RNA–Protein interactions for RNA: ENST00000612355.1

PPARGC1A-216, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 5 BASIC

Gene PPARGC1A, Length 936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-216ENST00000612355 TESK2Q96S53 571 aa13.92□□□□□ -0.18
PPARGC1A-216ENST00000612355 SBF1O95248 1867 aa13.91□□□□□ -0.18
PPARGC1A-216ENST00000612355 KDRP35968 1356 aa13.91□□□□□ -0.18
PPARGC1A-216ENST00000612355 FYB1O15117 783 aa13.9□□□□□ -0.18
PPARGC1A-216ENST00000612355 GNPATO15228 680 aa13.9□□□□□ -0.18
PPARGC1A-216ENST00000612355 FSTL1Q12841 308 aa13.9□□□□□ -0.18
PPARGC1A-216ENST00000612355 HSP90AB2PQ58FF8 381 aa13.9□□□□□ -0.18
PPARGC1A-216ENST00000612355 NEUROD1Q13562 356 aa13.89□□□□□ -0.19
PPARGC1A-216ENST00000612355 ITPK1Q13572 414 aa13.89□□□□□ -0.19
PPARGC1A-216ENST00000612355 BCS1LQ9Y276 419 aa13.89□□□□□ -0.19
PPARGC1A-216ENST00000612355 MYH14Q7Z406 1995 aaKnown RBP13.89□□□□□ -0.19
PPARGC1A-216ENST00000612355 PRELPP51888 382 aa13.88□□□□□ -0.19
PPARGC1A-216ENST00000612355 TONSLQ96HA7 1378 aa13.87□□□□□ -0.19
PPARGC1A-216ENST00000612355 KCPQ6ZWJ8 1503 aa13.87□□□□□ -0.19
PPARGC1A-216ENST00000612355 A0A0G2JLW4 131 aa13.87□□□□□ -0.19
PPARGC1A-216ENST00000612355 HTRA3P83110 453 aa13.87□□□□□ -0.19
PPARGC1A-216ENST00000612355 GGNBP2Q9H3C7 697 aa13.87□□□□□ -0.19
PPARGC1A-216ENST00000612355 SLC24A1O60721 1099 aa13.86□□□□□ -0.19
PPARGC1A-216ENST00000612355 ADRA2BP18089 450 aa13.86□□□□□ -0.19
PPARGC1A-216ENST00000612355 ARHGAP27Q6ZUM4 889 aa13.86□□□□□ -0.19
PPARGC1A-216ENST00000612355 NLGN1Q8N2Q7 840 aa13.86□□□□□ -0.19
PPARGC1A-216ENST00000612355 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.86□□□□□ -0.193e-12■□□□□ 8.9
PPARGC1A-216ENST00000612355 TMOD3Q9NYL9 352 aa13.86□□□□□ -0.19
PPARGC1A-216ENST00000612355 ASAP1Q9ULH1 1129 aa13.86□□□□□ -0.19
PPARGC1A-216ENST00000612355 DPEP1P16444 411 aa13.85□□□□□ -0.19
PPARGC1A-216ENST00000612355 ATP6V1AP38606 617 aa13.85□□□□□ -0.19
PPARGC1A-216ENST00000612355 C9orf131Q5VYM1 1079 aa13.85□□□□□ -0.19
PPARGC1A-216ENST00000612355 TNS4Q8IZW8 715 aa13.85□□□□□ -0.19
PPARGC1A-216ENST00000612355 CCDC87Q9NVE4 849 aa13.85□□□□□ -0.19
PPARGC1A-216ENST00000612355 FCHSD2O94868 740 aa13.84□□□□□ -0.19
PPARGC1A-216ENST00000612355 KCNA3P22001 575 aa13.84□□□□□ -0.19
PPARGC1A-216ENST00000612355 TMF1P82094 1093 aa13.84□□□□□ -0.19
PPARGC1A-216ENST00000612355 C16orf71Q8IYS4 520 aaPredicted RBP13.84□□□□□ -0.19
PPARGC1A-216ENST00000612355 DCAF5Q96JK2 942 aa13.84□□□□□ -0.19
PPARGC1A-216ENST00000612355 SPG7Q9UQ90 795 aa13.84□□□□□ -0.19
PPARGC1A-216ENST00000612355 KDM2BQ8NHM5 1336 aa13.84□□□□□ -0.19
PPARGC1A-216ENST00000612355 ST20-MTHFSA0A0A6YYL1 179 aa13.83□□□□□ -0.2
PPARGC1A-216ENST00000612355 GYS1P13807 737 aa13.83□□□□□ -0.2
PPARGC1A-216ENST00000612355 TRAPPC3LQ5T215 181 aa13.83□□□□□ -0.2
PPARGC1A-216ENST00000612355 ATG3Q9NT62 314 aa13.83□□□□□ -0.2
PPARGC1A-216ENST00000612355 RTCBQ9Y3I0 505 aaKnown RBP13.83□□□□□ -0.2
PPARGC1A-216ENST00000612355 CNTNAP4Q9C0A0 1308 aa13.83□□□□□ -0.2
PPARGC1A-216ENST00000612355 CAPN15O75808 1086 aa13.82□□□□□ -0.2
PPARGC1A-216ENST00000612355 PHKG2P15735 406 aa13.82□□□□□ -0.2
PPARGC1A-216ENST00000612355 RC3H1Q5TC82 1133 aaKnown RBP13.82□□□□□ -0.2
PPARGC1A-216ENST00000612355 EMILIN1Q9Y6C2 1016 aa13.82□□□□□ -0.2
PPARGC1A-216ENST00000612355 ZC3H4Q9UPT8 1303 aaKnown RBP13.82□□□□□ -0.2
PPARGC1A-216ENST00000612355 ADAMTS7Q9UKP4 1686 aa13.82□□□□□ -0.2
PPARGC1A-216ENST00000612355 KDM6AO15550 1401 aaPredicted RBP13.81□□□□□ -0.2
PPARGC1A-216ENST00000612355 DLEC1Q9Y238 1755 aa13.81□□□□□ -0.2
PPARGC1A-216ENST00000612355 SMC1BQ8NDV3 1235 aa13.81□□□□□ -0.2
PPARGC1A-216ENST00000612355 ARHGEF1Q92888 912 aaKnown RBP13.81□□□□□ -0.2
PPARGC1A-216ENST00000612355 SLC4A9Q96Q91 983 aa13.81□□□□□ -0.2
PPARGC1A-216ENST00000612355 IFNL2Q8IZJ0 200 aa13.8□□□□□ -0.2
PPARGC1A-216ENST00000612355 PIM2Q9P1W9 311 aa13.8□□□□□ -0.2
PPARGC1A-216ENST00000612355 PARP3Q9Y6F1 533 aa13.8□□□□□ -0.2
PPARGC1A-216ENST00000612355 TIAM2Q8IVF5 1701 aa13.8□□□□□ -0.2
PPARGC1A-216ENST00000612355 TJP1Q07157 1748 aa13.79□□□□□ -0.2
PPARGC1A-216ENST00000612355 RPS6KA4O75676 772 aa13.79□□□□□ -0.2
PPARGC1A-216ENST00000612355 RNF181Q9P0P0 153 aa13.79□□□□□ -0.2
PPARGC1A-216ENST00000612355 WASHC2AQ641Q2 1341 aa13.79□□□□□ -0.2
PPARGC1A-216ENST00000612355 CCDC88AQ3V6T2 1871 aa13.78□□□□□ -0.2
PPARGC1A-216ENST00000612355 DALRD3Q5D0E6 543 aaKnown RBP13.78□□□□□ -0.2
PPARGC1A-216ENST00000612355 EYA1Q99502 592 aa13.78□□□□□ -0.2
PPARGC1A-216ENST00000612355 RRAGCQ9HB90 399 aa13.78□□□□□ -0.2
PPARGC1A-216ENST00000612355 NRXN2Q9P2S2 1712 aa13.78□□□□□ -0.2
PPARGC1A-216ENST00000612355 RFC4P35249 363 aa13.77□□□□□ -0.21
PPARGC1A-216ENST00000612355 AFDNP55196 1824 aaKnown RBP13.77□□□□□ -0.21
PPARGC1A-216ENST00000612355 ERVV-2B6SEH9 535 aa13.76□□□□□ -0.21
PPARGC1A-216ENST00000612355 HSPA1AP0DMV8 641 aaKnown RBP13.76□□□□□ -0.21
PPARGC1A-216ENST00000612355 HSPA1BP0DMV9 641 aaKnown RBP13.76□□□□□ -0.21
PPARGC1A-216ENST00000612355 USP42Q9H9J4 1324 aaKnown RBP13.75□□□□□ -0.21
PPARGC1A-216ENST00000612355 DDR1Q08345 913 aa13.75□□□□□ -0.21
PPARGC1A-216ENST00000612355 DICER1Q9UPY3 1922 aaKnown RBP13.74□□□□□ -0.21
PPARGC1A-216ENST00000612355 FKBP8Q14318 412 aa13.73□□□□□ -0.21
PPARGC1A-216ENST00000612355 RBM42Q9BTD8 480 aaKnown RBP13.73□□□□□ -0.21
PPARGC1A-216ENST00000612355 CARD14Q9BXL6 1004 aa13.73□□□□□ -0.21
PPARGC1A-216ENST00000612355 GLTPD2A6NH11 291 aa13.72□□□□□ -0.21
PPARGC1A-216ENST00000612355 POLRMTO00411 1230 aaKnown RBP13.72□□□□□ -0.21
PPARGC1A-216ENST00000612355 HSP90AB1P08238 724 aaKnown RBP13.72□□□□□ -0.21
PPARGC1A-216ENST00000612355 VEGFAP15692 232 aaPredicted RBP13.72□□□□□ -0.21
PPARGC1A-216ENST00000612355 CHRNA5P30532 468 aa13.72□□□□□ -0.21
PPARGC1A-216ENST00000612355 SCN11AQ9UI33 1791 aa13.72□□□□□ -0.21
PPARGC1A-216ENST00000612355 PPM1GO15355 546 aaPredicted RBP13.71□□□□□ -0.21
PPARGC1A-216ENST00000612355 CRKLP46109 303 aaKnown RBP13.71□□□□□ -0.21
PPARGC1A-216ENST00000612355 CDCA8Q53HL2 280 aa13.71□□□□□ -0.21
PPARGC1A-216ENST00000612355 POLKQ9UBT6 870 aa13.71□□□□□ -0.21
PPARGC1A-216ENST00000612355 SRP68Q9UHB9 627 aaKnown RBP13.71□□□□□ -0.21
PPARGC1A-216ENST00000612355 LMNB1P20700 586 aa13.7□□□□□ -0.22
PPARGC1A-216ENST00000612355 TM4SF1P30408 202 aa13.7□□□□□ -0.22
PPARGC1A-216ENST00000612355 RASSF7Q02833 373 aa13.7□□□□□ -0.22
PPARGC1A-216ENST00000612355 EIF4A2Q14240 407 aaKnown RBP13.7□□□□□ -0.22
PPARGC1A-216ENST00000612355 FER1L6Q2WGJ9 1857 aa13.7□□□□□ -0.22
PPARGC1A-216ENST00000612355 VIRMAQ69YN4 1812 aaKnown RBP13.68□□□□□ -0.22
PPARGC1A-216ENST00000612355 POTECB2RU33 542 aa13.67□□□□□ -0.22
PPARGC1A-216ENST00000612355 CABP4P57796 275 aa13.67□□□□□ -0.22
PPARGC1A-216ENST00000612355 ANKRD31Q8N7Z5 1873 aa13.67□□□□□ -0.22
PPARGC1A-216ENST00000612355 PTCD1O75127 700 aaKnown RBP13.66□□□□□ -0.22
PPARGC1A-216ENST00000612355 SLC34A2O95436 690 aa13.66□□□□□ -0.22
PPARGC1A-216ENST00000612355 AMOTQ4VCS5 1084 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms