST00000613099 LRRC23Q53EV4 343 aaPredicted RBP5.75□□□□□ -1.49
VPS13D-213ENST00000613099 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.75□□□□□ -1.49
VPS13D-213ENST00000613099 RAD50Q92878 1312 aa5.75□□□□□ -1.49
VPS13D-213ENST00000613099 GUCY2CP25092 1073 aa5.75□□□□□ -1.49
VPS13D-213ENST00000613099 CCDC144AA2RUR9 1427 aa5.75□□□□□ -1.49
VPS13D-213ENST00000613099 MAP7Q14244 749 aa5.75□□□□□ -1.49
VPS13D-213ENST00000613099 TRIM4Q9C037 500 aa5.75□□□□□ -1.49
VPS13D-213ENST00000613099 FGD5Q6ZNL6 1462 aa5.75□□□□□ -1.49
VPS13D-213ENST00000613099 ZSCAN20P17040 1043 aaPredicted RBP5.75□□□□□ -1.49
VPS13D-213ENST00000613099 PSMA5P28066 241 aa5.75□□□□□ -1.49
VPS13D-213ENST00000613099 FILIP1LQ4L180 1135 aa5.75□□□□□ -1.49
VPS13D-213ENST00000613099 CEP128Q6ZU80 1094 aa5.75□□□□□ -1.49
VPS13D-213ENST00000613099 POGZQ7Z3K3 1410 aa5.74□□□□□ -1.49
VPS13D-213ENST00000613099 CEP89Q96ST8 783 aa5.74□□□□□ -1.49
VPS13D-213ENST00000613099 ELP1O95163 1332 aa5.74□□□□□ -1.49
VPS13D-213ENST00000613099 RRP15Q9Y3B9 282 aaKnown RBP5.74□□□□□ -1.49
VPS13D-213ENST00000613099 PRIM1P49642 420 aaKnown RBP5.74□□□□□ -1.49
VPS13D-213ENST00000613099 NOL8Q76FK4 1167 aaKnown RBP5.74□□□□□ -1.49
VPS13D-213ENST00000613099 MORC1Q86VD1 984 aa5.74□□□□□ -1.49
VPS13D-213ENST00000613099 VPS18Q9P253 973 aa5.74□□□□□ -1.49
VPS13D-213ENST00000613099 NEK4P51957 841 aa5.74□□□□□ -1.49
VPS13D-213ENST00000613099 ARHGAP35Q9NRY4 1499 aa5.74□□□□□ -1.49
VPS13D-213ENST00000613099 RIOK3O14730 519 aaKnown RBP5.74□□□□□ -1.49
VPS13D-213ENST00000613099 GOLGA1Q92805 767 aa5.74□□□□□ -1.49
VPS13D-213ENST00000613099 MYCNP04198 464 aaPredicted RBP5.74□□□□□ -1.49
VPS13D-213ENST00000613099 CCDC141Q6ZP82 1450 aa5.74□□□□□ -1.49
VPS13D-213ENST00000613099 RAB3GAP1Q15042 981 aa5.74□□□□□ -1.49
VPS13D-213ENST00000613099 EXOC4Q96A65 974 aa5.74□□□□□ -1.49
VPS13D-213ENST00000613099 PIK3R5Q8WYR1 880 aa5.74□□□□□ -1.49
VPS13D-213ENST00000613099 PLEKHH1Q9ULM0 1364 aa5.74□□□□□ -1.49
VPS13D-213ENST00000613099 DNAJC8O75937 253 aaPredicted RBP5.74□□□□□ -1.49
VPS13D-213ENST00000613099 GTF3C6Q969F1 213 aa5.74□□□□□ -1.49
VPS13D-213ENST00000613099 SLMAPQ14BN4 828 aa5.73□□□□□ -1.49
VPS13D-213ENST00000613099 PDZRN3Q9UPQ7 1066 aa5.73□□□□□ -1.49
VPS13D-213ENST00000613099 KRT85P78386 507 aa5.73□□□□□ -1.49
VPS13D-213ENST00000613099 ODF2LQ9ULJ1 636 aa5.73□□□□□ -1.49
VPS13D-213ENST00000613099 RRBP1Q9P2E9 1410 aaKnown RBP5.73□□□□□ -1.49
VPS13D-213ENST00000613099 BSDC1Q9NW68 430 aaPredicted RBP5.73□□□□□ -1.49
VPS13D-213ENST00000613099 LUC7LQ9NQ29 371 aaKnown RBP5.73□□□□□ -1.49
VPS13D-213ENST00000613099 UBE2HP62256 183 aa5.73□□□□□ -1.49
VPS13D-213ENST00000613099 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.73□□□□□ -1.492e-6■■■□□ 15.9
VPS13D-213ENST00000613099 BUB1BO60566 1050 aaPredicted RBP5.73□□□□□ -1.49
VPS13D-213ENST00000613099 GRIN2BQ13224 1484 aa5.73□□□□□ -1.49
VPS13D-213ENST00000613099 CCDC181Q5TID7 509 aa5.73□□□□□ -1.49
VPS13D-213ENST00000613099 UPF3BQ9BZI7 483 aaKnown RBP5.73□□□□□ -1.49
VPS13D-213ENST00000613099 CFAP45Q9UL16 551 aa5.73□□□□□ -1.49
VPS13D-213ENST00000613099 MYOM3Q5VTT5 1437 aa5.73□□□□□ -1.49
VPS13D-213ENST00000613099 CREB3O43889 395 aa5.73□□□□□ -1.49
VPS13D-213ENST00000613099 IMMTQ16891 758 aaKnown RBP5.73□□□□□ -1.49
VPS13D-213ENST00000613099 TRIM6Q9C030 488 aaPredicted RBP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms