RNA–Protein interactions for RNA: ENST00000612195.4

TVP23A-210, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TVP23A, Length 1,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-210ENST00000612195 HSPA5P11021 654 aaKnown RBP23.02■■□□□ 1.28
TVP23A-210ENST00000612195 EIF4G2P78344 907 aaKnown RBP eCLIP23.02■■□□□ 1.28
TVP23A-210ENST00000612195 IGSF1Q8N6C5 1336 aa23.02■■□□□ 1.28
TVP23A-210ENST00000612195 WWC3Q9ULE0 1092 aa23■■□□□ 1.27
TVP23A-210ENST00000612195 PLEKHG2Q9H7P9 1386 aa23■■□□□ 1.27
TVP23A-210ENST00000612195 ERVV-2B6SEH9 535 aa22.99■■□□□ 1.27
TVP23A-210ENST00000612195 SLC4A9Q96Q91 983 aa22.99■■□□□ 1.27
TVP23A-210ENST00000612195 ATP10DQ9P241 1426 aa22.99■■□□□ 1.27
TVP23A-210ENST00000612195 PLEKHO1Q53GL0 409 aaPredicted RBP22.98■■□□□ 1.27
TVP23A-210ENST00000612195 DCAF5Q96JK2 942 aa22.98■■□□□ 1.27
TVP23A-210ENST00000612195 RBM42Q9BTD8 480 aaKnown RBP22.97■■□□□ 1.27
TVP23A-210ENST00000612195 KDRP35968 1356 aa22.97■■□□□ 1.27
TVP23A-210ENST00000612195 HSP90AB1P08238 724 aaKnown RBP22.96■■□□□ 1.27
TVP23A-210ENST00000612195 ZNF530Q6P9A1 599 aaPredicted RBP22.96■■□□□ 1.27
TVP23A-210ENST00000612195 MMP10P09238 476 aa22.95■■□□□ 1.26
TVP23A-210ENST00000612195 TRAPPC3LQ5T215 181 aa22.95■■□□□ 1.26
TVP23A-210ENST00000612195 MORC1Q86VD1 984 aa22.95■■□□□ 1.26
TVP23A-210ENST00000612195 RTCBQ9Y3I0 505 aaKnown RBP22.95■■□□□ 1.26
TVP23A-210ENST00000612195 AMOTQ4VCS5 1084 aa22.94■■□□□ 1.26
TVP23A-210ENST00000612195 AEBP1Q8IUX7 1158 aa22.94■■□□□ 1.26
TVP23A-210ENST00000612195 KDM6AO15550 1401 aaPredicted RBP22.93■■□□□ 1.26
TVP23A-210ENST00000612195 CABP4P57796 275 aa22.93■■□□□ 1.26
TVP23A-210ENST00000612195 ADCY9O60503 1353 aa22.92■■□□□ 1.26
TVP23A-210ENST00000612195 RC3H1Q5TC82 1133 aaKnown RBP22.92■■□□□ 1.26
TVP23A-210ENST00000612195 GPBP1L1Q9HC44 474 aaPredicted RBP22.92■■□□□ 1.26
TVP23A-210ENST00000612195 ZNF831Q5JPB2 1677 aa22.92■■□□□ 1.26
TVP23A-210ENST00000612195 MTHFSP49914 203 aa22.91■■□□□ 1.26
TVP23A-210ENST00000612195 ZNF526Q8TF50 670 aaPredicted RBP22.91■■□□□ 1.26
TVP23A-210ENST00000612195 ARHGEF1Q92888 912 aaKnown RBP22.91■■□□□ 1.26
TVP23A-210ENST00000612195 NLGN1Q8N2Q7 840 aa22.9■■□□□ 1.26
TVP23A-210ENST00000612195 COL5A3P25940 1745 aaPredicted RBP22.9■■□□□ 1.26
TVP23A-210ENST00000612195 CNTNAP4Q9C0A0 1308 aa22.89■■□□□ 1.26
TVP23A-210ENST00000612195 SULT6B1Q6IMI4 303 aa22.89■■□□□ 1.25
TVP23A-210ENST00000612195 RPS6KA4O75676 772 aa22.88■■□□□ 1.25
TVP23A-210ENST00000612195 ADRA2BP18089 450 aa22.88■■□□□ 1.25
TVP23A-210ENST00000612195 C1orf141Q5JVX7 400 aa22.88■■□□□ 1.25
TVP23A-210ENST00000612195 NFATC2IPQ8NCF5 419 aa22.88■■□□□ 1.25
TVP23A-210ENST00000612195 KNSTRNQ9Y448 316 aa22.88■■□□□ 1.25
TVP23A-210ENST00000612195 MYH14Q7Z406 1995 aaKnown RBP22.88■■□□□ 1.25
TVP23A-210ENST00000612195 KIF13BQ9NQT8 1826 aa22.87■■□□□ 1.25
TVP23A-210ENST00000612195 CICQ96RK0 1608 aaPredicted RBP22.87■■□□□ 1.25
TVP23A-210ENST00000612195 PTCD1O75127 700 aaKnown RBP22.87■■□□□ 1.25
TVP23A-210ENST00000612195 RFC4P35249 363 aa22.87■■□□□ 1.25
TVP23A-210ENST00000612195 PXDNLA1KZ92 1463 aa22.86■■□□□ 1.25
TVP23A-210ENST00000612195 A0A0G2JLW4 131 aa22.86■■□□□ 1.25
TVP23A-210ENST00000612195 GYS1P13807 737 aa22.86■■□□□ 1.25
TVP23A-210ENST00000612195 IL13P35225 146 aa22.86■■□□□ 1.25
TVP23A-210ENST00000612195 CCER1Q8TC90 406 aaPredicted RBP22.86■■□□□ 1.25
TVP23A-210ENST00000612195 N4BP2Q86UW6 1770 aaPredicted RBP22.86■■□□□ 1.25
TVP23A-210ENST00000612195 KIAA1551Q9HCM1 1747 aa22.85■■□□□ 1.25
TVP23A-210ENST00000612195 TGFB2P61812 414 aa22.85■■□□□ 1.25
TVP23A-210ENST00000612195 C10orf71Q711Q0 1435 aa22.83■■□□□ 1.25
TVP23A-210ENST00000612195 CCDC87Q9NVE4 849 aa22.83■■□□□ 1.25
TVP23A-210ENST00000612195 BCS1LQ9Y276 419 aa22.83■■□□□ 1.25
TVP23A-210ENST00000612195 C4AP0C0L4 1744 aa22.82■■□□□ 1.24
TVP23A-210ENST00000612195 CRKLP46109 303 aaKnown RBP22.82■■□□□ 1.24
TVP23A-210ENST00000612195 AMER1Q5JTC6 1135 aaPredicted RBP22.82■■□□□ 1.24
TVP23A-210ENST00000612195 PARP3Q9Y6F1 533 aa22.82■■□□□ 1.24
TVP23A-210ENST00000612195 DPEP1P16444 411 aa22.81■■□□□ 1.24
TVP23A-210ENST00000612195 SRP68Q9UHB9 627 aaKnown RBP22.8■■□□□ 1.24
TVP23A-210ENST00000612195 SCN11AQ9UI33 1791 aa22.8■■□□□ 1.24
TVP23A-210ENST00000612195 TJP1Q07157 1748 aa22.78■■□□□ 1.24
TVP23A-210ENST00000612195 AKAP4Q5JQC9 854 aa22.78■■□□□ 1.24
TVP23A-210ENST00000612195 ARHGAP27Q6ZUM4 889 aa22.78■■□□□ 1.24
TVP23A-210ENST00000612195 FKBP8Q14318 412 aa22.77■■□□□ 1.24
TVP23A-210ENST00000612195 INTS5Q6P9B9 1019 aaKnown RBP22.77■■□□□ 1.24
TVP23A-210ENST00000612195 LGR6Q9HBX8 967 aa22.77■■□□□ 1.24
TVP23A-210ENST00000612195 KIF7Q2M1P5 1343 aa22.77■■□□□ 1.24
TVP23A-210ENST00000612195 USP42Q9H9J4 1324 aaKnown RBP22.77■■□□□ 1.24
TVP23A-210ENST00000612195 KIF3CO14782 793 aa22.76■■□□□ 1.23
TVP23A-210ENST00000612195 FCHSD2O94868 740 aa22.76■■□□□ 1.23
TVP23A-210ENST00000612195 HSPA6P17066 643 aa22.76■■□□□ 1.23
TVP23A-210ENST00000612195 KCNA3P22001 575 aa22.76■■□□□ 1.23
TVP23A-210ENST00000612195 BRCA1P38398 1863 aaKnown RBP22.75■■□□□ 1.23
TVP23A-210ENST00000612195 HMOX1P09601 288 aa22.75■■□□□ 1.23
TVP23A-210ENST00000612195 DDR1Q08345 913 aa22.75■■□□□ 1.23
TVP23A-210ENST00000612195 SLC52A2Q9HAB3 445 aa22.75■■□□□ 1.23
TVP23A-210ENST00000612195 DNAJC10Q8IXB1 793 aa22.74■■□□□ 1.23
TVP23A-210ENST00000612195 RNMTO43148 476 aaKnown RBP22.72■■□□□ 1.23
TVP23A-210ENST00000612195 SLC39A6Q13433 755 aa22.72■■□□□ 1.23
TVP23A-210ENST00000612195 PER1O15534 1290 aaPredicted RBP22.71■■□□□ 1.23
TVP23A-210ENST00000612195 PIM2Q9P1W9 311 aa22.71■■□□□ 1.23
TVP23A-210ENST00000612195 ADAMTS7Q9UKP4 1686 aa22.71■■□□□ 1.23
TVP23A-210ENST00000612195 TM4SF1P30408 202 aa22.7■■□□□ 1.22
TVP23A-210ENST00000612195 MTHFSDQ2M296 383 aaKnown RBP22.7■■□□□ 1.22
TVP23A-210ENST00000612195 VIRMAQ69YN4 1812 aaKnown RBP22.7■■□□□ 1.22
TVP23A-210ENST00000612195 ARFGEF1Q9Y6D6 1849 aa22.69■■□□□ 1.22
TVP23A-210ENST00000612195 SOS1Q07889 1333 aaPredicted RBP22.69■■□□□ 1.22
TVP23A-210ENST00000612195 DIAPH1O60610 1272 aaKnown RBP22.69■■□□□ 1.22
TVP23A-210ENST00000612195 ZPR1O75312 459 aa22.69■■□□□ 1.22
TVP23A-210ENST00000612195 CYP19A1P11511 503 aaPredicted RBP22.69■■□□□ 1.22
TVP23A-210ENST00000612195 CC2D1BQ5T0F9 858 aaKnown RBP22.69■■□□□ 1.22
TVP23A-210ENST00000612195 USPL1Q5W0Q7 1092 aa22.69■■□□□ 1.22
TVP23A-210ENST00000612195 MRC1P22897 1456 aa22.68■■□□□ 1.22
TVP23A-210ENST00000612195 POLRMTO00411 1230 aaKnown RBP22.68■■□□□ 1.22
TVP23A-210ENST00000612195 CHRNA5P30532 468 aa22.68■■□□□ 1.22
TVP23A-210ENST00000612195 DALRD3Q5D0E6 543 aaKnown RBP22.68■■□□□ 1.22
TVP23A-210ENST00000612195 C9orf131Q5VYM1 1079 aa22.67■■□□□ 1.22
TVP23A-210ENST00000612195 KCPQ6ZWJ8 1503 aa22.67■■□□□ 1.22
TVP23A-210ENST00000612195 NMRK2Q9NPI5 230 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms