RNA–Protein interactions for RNA: ENST00000612624.4

SMIM11B-201, Transcript of small integral membrane protein 11B, humanhuman

TSL 1 (best) BASIC

Gene SMIM11B, Length 1,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11B-201ENST00000612624 TMF1P82094 1093 aa11.03□□□□□ -0.64
SMIM11B-201ENST00000612624 WWC3Q9ULE0 1092 aa11.03□□□□□ -0.64
SMIM11B-201ENST00000612624 WASHC2AQ641Q2 1341 aa11.03□□□□□ -0.64
SMIM11B-201ENST00000612624 A0A1W2PP64 1363 aa11.03□□□□□ -0.64
SMIM11B-201ENST00000612624 USP6P35125 1406 aa11.02□□□□□ -0.64
SMIM11B-201ENST00000612624 ZNF827Q17R98 1081 aa11.02□□□□□ -0.65
SMIM11B-201ENST00000612624 NGDNQ8NEJ9 315 aaKnown RBP11.02□□□□□ -0.65
SMIM11B-201ENST00000612624 RGPD5Q99666 1765 aa11.02□□□□□ -0.65
SMIM11B-201ENST00000612624 CCDC7Q96M83 1385 aa11.02□□□□□ -0.65
SMIM11B-201ENST00000612624 ERICH6Q7L0X2 663 aa11.01□□□□□ -0.65
SMIM11B-201ENST00000612624 TIE1P35590 1138 aa11□□□□□ -0.65
SMIM11B-201ENST00000612624 MKRN3Q13064 507 aaKnown RBP11□□□□□ -0.65
SMIM11B-201ENST00000612624 TMC1Q8TDI8 760 aa11□□□□□ -0.65
SMIM11B-201ENST00000612624 PUS7Q96PZ0 661 aaKnown RBP11□□□□□ -0.65
SMIM11B-201ENST00000612624 POLR3GLQ9BT43 218 aa11□□□□□ -0.65
SMIM11B-201ENST00000612624 CD2APQ9Y5K6 639 aa11□□□□□ -0.65
SMIM11B-201ENST00000612624 LTN1O94822 1766 aa11□□□□□ -0.65
SMIM11B-201ENST00000612624 EVX2Q03828 476 aa10.99□□□□□ -0.65
SMIM11B-201ENST00000612624 RBM46Q8TBY0 533 aaKnown RBP10.99□□□□□ -0.65
SMIM11B-201ENST00000612624 ZNF526Q8TF50 670 aaPredicted RBP10.99□□□□□ -0.65
SMIM11B-201ENST00000612624 PNPLA7Q6ZV29 1317 aa10.99□□□□□ -0.65
SMIM11B-201ENST00000612624 PCNTO95613 3336 aa10.98□□□□□ -0.65
SMIM11B-201ENST00000612624 TTLL13PA6NNM8 815 aa10.98□□□□□ -0.65
SMIM11B-201ENST00000612624 SLC27A3Q5K4L6 730 aa10.98□□□□□ -0.65
SMIM11B-201ENST00000612624 CARD14Q9BXL6 1004 aa10.98□□□□□ -0.65
SMIM11B-201ENST00000612624 KTN1Q86UP2 1357 aaKnown RBP10.98□□□□□ -0.65
SMIM11B-201ENST00000612624 ANKRD36BQ8N2N9 1353 aa10.98□□□□□ -0.65
SMIM11B-201ENST00000612624 GCP02774 474 aa10.97□□□□□ -0.65
SMIM11B-201ENST00000612624 FSTL1Q12841 308 aa10.97□□□□□ -0.65
SMIM11B-201ENST00000612624 E2F4Q16254 413 aa10.97□□□□□ -0.65
SMIM11B-201ENST00000612624 SLIT3O75094 1523 aa10.97□□□□□ -0.65
SMIM11B-201ENST00000612624 COL18A1P39060 1754 aa10.97□□□□□ -0.65
SMIM11B-201ENST00000612624 MAP2P11137 1827 aaKnown RBP10.97□□□□□ -0.65
SMIM11B-201ENST00000612624 QSER1Q2KHR3 1735 aa10.96□□□□□ -0.65
SMIM11B-201ENST00000612624 NSD3Q9BZ95 1437 aa10.96□□□□□ -0.65
SMIM11B-201ENST00000612624 TTC21BQ7Z4L5 1316 aa10.96□□□□□ -0.65
SMIM11B-201ENST00000612624 NUTM2GQ5VZR2 741 aa10.96□□□□□ -0.65
SMIM11B-201ENST00000612624 ARHGEF1Q92888 912 aaKnown RBP10.96□□□□□ -0.65
SMIM11B-201ENST00000612624 LRRC4BQ9NT99 713 aa10.96□□□□□ -0.65
SMIM11B-201ENST00000612624 WDR90Q96KV7 1748 aa10.95□□□□□ -0.66
SMIM11B-201ENST00000612624 EDC4Q6P2E9 1401 aaKnown RBP10.95□□□□□ -0.66
SMIM11B-201ENST00000612624 WDR17Q8IZU2 1322 aa10.95□□□□□ -0.66
SMIM11B-201ENST00000612624 BMP2KQ9NSY1 1161 aaPredicted RBP10.95□□□□□ -0.66
SMIM11B-201ENST00000612624 NFAT5O94916 1531 aa10.94□□□□□ -0.66
SMIM11B-201ENST00000612624 TNS2Q63HR2 1409 aa10.94□□□□□ -0.66
SMIM11B-201ENST00000612624 PDE4AP27815 886 aa10.94□□□□□ -0.66
SMIM11B-201ENST00000612624 TOM1L2Q6ZVM7 507 aa10.94□□□□□ -0.66
SMIM11B-201ENST00000612624 NLRP13Q86W25 1043 aa10.94□□□□□ -0.66
SMIM11B-201ENST00000612624 NME9Q86XW9 330 aa10.94□□□□□ -0.66
SMIM11B-201ENST00000612624 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.94□□□□□ -0.66
SMIM11B-201ENST00000612624 CRISPLD2Q9H0B8 497 aa10.94□□□□□ -0.66
SMIM11B-201ENST00000612624 RGPD2P0DJD1 1756 aa10.94□□□□□ -0.66
SMIM11B-201ENST00000612624 NHSQ6T4R5 1651 aa10.93□□□□□ -0.66
SMIM11B-201ENST00000612624 TULP1O00294 542 aaPredicted RBP10.93□□□□□ -0.66
SMIM11B-201ENST00000612624 EXOC5O00471 708 aa10.93□□□□□ -0.66
SMIM11B-201ENST00000612624 MFSD10Q14728 455 aa10.93□□□□□ -0.66
SMIM11B-201ENST00000612624 CDCA8Q53HL2 280 aa10.93□□□□□ -0.66
SMIM11B-201ENST00000612624 LARP6Q9BRS8 491 aaKnown RBP10.93□□□□□ -0.66
SMIM11B-201ENST00000612624 CARD10Q9BWT7 1032 aa10.93□□□□□ -0.66
SMIM11B-201ENST00000612624 PANK3Q9H999 370 aa10.93□□□□□ -0.66
SMIM11B-201ENST00000612624 CICQ96RK0 1608 aaPredicted RBP10.93□□□□□ -0.66
SMIM11B-201ENST00000612624 GALR2O43603 387 aaPredicted RBP10.92□□□□□ -0.66
SMIM11B-201ENST00000612624 HDGFL2Q7Z4V5 671 aaPredicted RBP10.92□□□□□ -0.66
SMIM11B-201ENST00000612624 ABTB2Q8N961 1025 aa10.92□□□□□ -0.66
SMIM11B-201ENST00000612624 C10orf71Q711Q0 1435 aa10.92□□□□□ -0.66
SMIM11B-201ENST00000612624 HSPA1AP0DMV8 641 aaKnown RBP10.91□□□□□ -0.66
SMIM11B-201ENST00000612624 HSPA1BP0DMV9 641 aaKnown RBP10.91□□□□□ -0.66
SMIM11B-201ENST00000612624 TERF2IPQ9NYB0 399 aa10.91□□□□□ -0.66
SMIM11B-201ENST00000612624 TFCP2L1Q9NZI6 479 aa10.91□□□□□ -0.66
SMIM11B-201ENST00000612624 USP31Q70CQ4 1352 aa10.9□□□□□ -0.66
SMIM11B-201ENST00000612624 ABCC6O95255 1503 aa10.9□□□□□ -0.66
SMIM11B-201ENST00000612624 PER1O15534 1290 aaPredicted RBP10.9□□□□□ -0.66
SMIM11B-201ENST00000612624 FBLN1P23142 703 aa10.9□□□□□ -0.66
SMIM11B-201ENST00000612624 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.9□□□□□ -0.66
SMIM11B-201ENST00000612624 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.9□□□□□ -0.66
SMIM11B-201ENST00000612624 TRIM35Q9UPQ4 493 aa10.9□□□□□ -0.66
SMIM11B-201ENST00000612624 TTC21AQ8NDW8 1320 aa10.89□□□□□ -0.67
SMIM11B-201ENST00000612624 FYB1O15117 783 aa10.89□□□□□ -0.67
SMIM11B-201ENST00000612624 DDX27Q96GQ7 796 aaKnown RBP10.89□□□□□ -0.67
SMIM11B-201ENST00000612624 GGNBP2Q9H3C7 697 aa10.89□□□□□ -0.67
SMIM11B-201ENST00000612624 WNK3Q9BYP7 1800 aa10.88□□□□□ -0.67
SMIM11B-201ENST00000612624 HTRA3P83110 453 aa10.88□□□□□ -0.67
SMIM11B-201ENST00000612624 ZNF316A6NFI3 1004 aaPredicted RBP10.87□□□□□ -0.67
SMIM11B-201ENST00000612624 HMGB2P26583 209 aaKnown RBP10.87□□□□□ -0.67
SMIM11B-201ENST00000612624 CLCN6P51797 869 aa10.87□□□□□ -0.67
SMIM11B-201ENST00000612624 DDX10Q13206 875 aaKnown RBP10.86□□□□□ -0.67
SMIM11B-201ENST00000612624 NMRK2Q9NPI5 230 aa10.86□□□□□ -0.67
SMIM11B-201ENST00000612624 PRDM10Q9NQV6 1147 aa10.86□□□□□ -0.67
SMIM11B-201ENST00000612624 AXIN2Q9Y2T1 843 aa10.86□□□□□ -0.67
SMIM11B-201ENST00000612624 IGSF1Q8N6C5 1336 aa10.85□□□□□ -0.67
SMIM11B-201ENST00000612624 ACSBG1Q96GR2 724 aa10.85□□□□□ -0.67
SMIM11B-201ENST00000612624 SEMA3EO15041 775 aa10.84□□□□□ -0.67
SMIM11B-201ENST00000612624 RGS19P49795 217 aa10.84□□□□□ -0.67
SMIM11B-201ENST00000612624 CNGB1Q14028 1251 aaPredicted RBP10.84□□□□□ -0.67
SMIM11B-201ENST00000612624 FAM161AQ3B820 660 aa10.84□□□□□ -0.67
SMIM11B-201ENST00000612624 COL23A1Q86Y22 540 aaPredicted RBP10.84□□□□□ -0.67
SMIM11B-201ENST00000612624 C16orf71Q8IYS4 520 aaPredicted RBP10.84□□□□□ -0.67
SMIM11B-201ENST00000612624 FLAD1Q8NFF5 587 aa10.84□□□□□ -0.67
SMIM11B-201ENST00000612624 PLEKHG2Q9H7P9 1386 aa10.84□□□□□ -0.67
SMIM11B-201ENST00000612624 PXDNLA1KZ92 1463 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms