RNA–Protein interactions for RNA: ENST00000613013.1

UBXN8-206, Transcript of UBX domain protein 8, humanhuman

TSL 2

Gene UBXN8, Length 528 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN8-206ENST00000613013 MKRN1Q9UHC7 482 aaKnown RBP12.57□□□□□ -0.4
UBXN8-206ENST00000613013 COL5A2P05997 1499 aaPredicted RBP12.57□□□□□ -0.4
UBXN8-206ENST00000613013 ANKARQ7Z5J8 1434 aa12.56□□□□□ -0.4
UBXN8-206ENST00000613013 COL23A1Q86Y22 540 aaPredicted RBP12.56□□□□□ -0.4
UBXN8-206ENST00000613013 PRAM1Q96QH2 718 aa12.56□□□□□ -0.4
UBXN8-206ENST00000613013 CDCA7Q9BWT1 371 aaPredicted RBP12.56□□□□□ -0.4
UBXN8-206ENST00000613013 BRD4O60885 1362 aaPredicted RBP12.56□□□□□ -0.4
UBXN8-206ENST00000613013 DPY19L2Q6NUT2 758 aa12.55□□□□□ -0.4
UBXN8-206ENST00000613013 SIRT1Q96EB6 747 aa12.55□□□□□ -0.4
UBXN8-206ENST00000613013 POGKQ9P215 609 aa12.55□□□□□ -0.4
UBXN8-206ENST00000613013 USP6P35125 1406 aa12.54□□□□□ -0.4
UBXN8-206ENST00000613013 YTHDC2Q9H6S0 1430 aaKnown RBP12.54□□□□□ -0.4
UBXN8-206ENST00000613013 AKAP12Q02952 1782 aa12.54□□□□□ -0.4
UBXN8-206ENST00000613013 SLC27A3Q5K4L6 730 aa12.54□□□□□ -0.4
UBXN8-206ENST00000613013 MFRPQ9BY79 579 aa12.54□□□□□ -0.4
UBXN8-206ENST00000613013 KDM2BQ8NHM5 1336 aa12.54□□□□□ -0.4
UBXN8-206ENST00000613013 ABTB2Q8N961 1025 aa12.53□□□□□ -0.4
UBXN8-206ENST00000613013 OTUD5Q96G74 571 aa12.53□□□□□ -0.4
UBXN8-206ENST00000613013 PRR36Q9H6K5 1346 aa12.53□□□□□ -0.4
UBXN8-206ENST00000613013 CPDO75976 1380 aa12.53□□□□□ -0.4
UBXN8-206ENST00000613013 TRPM1Q7Z4N2 1603 aa12.52□□□□□ -0.4
UBXN8-206ENST00000613013 LMO7Q8WWI1 1683 aa12.52□□□□□ -0.4
UBXN8-206ENST00000613013 GCP02774 474 aa12.52□□□□□ -0.41
UBXN8-206ENST00000613013 NLRP6P59044 892 aa12.52□□□□□ -0.41
UBXN8-206ENST00000613013 C9orf131Q5VYM1 1079 aa12.52□□□□□ -0.41
UBXN8-206ENST00000613013 FBXO22Q8NEZ5 403 aa12.52□□□□□ -0.41
UBXN8-206ENST00000613013 MS4A4AQ96JQ5 239 aa12.52□□□□□ -0.41
UBXN8-206ENST00000613013 KAT6BQ8WYB5 2073 aa12.51□□□□□ -0.41
UBXN8-206ENST00000613013 BCS1LQ9Y276 419 aa12.51□□□□□ -0.41
UBXN8-206ENST00000613013 KIF7Q2M1P5 1343 aa12.51□□□□□ -0.41
UBXN8-206ENST00000613013 KCPQ6ZWJ8 1503 aa12.51□□□□□ -0.41
UBXN8-206ENST00000613013 TNRC18O15417 2968 aaPredicted RBP12.5□□□□□ -0.41
UBXN8-206ENST00000613013 SUPT16HQ9Y5B9 1047 aaKnown RBP12.5□□□□□ -0.41
UBXN8-206ENST00000613013 USP47Q96K76 1375 aa12.5□□□□□ -0.41
UBXN8-206ENST00000613013 QSER1Q2KHR3 1735 aa12.5□□□□□ -0.41
UBXN8-206ENST00000613013 KNDC1Q76NI1 1749 aa12.5□□□□□ -0.41
UBXN8-206ENST00000613013 MINK1Q8N4C8 1332 aaPredicted RBP12.49□□□□□ -0.41
UBXN8-206ENST00000613013 CSB-PGBD3P0DP91 1061 aa12.49□□□□□ -0.41
UBXN8-206ENST00000613013 NKX1-1Q15270 411 aaPredicted RBP12.49□□□□□ -0.41
UBXN8-206ENST00000613013 RGL3Q3MIN7 710 aa12.49□□□□□ -0.41
UBXN8-206ENST00000613013 MAMSTRQ6ZN01 415 aa12.49□□□□□ -0.41
UBXN8-206ENST00000613013 L3MBTL3Q96JM7 780 aaPredicted RBP12.49□□□□□ -0.41
UBXN8-206ENST00000613013 PRKRIP1Q9H875 184 aaPredicted RBP12.48□□□□□ -0.41
UBXN8-206ENST00000613013 TUBGCP6Q96RT7 1819 aa12.48□□□□□ -0.41
UBXN8-206ENST00000613013 PPLO60437 1756 aa12.48□□□□□ -0.41
UBXN8-206ENST00000613013 NHSQ6T4R5 1651 aa12.48□□□□□ -0.41
UBXN8-206ENST00000613013 SCUBE2Q9NQ36 999 aa12.47□□□□□ -0.41
UBXN8-206ENST00000613013 PDE4DIPQ5VU43 2346 aa12.46□□□□□ -0.41
UBXN8-206ENST00000613013 BTAF1O14981 1849 aa12.46□□□□□ -0.41
UBXN8-206ENST00000613013 ROCK2O75116 1388 aaKnown RBP12.46□□□□□ -0.41
UBXN8-206ENST00000613013 WDR17Q8IZU2 1322 aa12.46□□□□□ -0.41
UBXN8-206ENST00000613013 NLRP13Q86W25 1043 aa12.46□□□□□ -0.41
UBXN8-206ENST00000613013 HSPA8P11142 646 aaKnown RBP12.45□□□□□ -0.42
UBXN8-206ENST00000613013 CARD10Q9BWT7 1032 aa12.45□□□□□ -0.42
UBXN8-206ENST00000613013 AXIN2Q9Y2T1 843 aa12.45□□□□□ -0.42
UBXN8-206ENST00000613013 EIF3AQ14152 1382 aaKnown RBP12.44□□□□□ -0.42
UBXN8-206ENST00000613013 PLEKHG2Q9H7P9 1386 aa12.44□□□□□ -0.42
UBXN8-206ENST00000613013 WASLO00401 505 aaPredicted RBP12.44□□□□□ -0.42
UBXN8-206ENST00000613013 RNF181Q9P0P0 153 aa12.44□□□□□ -0.42
UBXN8-206ENST00000613013 C10orf71Q711Q0 1435 aa12.44□□□□□ -0.42
UBXN8-206ENST00000613013 CICQ96RK0 1608 aaPredicted RBP12.44□□□□□ -0.42
UBXN8-206ENST00000613013 SYTL4Q96C24 671 aaPredicted RBP12.43□□□□□ -0.42
UBXN8-206ENST00000613013 WBP1LQ9NX94 342 aa12.43□□□□□ -0.42
UBXN8-206ENST00000613013 CCNL1Q9UK58 526 aaPredicted RBP12.43□□□□□ -0.42
UBXN8-206ENST00000613013 BOLA1Q9Y3E2 137 aa12.43□□□□□ -0.42
UBXN8-206ENST00000613013 A0A0G2JLW4 131 aa12.42□□□□□ -0.42
UBXN8-206ENST00000613013 FCHSD2O94868 740 aa12.42□□□□□ -0.42
UBXN8-206ENST00000613013 SMIM5Q71RC9 77 aa12.42□□□□□ -0.42
UBXN8-206ENST00000613013 VEGFAP15692 232 aaPredicted RBP12.41□□□□□ -0.42
UBXN8-206ENST00000613013 VEGFBP49765 207 aa12.41□□□□□ -0.42
UBXN8-206ENST00000613013 PRPF38BQ5VTL8 546 aaKnown RBP12.41□□□□□ -0.42
UBXN8-206ENST00000613013 DCAF11Q8TEB1 546 aa12.41□□□□□ -0.42
UBXN8-206ENST00000613013 NUDT16Q96DE0 195 aaKnown RBP12.41□□□□□ -0.42
UBXN8-206ENST00000613013 CARD11Q9BXL7 1154 aa12.41□□□□□ -0.42
UBXN8-206ENST00000613013 PXDNLA1KZ92 1463 aa12.4□□□□□ -0.42
UBXN8-206ENST00000613013 G3V3G9 751 aa12.4□□□□□ -0.42
UBXN8-206ENST00000613013 CFAP70Q5T0N1 1121 aa12.4□□□□□ -0.42
UBXN8-206ENST00000613013 CNTNAP1P78357 1384 aa12.4□□□□□ -0.42
UBXN8-206ENST00000613013 ACEP12821 1306 aa12.39□□□□□ -0.43
UBXN8-206ENST00000613013 WNK3Q9BYP7 1800 aa12.39□□□□□ -0.43
UBXN8-206ENST00000613013 FLAD1Q8NFF5 587 aa12.39□□□□□ -0.43
UBXN8-206ENST00000613013 TMEM121BQ9BXQ6 578 aaPredicted RBP12.39□□□□□ -0.43
UBXN8-206ENST00000613013 CCDC184Q52MB2 194 aa12.38□□□□□ -0.43
UBXN8-206ENST00000613013 STAC3Q96MF2 364 aa12.38□□□□□ -0.43
UBXN8-206ENST00000613013 C14orf93Q9H972 538 aaKnown RBP12.38□□□□□ -0.43
UBXN8-206ENST00000613013 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.38□□□□□ -0.43
UBXN8-206ENST00000613013 TRAK1Q9UPV9 953 aa12.38□□□□□ -0.43
UBXN8-206ENST00000613013 KTN1Q86UP2 1357 aaKnown RBP12.38□□□□□ -0.43
UBXN8-206ENST00000613013 DLL1O00548 723 aa12.37□□□□□ -0.43
UBXN8-206ENST00000613013 PPP1R37O75864 691 aa12.37□□□□□ -0.43
UBXN8-206ENST00000613013 PRIM1P49642 420 aaKnown RBP12.37□□□□□ -0.43
UBXN8-206ENST00000613013 C3orf67Q6ZVT6 689 aa12.37□□□□□ -0.43
UBXN8-206ENST00000613013 MICALL2Q8IY33 904 aa12.37□□□□□ -0.43
UBXN8-206ENST00000613013 KDM2AQ9Y2K7 1162 aa12.37□□□□□ -0.43
UBXN8-206ENST00000613013 ST20-MTHFSA0A0A6YYL1 179 aa12.36□□□□□ -0.43
UBXN8-206ENST00000613013 HNRNPUQ00839 825 aaKnown RBP eCLIP12.36□□□□□ -0.43
UBXN8-206ENST00000613013 DDX54Q8TDD1 881 aaKnown RBP12.36□□□□□ -0.43
UBXN8-206ENST00000613013 PIK3C2GO75747 1445 aa12.36□□□□□ -0.43
UBXN8-206ENST00000613013 PPIP5K1Q6PFW1 1433 aa12.36□□□□□ -0.43
UBXN8-206ENST00000613013 TNRC6CQ9HCJ0 1690 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms