RNA–Protein interactions for RNA: ENST00000612455.1

CCND3-222, Transcript of cyclin D3, humanhuman

Gene CCND3, Length 536 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-222ENST00000612455 U2AF1L5P0DN76 240 aaPredicted RBP22.36■■□□□ 1.17
CCND3-222ENST00000612455 PRKAR2BP31323 418 aa22.36■■□□□ 1.17
CCND3-222ENST00000612455 U2AF1Q01081 240 aaKnown RBP eCLIP22.36■■□□□ 1.17
CCND3-222ENST00000612455 GAS2L2Q8NHY3 880 aa22.36■■□□□ 1.17
CCND3-222ENST00000612455 PHACTR3Q96KR7 559 aa22.36■■□□□ 1.17
CCND3-222ENST00000612455 TFCP2L1Q9NZI6 479 aa22.36■■□□□ 1.17
CCND3-222ENST00000612455 SLC16A10Q8TF71 515 aa22.35■■□□□ 1.17
CCND3-222ENST00000612455 SLC52A2Q9HAB3 445 aa22.35■■□□□ 1.17
CCND3-222ENST00000612455 ZNF831Q5JPB2 1677 aa22.35■■□□□ 1.17
CCND3-222ENST00000612455 ZBTB7AO95365 584 aa22.34■■□□□ 1.17
CCND3-222ENST00000612455 SLC4A9Q96Q91 983 aa22.34■■□□□ 1.17
CCND3-222ENST00000612455 MTFR1LQ9H019 292 aa22.34■■□□□ 1.17
CCND3-222ENST00000612455 PTGER2P43116 358 aa22.33■■□□□ 1.17
CCND3-222ENST00000612455 ITPK1Q13572 414 aa22.33■■□□□ 1.17
CCND3-222ENST00000612455 SGIP1Q9BQI5 828 aa22.33■■□□□ 1.17
CCND3-222ENST00000612455 GNAT3A8MTJ3 354 aa22.32■■□□□ 1.16
CCND3-222ENST00000612455 ATP6V1AP38606 617 aa22.32■■□□□ 1.16
CCND3-222ENST00000612455 LINC00116Q8NCU8 138 aa22.32■■□□□ 1.16
CCND3-222ENST00000612455 ATF5Q9Y2D1 282 aaPredicted RBP22.32■■□□□ 1.16
CCND3-222ENST00000612455 MRC1P22897 1456 aa22.32■■□□□ 1.16
CCND3-222ENST00000612455 C4BP0C0L5 1744 aa22.31■■□□□ 1.16
CCND3-222ENST00000612455 IL17REQ8NFR9 667 aa22.31■■□□□ 1.16
CCND3-222ENST00000612455 MAP3K5Q99683 1374 aa22.3■■□□□ 1.16
CCND3-222ENST00000612455 COL23A1Q86Y22 540 aaPredicted RBP22.3■■□□□ 1.16
CCND3-222ENST00000612455 COL24A1Q17RW2 1714 aa22.3■■□□□ 1.16
CCND3-222ENST00000612455 MYBBP1AQ9BQG0 1328 aaKnown RBP22.3■■□□□ 1.16
CCND3-222ENST00000612455 FLAD1Q8NFF5 587 aa22.29■■□□□ 1.16
CCND3-222ENST00000612455 RBM42Q9BTD8 480 aaKnown RBP22.29■■□□□ 1.16
CCND3-222ENST00000612455 UBR3Q6ZT12 1888 aa22.28■■□□□ 1.16
CCND3-222ENST00000612455 ZNF316A6NFI3 1004 aaPredicted RBP22.28■■□□□ 1.16
CCND3-222ENST00000612455 PRKRIP1Q9H875 184 aaPredicted RBP22.28■■□□□ 1.16
CCND3-222ENST00000612455 RC3H1Q5TC82 1133 aaKnown RBP22.27■■□□□ 1.16
CCND3-222ENST00000612455 PLEKHF1Q96S99 279 aa22.27■■□□□ 1.16
CCND3-222ENST00000612455 CEMIPQ8WUJ3 1361 aa22.26■■□□□ 1.15
CCND3-222ENST00000612455 AMIGO3Q86WK7 504 aa22.26■■□□□ 1.15
CCND3-222ENST00000612455 AK7Q96M32 723 aa22.26■■□□□ 1.15
CCND3-222ENST00000612455 PTCD1O75127 700 aaKnown RBP22.25■■□□□ 1.15
CCND3-222ENST00000612455 COL5A3P25940 1745 aaPredicted RBP22.24■■□□□ 1.15
CCND3-222ENST00000612455 HTATSF1O43719 755 aaKnown RBP22.24■■□□□ 1.15
CCND3-222ENST00000612455 SLC39A6Q13433 755 aa22.24■■□□□ 1.15
CCND3-222ENST00000612455 PPP1R1BQ9UD71 204 aaPredicted RBP22.24■■□□□ 1.15
CCND3-222ENST00000612455 CICQ96RK0 1608 aaPredicted RBP22.24■■□□□ 1.15
CCND3-222ENST00000612455 SIPA1L3O60292 1781 aaPredicted RBP22.23■■□□□ 1.15
CCND3-222ENST00000612455 SSFA2P28290 1259 aa22.23■■□□□ 1.15
CCND3-222ENST00000612455 MYH14Q7Z406 1995 aaKnown RBP22.23■■□□□ 1.15
CCND3-222ENST00000612455 TEFQ10587 303 aa22.22■■□□□ 1.15
CCND3-222ENST00000612455 PNNQ9H307 717 aaKnown RBP22.22■■□□□ 1.15
CCND3-222ENST00000612455 CNTNAP4Q9C0A0 1308 aa22.22■■□□□ 1.15
CCND3-222ENST00000612455 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.21■■□□□ 1.15
CCND3-222ENST00000612455 RPS6KA4O75676 772 aa22.2■■□□□ 1.14
CCND3-222ENST00000612455 SMIM5Q71RC9 77 aa22.2■■□□□ 1.14
CCND3-222ENST00000612455 VSIG10Q8N0Z9 540 aa22.2■■□□□ 1.14
CCND3-222ENST00000612455 KCPQ6ZWJ8 1503 aa22.2■■□□□ 1.14
CCND3-222ENST00000612455 TJP1Q07157 1748 aa22.2■■□□□ 1.14
CCND3-222ENST00000612455 GNPATO15228 680 aa22.19■■□□□ 1.14
CCND3-222ENST00000612455 MSH5O43196 834 aa22.19■■□□□ 1.14
CCND3-222ENST00000612455 ARXQ96QS3 562 aa22.19■■□□□ 1.14
CCND3-222ENST00000612455 UBR2Q8IWV8 1755 aa22.19■■□□□ 1.14
CCND3-222ENST00000612455 DLG5Q8TDM6 1919 aa22.18■■□□□ 1.14
CCND3-222ENST00000612455 NEFMP07197 916 aa22.18■■□□□ 1.14
CCND3-222ENST00000612455 ZNF790Q6PG37 636 aa22.18■■□□□ 1.14
CCND3-222ENST00000612455 RTF1Q92541 710 aaKnown RBP22.18■■□□□ 1.14
CCND3-222ENST00000612455 RTCBQ9Y3I0 505 aaKnown RBP22.18■■□□□ 1.14
CCND3-222ENST00000612455 POLD1P28340 1107 aa22.17■■□□□ 1.14
CCND3-222ENST00000612455 MCM10Q7L590 875 aa22.17■■□□□ 1.14
CCND3-222ENST00000612455 DNAJC10Q8IXB1 793 aa22.17■■□□□ 1.14
CCND3-222ENST00000612455 PHF14O94880 888 aa22.16■■□□□ 1.14
CCND3-222ENST00000612455 ADRA2BP18089 450 aa22.16■■□□□ 1.14
CCND3-222ENST00000612455 CRKLP46109 303 aaKnown RBP22.16■■□□□ 1.14
CCND3-222ENST00000612455 NFE2L2Q16236 605 aa22.16■■□□□ 1.14
CCND3-222ENST00000612455 INTS5Q6P9B9 1019 aaKnown RBP22.16■■□□□ 1.14
CCND3-222ENST00000612455 CYP19A1P11511 503 aaPredicted RBP22.15■■□□□ 1.14
CCND3-222ENST00000612455 DCTN1Q14203 1278 aa22.15■■□□□ 1.14
CCND3-222ENST00000612455 TRAPPC3LQ5T215 181 aa22.15■■□□□ 1.14
CCND3-222ENST00000612455 TTC5Q8N0Z6 440 aa22.14■■□□□ 1.13
CCND3-222ENST00000612455 ARHGEF1Q92888 912 aaKnown RBP22.14■■□□□ 1.13
CCND3-222ENST00000612455 ZNF496Q96IT1 587 aaPredicted RBP22.14■■□□□ 1.13
CCND3-222ENST00000612455 SYT17Q9BSW7 474 aa22.14■■□□□ 1.13
CCND3-222ENST00000612455 FHDC1Q9C0D6 1143 aaPredicted RBP22.14■■□□□ 1.13
CCND3-222ENST00000612455 BTBD11A6QL63 1104 aa22.13■■□□□ 1.13
CCND3-222ENST00000612455 KCNQ3O43525 872 aa22.12■■□□□ 1.13
CCND3-222ENST00000612455 MSL1Q68DK7 614 aa22.12■■□□□ 1.13
CCND3-222ENST00000612455 HEG1Q9ULI3 1381 aa22.12■■□□□ 1.13
CCND3-222ENST00000612455 MAPK8IP3Q9UPT6 1336 aa22.11■■□□□ 1.13
CCND3-222ENST00000612455 TAF7Q15545 349 aaPredicted RBP22.11■■□□□ 1.13
CCND3-222ENST00000612455 CCDC87Q9NVE4 849 aa22.11■■□□□ 1.13
CCND3-222ENST00000612455 ADAMTS8Q9UP79 889 aa22.11■■□□□ 1.13
CCND3-222ENST00000612455 FMNL2Q96PY5 1086 aa22.1■■□□□ 1.13
CCND3-222ENST00000612455 TEX13AQ9BXU3 409 aaPredicted RBP22.1■■□□□ 1.13
CCND3-222ENST00000612455 RFC4P35249 363 aa22.08■■□□□ 1.13
CCND3-222ENST00000612455 TMPOP42166 694 aaKnown RBP22.08■■□□□ 1.13
CCND3-222ENST00000612455 WDR43Q15061 677 aaKnown RBP eCLIP22.08■■□□□ 1.13
CCND3-222ENST00000612455 STARD3NLO95772 234 aa22.07■■□□□ 1.12
CCND3-222ENST00000612455 NLGN1Q8N2Q7 840 aa22.07■■□□□ 1.12
CCND3-222ENST00000612455 RUNDC1Q96C34 613 aa22.07■■□□□ 1.12
CCND3-222ENST00000612455 SOS1Q07889 1333 aaPredicted RBP22.06■■□□□ 1.12
CCND3-222ENST00000612455 GYS1P13807 737 aa22.06■■□□□ 1.12
CCND3-222ENST00000612455 RIPK4P57078 832 aa22.06■■□□□ 1.12
CCND3-222ENST00000612455 ZBTB1Q9Y2K1 713 aa22.06■■□□□ 1.12
CCND3-222ENST00000612455 C4AP0C0L4 1744 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms