RNA–Protein interactions for RNA: ENST00000612540.1

PRKN-210, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-210ENST00000612540 WDR63Q8IWG1 891 aa16.73■□□□□ 0.27
PRKN-210ENST00000612540 KDM6AO15550 1401 aaPredicted RBP16.72■□□□□ 0.27
PRKN-210ENST00000612540 TEFQ10587 303 aa16.72■□□□□ 0.27
PRKN-210ENST00000612540 IL17REQ8NFR9 667 aa16.72■□□□□ 0.27
PRKN-210ENST00000612540 CDCA7LQ96GN5 454 aa16.72■□□□□ 0.27
PRKN-210ENST00000612540 DCAF5Q96JK2 942 aa16.72■□□□□ 0.27
PRKN-210ENST00000612540 LGR6Q9HBX8 967 aa16.72■□□□□ 0.27
PRKN-210ENST00000612540 ADAMTS7Q9UKP4 1686 aa16.72■□□□□ 0.27
PRKN-210ENST00000612540 IL16Q14005 1332 aa16.7■□□□□ 0.26
PRKN-210ENST00000612540 DOT1LQ8TEK3 1739 aa16.7■□□□□ 0.26
PRKN-210ENST00000612540 TOGARAM1Q9Y4F4 1720 aa16.7■□□□□ 0.26
PRKN-210ENST00000612540 E9PSI1 815 aa16.7■□□□□ 0.26
PRKN-210ENST00000612540 CENPBP07199 599 aaPredicted RBP16.7■□□□□ 0.26
PRKN-210ENST00000612540 NBPF14Q5TI25 921 aa16.7■□□□□ 0.26
PRKN-210ENST00000612540 BCL9O00512 1426 aa16.7■□□□□ 0.26
PRKN-210ENST00000612540 CEMIPQ8WUJ3 1361 aa16.69■□□□□ 0.26
PRKN-210ENST00000612540 PLSCR1O15162 318 aa16.69■□□□□ 0.26
PRKN-210ENST00000612540 GNAI1P63096 354 aa16.69■□□□□ 0.26
PRKN-210ENST00000612540 MARCH10Q8NA82 808 aaPredicted RBP16.69■□□□□ 0.26
PRKN-210ENST00000612540 MYH16Q9H6N6 1097 aa16.69■□□□□ 0.26
PRKN-210ENST00000612540 SIPA1L3O60292 1781 aaPredicted RBP16.69■□□□□ 0.26
PRKN-210ENST00000612540 ITGB4P16144 1822 aa16.68■□□□□ 0.26
PRKN-210ENST00000612540 CABP4P57796 275 aa16.68■□□□□ 0.26
PRKN-210ENST00000612540 SLFN5Q08AF3 891 aa16.68■□□□□ 0.26
PRKN-210ENST00000612540 SPINK5Q9NQ38 1064 aaPredicted RBP16.68■□□□□ 0.26
PRKN-210ENST00000612540 IFT57Q9NWB7 429 aa16.68■□□□□ 0.26
PRKN-210ENST00000612540 CASZ1Q86V15 1759 aa16.67■□□□□ 0.26
PRKN-210ENST00000612540 NKX1-1Q15270 411 aaPredicted RBP16.67■□□□□ 0.26
PRKN-210ENST00000612540 PTF1AQ7RTS3 328 aa16.67■□□□□ 0.26
PRKN-210ENST00000612540 TSR2Q969E8 191 aaKnown RBP16.67■□□□□ 0.26
PRKN-210ENST00000612540 BCL11BQ9C0K0 894 aaPredicted RBP16.67■□□□□ 0.26
PRKN-210ENST00000612540 MRC1P22897 1456 aa16.67■□□□□ 0.26
PRKN-210ENST00000612540 TAF7Q15545 349 aaPredicted RBP16.66■□□□□ 0.26
PRKN-210ENST00000612540 TSPYL4Q9UJ04 414 aa16.66■□□□□ 0.26
PRKN-210ENST00000612540 FANCIQ9NVI1 1328 aa16.66■□□□□ 0.26
PRKN-210ENST00000612540 SYTL4Q96C24 671 aaPredicted RBP16.65■□□□□ 0.26
PRKN-210ENST00000612540 CFAP44Q96MT7 982 aa16.65■□□□□ 0.26
PRKN-210ENST00000612540 SLC52A2Q9HAB3 445 aa16.65■□□□□ 0.26
PRKN-210ENST00000612540 MIS18AQ9NYP9 233 aa16.65■□□□□ 0.26
PRKN-210ENST00000612540 KDM3BQ7LBC6 1761 aa16.64■□□□□ 0.25
PRKN-210ENST00000612540 ERVV-2B6SEH9 535 aa16.64■□□□□ 0.25
PRKN-210ENST00000612540 ACSBG1Q96GR2 724 aa16.64■□□□□ 0.25
PRKN-210ENST00000612540 MBIPQ9NS73 344 aa16.64■□□□□ 0.25
PRKN-210ENST00000612540 TMOD3Q9NYL9 352 aa16.64■□□□□ 0.25
PRKN-210ENST00000612540 BTBD11A6QL63 1104 aa16.63■□□□□ 0.25
PRKN-210ENST00000612540 ZNF853P0CG23 659 aa16.63■□□□□ 0.25
PRKN-210ENST00000612540 DUSP27Q5VZP5 1158 aa16.63■□□□□ 0.25
PRKN-210ENST00000612540 NFATC2IPQ8NCF5 419 aa16.63■□□□□ 0.25
PRKN-210ENST00000612540 NHSQ6T4R5 1651 aa16.62■□□□□ 0.25
PRKN-210ENST00000612540 CHL1O00533 1208 aa16.62■□□□□ 0.25
PRKN-210ENST00000612540 PROM2Q8N271 834 aa16.62■□□□□ 0.25
PRKN-210ENST00000612540 ANO8Q9HCE9 1232 aaPredicted RBP16.62■□□□□ 0.25
PRKN-210ENST00000612540 PRIM1P49642 420 aaKnown RBP16.61■□□□□ 0.25
PRKN-210ENST00000612540 BTAF1O14981 1849 aa16.61■□□□□ 0.25
PRKN-210ENST00000612540 KCNQ2O43526 872 aa16.6■□□□□ 0.25
PRKN-210ENST00000612540 EXOSC9Q06265 439 aaKnown RBP16.6■□□□□ 0.25
PRKN-210ENST00000612540 TRMT2AQ8IZ69 625 aaKnown RBP16.6■□□□□ 0.25
PRKN-210ENST00000612540 TTC5Q8N0Z6 440 aa16.6■□□□□ 0.25
PRKN-210ENST00000612540 SPON1Q9HCB6 807 aa16.6■□□□□ 0.25
PRKN-210ENST00000612540 BABAM1Q9NWV8 329 aa16.6■□□□□ 0.25
PRKN-210ENST00000612540 SLC39A6Q13433 755 aa16.59■□□□□ 0.25
PRKN-210ENST00000612540 PAPPAQ13219 1627 aa16.59■□□□□ 0.25
PRKN-210ENST00000612540 KCNQ3O43525 872 aa16.58■□□□□ 0.24
PRKN-210ENST00000612540 PIGBQ92521 554 aa16.58■□□□□ 0.24
PRKN-210ENST00000612540 PPP1R1BQ9UD71 204 aaPredicted RBP16.58■□□□□ 0.24
PRKN-210ENST00000612540 TXNRD1Q16881 649 aa16.57■□□□□ 0.24
PRKN-210ENST00000612540 ELL2O00472 640 aaPredicted RBP16.56■□□□□ 0.24
PRKN-210ENST00000612540 KRT24Q2M2I5 525 aa16.56■□□□□ 0.24
PRKN-210ENST00000612540 ZNF790Q6PG37 636 aa16.56■□□□□ 0.24
PRKN-210ENST00000612540 UBR2Q8IWV8 1755 aa16.56■□□□□ 0.24
PRKN-210ENST00000612540 PDGFDQ9GZP0 370 aaPredicted RBP16.55■□□□□ 0.24
PRKN-210ENST00000612540 EIF4A1P60842 406 aaKnown RBP16.54■□□□□ 0.24
PRKN-210ENST00000612540 TWISTNBQ3B726 338 aaPredicted RBP16.54■□□□□ 0.24
PRKN-210ENST00000612540 C8orf58Q8NAV2 365 aa16.54■□□□□ 0.24
PRKN-210ENST00000612540 ASAP1Q9ULH1 1129 aa16.54■□□□□ 0.24
PRKN-210ENST00000612540 PTCD1O75127 700 aaKnown RBP16.53■□□□□ 0.24
PRKN-210ENST00000612540 TSPYL6Q8N831 410 aa16.53■□□□□ 0.24
PRKN-210ENST00000612540 FMNL2Q96PY5 1086 aa16.53■□□□□ 0.24
PRKN-210ENST00000612540 C5P01031 1676 aa16.53■□□□□ 0.24
PRKN-210ENST00000612540 UTRNP46939 3433 aa16.52■□□□□ 0.24
PRKN-210ENST00000612540 KCPQ6ZWJ8 1503 aa16.52■□□□□ 0.24
PRKN-210ENST00000612540 SLC15A2Q16348 729 aa16.52■□□□□ 0.24
PRKN-210ENST00000612540 ZNF496Q96IT1 587 aaPredicted RBP16.52■□□□□ 0.24
PRKN-210ENST00000612540 RBM42Q9BTD8 480 aaKnown RBP16.52■□□□□ 0.24
PRKN-210ENST00000612540 ATG3Q9NT62 314 aa16.52■□□□□ 0.24
PRKN-210ENST00000612540 STK32BQ9NY57 414 aa16.52■□□□□ 0.24
PRKN-210ENST00000612540 RCAN3Q9UKA8 241 aa16.52■□□□□ 0.24
PRKN-210ENST00000612540 TUBGCP6Q96RT7 1819 aa16.52■□□□□ 0.23
PRKN-210ENST00000612540 CHD4Q14839 1912 aa16.51■□□□□ 0.23
PRKN-210ENST00000612540 CT47B1P0C2W7 299 aaPredicted RBP16.51■□□□□ 0.23
PRKN-210ENST00000612540 LAMB4A4D0S4 1761 aa16.51■□□□□ 0.23
PRKN-210ENST00000612540 PALLDQ8WX93 1383 aa16.51■□□□□ 0.23
PRKN-210ENST00000612540 ZBTB7AO95365 584 aa16.5■□□□□ 0.23
PRKN-210ENST00000612540 SMARCC1Q92922 1105 aaPredicted RBP16.5■□□□□ 0.23
PRKN-210ENST00000612540 HEG1Q9ULI3 1381 aa16.5■□□□□ 0.23
PRKN-210ENST00000612540 VAMP4O75379 141 aa16.49■□□□□ 0.23
PRKN-210ENST00000612540 PTGER2P43116 358 aa16.49■□□□□ 0.23
PRKN-210ENST00000612540 QSER1Q2KHR3 1735 aa16.49■□□□□ 0.23
PRKN-210ENST00000612540 NECTIN2Q92692 538 aa16.49■□□□□ 0.23
PRKN-210ENST00000612540 TCERG1O14776 1098 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms