RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 PHF14O94880 888 aa10.47□□□□□ -0.73
PTCHD3P1-201ENST00000612350 DPEP1P16444 411 aa10.47□□□□□ -0.73
PTCHD3P1-201ENST00000612350 NBPF1Q3BBV0 1214 aa10.47□□□□□ -0.73
PTCHD3P1-201ENST00000612350 ZCRB1Q8TBF4 217 aaKnown RBP10.47□□□□□ -0.73
PTCHD3P1-201ENST00000612350 ABHD8Q96I13 439 aa10.47□□□□□ -0.73
PTCHD3P1-201ENST00000612350 CENPJQ9HC77 1338 aaPredicted RBP10.47□□□□□ -0.73
PTCHD3P1-201ENST00000612350 USP31Q70CQ4 1352 aa10.47□□□□□ -0.73
PTCHD3P1-201ENST00000612350 ARFGEF1Q9Y6D6 1849 aa10.47□□□□□ -0.73
PTCHD3P1-201ENST00000612350 SBF1O95248 1867 aa10.47□□□□□ -0.73
PTCHD3P1-201ENST00000612350 KCNA3P22001 575 aa10.46□□□□□ -0.73
PTCHD3P1-201ENST00000612350 MLLT1Q03111 559 aaPredicted RBP10.46□□□□□ -0.73
PTCHD3P1-201ENST00000612350 AK7Q96M32 723 aa10.46□□□□□ -0.73
PTCHD3P1-201ENST00000612350 KIAA1210Q9ULL0 1709 aa10.46□□□□□ -0.74
PTCHD3P1-201ENST00000612350 PALLDQ8WX93 1383 aa10.45□□□□□ -0.74
PTCHD3P1-201ENST00000612350 MMP10P09238 476 aa10.45□□□□□ -0.74
PTCHD3P1-201ENST00000612350 SSFA2P28290 1259 aa10.45□□□□□ -0.74
PTCHD3P1-201ENST00000612350 RNF181Q9P0P0 153 aa10.45□□□□□ -0.74
PTCHD3P1-201ENST00000612350 VEGFAP15692 232 aaPredicted RBP10.44□□□□□ -0.74
PTCHD3P1-201ENST00000612350 CTCFP49711 727 aaPredicted RBP10.44□□□□□ -0.74
PTCHD3P1-201ENST00000612350 DCAF5Q96JK2 942 aa10.44□□□□□ -0.74
PTCHD3P1-201ENST00000612350 MKRN1Q9UHC7 482 aaKnown RBP10.44□□□□□ -0.74
PTCHD3P1-201ENST00000612350 IP6K1Q92551 441 aa10.43□□□□□ -0.74
PTCHD3P1-201ENST00000612350 FAM208AQ9UK61 1670 aaKnown RBP10.43□□□□□ -0.74
PTCHD3P1-201ENST00000612350 NSD3Q9BZ95 1437 aa10.42□□□□□ -0.74
PTCHD3P1-201ENST00000612350 NME9Q86XW9 330 aa10.42□□□□□ -0.74
PTCHD3P1-201ENST00000612350 LTV1Q96GA3 475 aaPredicted RBP10.42□□□□□ -0.74
PTCHD3P1-201ENST00000612350 CREBZFQ9NS37 354 aa10.42□□□□□ -0.74
PTCHD3P1-201ENST00000612350 MEGF6O75095 1541 aa10.42□□□□□ -0.74
PTCHD3P1-201ENST00000612350 KTN1Q86UP2 1357 aaKnown RBP10.41□□□□□ -0.74
PTCHD3P1-201ENST00000612350 GLTPD2A6NH11 291 aa10.41□□□□□ -0.74
PTCHD3P1-201ENST00000612350 SPDYE4A6NLX3 237 aa10.41□□□□□ -0.74
PTCHD3P1-201ENST00000612350 POTECB2RU33 542 aa10.41□□□□□ -0.74
PTCHD3P1-201ENST00000612350 LBX1P52954 281 aa10.41□□□□□ -0.74
PTCHD3P1-201ENST00000612350 LINC00116Q8NCU8 138 aa10.41□□□□□ -0.74
PTCHD3P1-201ENST00000612350 MAP2P11137 1827 aaKnown RBP10.41□□□□□ -0.74
PTCHD3P1-201ENST00000612350 EVC2Q86UK5 1308 aa10.4□□□□□ -0.74
PTCHD3P1-201ENST00000612350 ZC3H4Q9UPT8 1303 aaKnown RBP10.4□□□□□ -0.74
PTCHD3P1-201ENST00000612350 RGPD2P0DJD1 1756 aa10.4□□□□□ -0.74
PTCHD3P1-201ENST00000612350 MPRIPQ6WCQ1 1025 aa10.4□□□□□ -0.74
PTCHD3P1-201ENST00000612350 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.4□□□□□ -0.74
PTCHD3P1-201ENST00000612350 SMARCC1Q92922 1105 aaPredicted RBP10.4□□□□□ -0.74
PTCHD3P1-201ENST00000612350 WBP1LQ9NX94 342 aa10.4□□□□□ -0.74
PTCHD3P1-201ENST00000612350 PIM2Q9P1W9 311 aa10.4□□□□□ -0.74
PTCHD3P1-201ENST00000612350 CNTNAP1P78357 1384 aa10.39□□□□□ -0.75
PTCHD3P1-201ENST00000612350 MON2Q7Z3U7 1717 aa10.39□□□□□ -0.75
PTCHD3P1-201ENST00000612350 NLGN1Q8N2Q7 840 aa10.39□□□□□ -0.75
PTCHD3P1-201ENST00000612350 CCDC87Q9NVE4 849 aa10.39□□□□□ -0.75
PTCHD3P1-201ENST00000612350 KDM6AO15550 1401 aaPredicted RBP10.39□□□□□ -0.75
PTCHD3P1-201ENST00000612350 ITGB4P16144 1822 aa10.38□□□□□ -0.75
PTCHD3P1-201ENST00000612350 CCDC85CA6NKD9 419 aa10.38□□□□□ -0.75
PTCHD3P1-201ENST00000612350 GNPATO15228 680 aa10.38□□□□□ -0.75
PTCHD3P1-201ENST00000612350 HSPA8P11142 646 aaKnown RBP10.38□□□□□ -0.75
PTCHD3P1-201ENST00000612350 TMF1P82094 1093 aa10.38□□□□□ -0.75
PTCHD3P1-201ENST00000612350 DALRD3Q5D0E6 543 aaKnown RBP10.38□□□□□ -0.75
PTCHD3P1-201ENST00000612350 AIDAQ96BJ3 306 aa10.38□□□□□ -0.75
PTCHD3P1-201ENST00000612350 C4AP0C0L4 1744 aa10.38□□□□□ -0.75
PTCHD3P1-201ENST00000612350 SBNO2Q9Y2G9 1366 aa10.38□□□□□ -0.75
PTCHD3P1-201ENST00000612350 VIRMAQ69YN4 1812 aaKnown RBP10.37□□□□□ -0.75
PTCHD3P1-201ENST00000612350 LOC102724428A0A0B4J2F2 783 aa10.37□□□□□ -0.75
PTCHD3P1-201ENST00000612350 VEGFBP49765 207 aa10.37□□□□□ -0.75
PTCHD3P1-201ENST00000612350 SIK1P57059 783 aa10.37□□□□□ -0.75
PTCHD3P1-201ENST00000612350 ITPK1Q13572 414 aa10.37□□□□□ -0.75
PTCHD3P1-201ENST00000612350 PIGBQ92521 554 aa10.37□□□□□ -0.75
PTCHD3P1-201ENST00000612350 FARP1Q9Y4F1 1045 aaPredicted RBP10.37□□□□□ -0.75
PTCHD3P1-201ENST00000612350 CGNL1Q0VF96 1302 aa10.36□□□□□ -0.75
PTCHD3P1-201ENST00000612350 NBPF6Q5VWK0 638 aa10.36□□□□□ -0.75
PTCHD3P1-201ENST00000612350 NBPF4Q96M43 638 aa10.36□□□□□ -0.75
PTCHD3P1-201ENST00000612350 GYS1P13807 737 aa10.35□□□□□ -0.75
PTCHD3P1-201ENST00000612350 HOXC9P31274 260 aa10.35□□□□□ -0.75
PTCHD3P1-201ENST00000612350 RASSF7Q02833 373 aa10.35□□□□□ -0.75
PTCHD3P1-201ENST00000612350 TRAPPC3LQ5T215 181 aa10.35□□□□□ -0.75
PTCHD3P1-201ENST00000612350 CD163L1Q9NR16 1453 aa10.35□□□□□ -0.75
PTCHD3P1-201ENST00000612350 PDE4DIPQ5VU43 2346 aa10.34□□□□□ -0.75
PTCHD3P1-201ENST00000612350 CYP27B1O15528 508 aa10.34□□□□□ -0.75
PTCHD3P1-201ENST00000612350 CHRNA5P30532 468 aa10.34□□□□□ -0.75
PTCHD3P1-201ENST00000612350 PARP3Q9Y6F1 533 aa10.34□□□□□ -0.75
PTCHD3P1-201ENST00000612350 CCDC88AQ3V6T2 1871 aa10.34□□□□□ -0.75
PTCHD3P1-201ENST00000612350 MAP3K19Q56UN5 1328 aa10.33□□□□□ -0.76
PTCHD3P1-201ENST00000612350 PASKQ96RG2 1323 aa10.33□□□□□ -0.76
PTCHD3P1-201ENST00000612350 LMNB1P20700 586 aa10.33□□□□□ -0.76
PTCHD3P1-201ENST00000612350 ARHGEF1Q92888 912 aaKnown RBP10.33□□□□□ -0.76
PTCHD3P1-201ENST00000612350 PCDH11XQ9BZA7 1347 aa10.33□□□□□ -0.76
PTCHD3P1-201ENST00000612350 PCDH11YQ9BZA8 1340 aa10.33□□□□□ -0.76
PTCHD3P1-201ENST00000612350 GABBR2O75899 941 aa10.32□□□□□ -0.76
PTCHD3P1-201ENST00000612350 POTEIP0CG38 1075 aa10.32□□□□□ -0.76
PTCHD3P1-201ENST00000612350 POTEJP0CG39 1038 aa10.32□□□□□ -0.76
PTCHD3P1-201ENST00000612350 FBLN1P23142 703 aa10.32□□□□□ -0.76
PTCHD3P1-201ENST00000612350 ATP6V1AP38606 617 aa10.32□□□□□ -0.76
PTCHD3P1-201ENST00000612350 USHBP1Q8N6Y0 703 aa10.32□□□□□ -0.76
PTCHD3P1-201ENST00000612350 RAPGEF4Q8WZA2 1011 aa10.32□□□□□ -0.76
PTCHD3P1-201ENST00000612350 CD44P16070 742 aaKnown RBP10.31□□□□□ -0.76
PTCHD3P1-201ENST00000612350 TATP17735 454 aaPredicted RBP10.31□□□□□ -0.76
PTCHD3P1-201ENST00000612350 NKX1-1Q15270 411 aaPredicted RBP10.31□□□□□ -0.76
PTCHD3P1-201ENST00000612350 ASAP1Q9ULH1 1129 aa10.31□□□□□ -0.76
PTCHD3P1-201ENST00000612350 RTCBQ9Y3I0 505 aaKnown RBP10.31□□□□□ -0.76
PTCHD3P1-201ENST00000612350 AMPHP49418 695 aa10.3□□□□□ -0.76
PTCHD3P1-201ENST00000612350 TIAM2Q8IVF5 1701 aa10.3□□□□□ -0.76
PTCHD3P1-201ENST00000612350 RAB3GAP2Q9H2M9 1393 aa10.29□□□□□ -0.76
PTCHD3P1-201ENST00000612350 TMEM88BA6NKF7 163 aa10.29□□□□□ -0.76
PTCHD3P1-201ENST00000612350 DDR1Q08345 913 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms