RNA–Protein interactions for RNA: ENST00000612985.1

RNVU1-4-201, Transcript of RNA, variant U1 small nuclear 4, humanhuman

BASIC

Gene RNVU1-4, Length 164 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNVU1-4-201ENST00000612985 ZC3H6P61129 1189 aaKnown RBP4.47□□□□□ -1.69
RNVU1-4-201ENST00000612985 NUCB2P80303 420 aa4.47□□□□□ -1.69
RNVU1-4-201ENST00000612985 HDAC1Q13547 482 aaPredicted RBP4.47□□□□□ -1.69
RNVU1-4-201ENST00000612985 CHRNA2Q15822 529 aa4.47□□□□□ -1.69
RNVU1-4-201ENST00000612985 CCDC27Q2M243 656 aa4.47□□□□□ -1.69
RNVU1-4-201ENST00000612985 NME9Q86XW9 330 aa4.47□□□□□ -1.69
RNVU1-4-201ENST00000612985 WDR63Q8IWG1 891 aa4.47□□□□□ -1.69
RNVU1-4-201ENST00000612985 SYAP1Q96A49 352 aaPredicted RBP4.47□□□□□ -1.69
RNVU1-4-201ENST00000612985 CCDC94Q9BW85 323 aaPredicted RBP4.47□□□□□ -1.69
RNVU1-4-201ENST00000612985 GZF1Q9H116 711 aaPredicted RBP4.47□□□□□ -1.69
RNVU1-4-201ENST00000612985 PRDM11Q9NQV5 511 aa4.47□□□□□ -1.69
RNVU1-4-201ENST00000612985 AXIN2Q9Y2T1 843 aa4.47□□□□□ -1.69
RNVU1-4-201ENST00000612985 NSD2O96028 1365 aa4.47□□□□□ -1.69
RNVU1-4-201ENST00000612985 ERBB4Q15303 1308 aa4.46□□□□□ -1.69
RNVU1-4-201ENST00000612985 SPATA31A1Q5TZJ5 1347 aa4.46□□□□□ -1.69
RNVU1-4-201ENST00000612985 PEAK1Q9H792 1746 aa4.46□□□□□ -1.69
RNVU1-4-201ENST00000612985 ANKRD26Q9UPS8 1709 aa4.46□□□□□ -1.69
RNVU1-4-201ENST00000612985 K7ELQ4 463 aaPredicted RBP4.46□□□□□ -1.7
RNVU1-4-201ENST00000612985 MBD3O95983 291 aa4.46□□□□□ -1.7
RNVU1-4-201ENST00000612985 DMTNQ08495 405 aa4.46□□□□□ -1.7
RNVU1-4-201ENST00000612985 KIAA2012Q0VF49 1180 aa4.46□□□□□ -1.7
RNVU1-4-201ENST00000612985 CHAF1AQ13111 956 aaPredicted RBP4.46□□□□□ -1.7
RNVU1-4-201ENST00000612985 MVPQ14764 893 aaKnown RBP4.46□□□□□ -1.7
RNVU1-4-201ENST00000612985 PPP4R3CPQ6ZMV5 832 aa4.46□□□□□ -1.7
RNVU1-4-201ENST00000612985 CREBRFQ8IUR6 639 aa4.46□□□□□ -1.7
RNVU1-4-201ENST00000612985 FTSJ3Q8IY81 847 aaKnown RBP4.46□□□□□ -1.7
RNVU1-4-201ENST00000612985 PDLIM2Q96JY6 352 aa4.46□□□□□ -1.7
RNVU1-4-201ENST00000612985 ARXQ96QS3 562 aa4.46□□□□□ -1.7
RNVU1-4-201ENST00000612985 CARD14Q9BXL6 1004 aa4.46□□□□□ -1.7
RNVU1-4-201ENST00000612985 PRDM4Q9UKN5 801 aa4.46□□□□□ -1.7
RNVU1-4-201ENST00000612985 DDX19BQ9UMR2 479 aa4.46□□□□□ -1.7
RNVU1-4-201ENST00000612985 PDZRN3Q9UPQ7 1066 aa4.46□□□□□ -1.7
RNVU1-4-201ENST00000612985 ZKSCAN5Q9Y2L8 839 aa4.46□□□□□ -1.7
RNVU1-4-201ENST00000612985 DISP2A7MBM2 1401 aa4.46□□□□□ -1.7
RNVU1-4-201ENST00000612985 FAM208AQ9UK61 1670 aaKnown RBP4.45□□□□□ -1.7
RNVU1-4-201ENST00000612985 SBF2Q86WG5 1849 aa4.45□□□□□ -1.7
RNVU1-4-201ENST00000612985 FYB1O15117 783 aa4.45□□□□□ -1.7
RNVU1-4-201ENST00000612985 PLEKHG5O94827 1062 aa4.45□□□□□ -1.7
RNVU1-4-201ENST00000612985 IGHDP01880 384 aa4.45□□□□□ -1.7
RNVU1-4-201ENST00000612985 TPM3P06753 285 aa4.45□□□□□ -1.7
RNVU1-4-201ENST00000612985 HAP1P54257 671 aaPredicted RBP4.45□□□□□ -1.7
RNVU1-4-201ENST00000612985 MFAP1P55081 439 aaKnown RBP4.45□□□□□ -1.7
RNVU1-4-201ENST00000612985 FAM193AP78312 1265 aa4.45□□□□□ -1.7
RNVU1-4-201ENST00000612985 RBM10P98175 930 aaKnown RBP4.45□□□□□ -1.7
RNVU1-4-201ENST00000612985 AMER1Q5JTC6 1135 aaPredicted RBP4.45□□□□□ -1.7
RNVU1-4-201ENST00000612985 ZKSCAN2Q63HK3 967 aa4.45□□□□□ -1.7
RNVU1-4-201ENST00000612985 LARP1Q6PKG0 1096 aaKnown RBP4.45□□□□□ -1.7
RNVU1-4-201ENST00000612985 BARGINQ6ZT62 677 aa4.45□□□□□ -1.7
RNVU1-4-201ENST00000612985 HDGFL2Q7Z4V5 671 aaPredicted RBP4.45□□□□□ -1.7
RNVU1-4-201ENST00000612985 SEPT12Q8IYM1 358 aa4.45□□□□□ -1.7
RNVU1-4-201ENST00000612985 FAM184AQ8NB25 1140 aa4.45□□□□□ -1.7
RNVU1-4-201ENST00000612985 KCNH5Q8NCM2 988 aa4.45□□□□□ -1.7
RNVU1-4-201ENST00000612985 TNPO1Q92973 898 aaKnown RBP4.45□□□□□ -1.7
RNVU1-4-201ENST00000612985 CFAP53Q96M91 514 aa4.45□□□□□ -1.7
RNVU1-4-201ENST00000612985 CWC22Q9HCG8 908 aaKnown RBP4.45□□□□□ -1.7
RNVU1-4-201ENST00000612985 TERF2IPQ9NYB0 399 aa4.45□□□□□ -1.7
RNVU1-4-201ENST00000612985 COG6Q9Y2V7 657 aa4.45□□□□□ -1.7
RNVU1-4-201ENST00000612985 DDX49Q9Y6V7 483 aaKnown RBP4.45□□□□□ -1.7
RNVU1-4-201ENST00000612985 TNS1Q9HBL0 1735 aaKnown RBP4.45□□□□□ -1.7
RNVU1-4-201ENST00000612985 LRRC37A3O60309 1634 aa4.45□□□□□ -1.7
RNVU1-4-201ENST00000612985 CRB1P82279 1406 aa4.45□□□□□ -1.7
RNVU1-4-201ENST00000612985 RGPD2P0DJD1 1756 aa4.45□□□□□ -1.7
RNVU1-4-201ENST00000612985 WDR17Q8IZU2 1322 aa4.45□□□□□ -1.7
RNVU1-4-201ENST00000612985 IPO8O15397 1037 aaKnown RBP4.44□□□□□ -1.7
RNVU1-4-201ENST00000612985 SEC24BO95487 1268 aa4.44□□□□□ -1.7
RNVU1-4-201ENST00000612985 GTF2F1P35269 517 aaKnown RBP eCLIP4.44□□□□□ -1.7
RNVU1-4-201ENST00000612985 FGD1P98174 961 aa4.44□□□□□ -1.7
RNVU1-4-201ENST00000612985 RABEP1Q15276 862 aa4.44□□□□□ -1.7
RNVU1-4-201ENST00000612985 FAM98CQ17RN3 349 aaKnown RBP4.44□□□□□ -1.7
RNVU1-4-201ENST00000612985 BMP2KLQ5H9B9 411 aa4.44□□□□□ -1.7
RNVU1-4-201ENST00000612985 CASC1Q6TDU7 716 aa4.44□□□□□ -1.7
RNVU1-4-201ENST00000612985 SKAP1Q86WV1 359 aa4.44□□□□□ -1.7
RNVU1-4-201ENST00000612985 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.44□□□□□ -1.7
RNVU1-4-201ENST00000612985 PDCL2Q8N4E4 241 aa4.44□□□□□ -1.7
RNVU1-4-201ENST00000612985 ZNF428Q96B54 188 aa4.44□□□□□ -1.7
RNVU1-4-201ENST00000612985 RUNDC1Q96C34 613 aa4.44□□□□□ -1.7
RNVU1-4-201ENST00000612985 DIAPH3Q9NSV4 1193 aa4.44□□□□□ -1.7
RNVU1-4-201ENST00000612985 FAM13BQ9NYF5 915 aa4.44□□□□□ -1.7
RNVU1-4-201ENST00000612985 THRAP3Q9Y2W1 955 aaKnown RBP4.44□□□□□ -1.7
RNVU1-4-201ENST00000612985 R3HCC1Q9Y3T6 440 aaKnown RBP4.44□□□□□ -1.7
RNVU1-4-201ENST00000612985 NSD3Q9BZ95 1437 aa4.44□□□□□ -1.7
RNVU1-4-201ENST00000612985 ERBB3P21860 1342 aa4.44□□□□□ -1.7
RNVU1-4-201ENST00000612985 SHANK3Q9BYB0 1731 aa4.43□□□□□ -1.7
RNVU1-4-201ENST00000612985 CCDC66A2RUB6 948 aa4.43□□□□□ -1.7
RNVU1-4-201ENST00000612985 APAF1O14727 1248 aa4.43□□□□□ -1.7
RNVU1-4-201ENST00000612985 BCAR3O75815 825 aa4.43□□□□□ -1.7
RNVU1-4-201ENST00000612985 KCNA4P22459 653 aa4.43□□□□□ -1.7
RNVU1-4-201ENST00000612985 FBLN1P23142 703 aa4.43□□□□□ -1.7
RNVU1-4-201ENST00000612985 RARSP54136 660 aaKnown RBP4.43□□□□□ -1.7
RNVU1-4-201ENST00000612985 RIPK4P57078 832 aa4.43□□□□□ -1.7
RNVU1-4-201ENST00000612985 KRT27Q7Z3Y8 459 aa4.43□□□□□ -1.7
RNVU1-4-201ENST00000612985 WWC1Q8IX03 1113 aa4.43□□□□□ -1.7
RNVU1-4-201ENST00000612985 DZIP1LQ8IYY4 767 aaKnown RBP4.43□□□□□ -1.7
RNVU1-4-201ENST00000612985 MYRIPQ8NFW9 859 aa4.43□□□□□ -1.7
RNVU1-4-201ENST00000612985 IP6K1Q92551 441 aa4.43□□□□□ -1.7
RNVU1-4-201ENST00000612985 GCC1Q96CN9 775 aa4.43□□□□□ -1.7
RNVU1-4-201ENST00000612985 TSPYL1Q9H0U9 437 aa4.43□□□□□ -1.7
RNVU1-4-201ENST00000612985 GGNBP2Q9H3C7 697 aa4.43□□□□□ -1.7
RNVU1-4-201ENST00000612985 STRN4Q9NRL3 753 aa4.43□□□□□ -1.7
RNVU1-4-201ENST00000612985 KIF3AQ9Y496 699 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms