RNA–Protein interactions for RNA: ENST00000612155.1

SRRM3-205, Transcript of serine/arginine repetitive matrix 3, humanhuman

TSL 1 (best)

Gene SRRM3, Length 2,150 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3-205ENST00000612155 MIS18AQ9NYP9 233 aa25.28■■□□□ 1.64
SRRM3-205ENST00000612155 VIRMAQ69YN4 1812 aaKnown RBP25.26■■□□□ 1.63
SRRM3-205ENST00000612155 BRWD3Q6RI45 1802 aa25.26■■□□□ 1.63
SRRM3-205ENST00000612155 LMOD3Q0VAK6 560 aa25.25■■□□□ 1.63
SRRM3-205ENST00000612155 ACSBG1Q96GR2 724 aa25.25■■□□□ 1.63
SRRM3-205ENST00000612155 RARSP54136 660 aaKnown RBP25.24■■□□□ 1.63
SRRM3-205ENST00000612155 DCAF5Q96JK2 942 aa25.24■■□□□ 1.63
SRRM3-205ENST00000612155 RGS12O14924 1447 aa25.23■■□□□ 1.63
SRRM3-205ENST00000612155 PLEKHG2Q9H7P9 1386 aa25.23■■□□□ 1.63
SRRM3-205ENST00000612155 TSR2Q969E8 191 aaKnown RBP25.22■■□□□ 1.63
SRRM3-205ENST00000612155 KDM2BQ8NHM5 1336 aa25.22■■□□□ 1.63
SRRM3-205ENST00000612155 SKAP1Q86WV1 359 aa25.22■■□□□ 1.63
SRRM3-205ENST00000612155 NFATC2IPQ8NCF5 419 aa25.22■■□□□ 1.63
SRRM3-205ENST00000612155 SYTL4Q96C24 671 aaPredicted RBP25.22■■□□□ 1.63
SRRM3-205ENST00000612155 CEMIPQ8WUJ3 1361 aa25.22■■□□□ 1.63
SRRM3-205ENST00000612155 HTATSF1O43719 755 aaKnown RBP25.21■■□□□ 1.63
SRRM3-205ENST00000612155 NKX1-1Q15270 411 aaPredicted RBP25.21■■□□□ 1.63
SRRM3-205ENST00000612155 TOGARAM1Q9Y4F4 1720 aa25.21■■□□□ 1.63
SRRM3-205ENST00000612155 SCN11AQ9UI33 1791 aa25.21■■□□□ 1.63
SRRM3-205ENST00000612155 TEFQ10587 303 aa25.2■■□□□ 1.62
SRRM3-205ENST00000612155 HSP90AB1P08238 724 aaKnown RBP25.2■■□□□ 1.62
SRRM3-205ENST00000612155 KRT27Q7Z3Y8 459 aa25.2■■□□□ 1.62
SRRM3-205ENST00000612155 FANCIQ9NVI1 1328 aa25.19■■□□□ 1.62
SRRM3-205ENST00000612155 PTF1AQ7RTS3 328 aa25.19■■□□□ 1.62
SRRM3-205ENST00000612155 KCNQ2O43526 872 aa25.18■■□□□ 1.62
SRRM3-205ENST00000612155 MYH16Q9H6N6 1097 aa25.18■■□□□ 1.62
SRRM3-205ENST00000612155 PRIM1P49642 420 aaKnown RBP25.18■■□□□ 1.62
SRRM3-205ENST00000612155 CABP4P57796 275 aa25.18■■□□□ 1.62
SRRM3-205ENST00000612155 SLC52A2Q9HAB3 445 aa25.17■■□□□ 1.62
SRRM3-205ENST00000612155 SLC39A6Q13433 755 aa25.17■■□□□ 1.62
SRRM3-205ENST00000612155 TNNQ9UQP3 1299 aa25.17■■□□□ 1.62
SRRM3-205ENST00000612155 DOT1LQ8TEK3 1739 aa25.17■■□□□ 1.62
SRRM3-205ENST00000612155 ADAMTS7Q9UKP4 1686 aa25.16■■□□□ 1.62
SRRM3-205ENST00000612155 MSH5O43196 834 aa25.16■■□□□ 1.62
SRRM3-205ENST00000612155 KCNQ3O43525 872 aa25.16■■□□□ 1.62
SRRM3-205ENST00000612155 PANK1Q8TE04 598 aa25.16■■□□□ 1.62
SRRM3-205ENST00000612155 PDE3AQ14432 1141 aa25.15■■□□□ 1.62
SRRM3-205ENST00000612155 MBIPQ9NS73 344 aa25.15■■□□□ 1.62
SRRM3-205ENST00000612155 TAF7Q15545 349 aaPredicted RBP25.15■■□□□ 1.62
SRRM3-205ENST00000612155 BCL2L13Q9BXK5 485 aa25.15■■□□□ 1.62
SRRM3-205ENST00000612155 BTBD11A6QL63 1104 aa25.14■■□□□ 1.61
SRRM3-205ENST00000612155 CFAP44Q96MT7 982 aa25.14■■□□□ 1.61
SRRM3-205ENST00000612155 TSPYL4Q9UJ04 414 aa25.14■■□□□ 1.61
SRRM3-205ENST00000612155 KRT24Q2M2I5 525 aa25.13■■□□□ 1.61
SRRM3-205ENST00000612155 PIGBQ92521 554 aa25.13■■□□□ 1.61
SRRM3-205ENST00000612155 ITGB4P16144 1822 aa25.13■■□□□ 1.61
SRRM3-205ENST00000612155 ZNF853P0CG23 659 aa25.12■■□□□ 1.61
SRRM3-205ENST00000612155 IFT57Q9NWB7 429 aa25.12■■□□□ 1.61
SRRM3-205ENST00000612155 ERVV-2B6SEH9 535 aa25.12■■□□□ 1.61
SRRM3-205ENST00000612155 EXOSC9Q06265 439 aaKnown RBP25.12■■□□□ 1.61
SRRM3-205ENST00000612155 FRAT1Q92837 279 aaPredicted RBP25.12■■□□□ 1.61
SRRM3-205ENST00000612155 TMOD3Q9NYL9 352 aa25.12■■□□□ 1.61
SRRM3-205ENST00000612155 IL16Q14005 1332 aa25.12■■□□□ 1.61
SRRM3-205ENST00000612155 CHL1O00533 1208 aa25.11■■□□□ 1.61
SRRM3-205ENST00000612155 TCERG1O14776 1098 aaKnown RBP25.11■■□□□ 1.61
SRRM3-205ENST00000612155 RLBP1P12271 317 aa25.11■■□□□ 1.61
SRRM3-205ENST00000612155 GNAI1P63096 354 aa25.11■■□□□ 1.61
SRRM3-205ENST00000612155 CALD1Q05682 793 aaKnown RBP25.11■■□□□ 1.61
SRRM3-205ENST00000612155 SIPA1L3O60292 1781 aaPredicted RBP25.1■■□□□ 1.61
SRRM3-205ENST00000612155 COG6Q9Y2V7 657 aa25.1■■□□□ 1.61
SRRM3-205ENST00000612155 ELL2O00472 640 aaPredicted RBP25.1■■□□□ 1.61
SRRM3-205ENST00000612155 ASAP1Q9ULH1 1129 aa25.09■■□□□ 1.61
SRRM3-205ENST00000612155 MRC1P22897 1456 aa25.09■■□□□ 1.61
SRRM3-205ENST00000612155 CENPQQ7L2Z9 268 aaPredicted RBP25.08■■□□□ 1.61
SRRM3-205ENST00000612155 CANXP27824 592 aaKnown RBP25.07■■□□□ 1.6
SRRM3-205ENST00000612155 BCL9O00512 1426 aa25.06■■□□□ 1.6
SRRM3-205ENST00000612155 TRIM37O94972 964 aa25.05■■□□□ 1.6
SRRM3-205ENST00000612155 TSPYL6Q8N831 410 aa25.05■■□□□ 1.6
SRRM3-205ENST00000612155 PTCD1O75127 700 aaKnown RBP25.05■■□□□ 1.6
SRRM3-205ENST00000612155 ZNF790Q6PG37 636 aa25.05■■□□□ 1.6
SRRM3-205ENST00000612155 FAM196AQ6ZSG2 479 aa25.04■■□□□ 1.6
SRRM3-205ENST00000612155 C8orf58Q8NAV2 365 aa25.04■■□□□ 1.6
SRRM3-205ENST00000612155 SBF2Q86WG5 1849 aa25.04■■□□□ 1.6
SRRM3-205ENST00000612155 IGHDP01880 384 aa25.04■■□□□ 1.6
SRRM3-205ENST00000612155 CT47B1P0C2W7 299 aaPredicted RBP25.04■■□□□ 1.6
SRRM3-205ENST00000612155 PRAMEF22A3QJZ6 481 aa25.03■■□□□ 1.6
SRRM3-205ENST00000612155 ATG3Q9NT62 314 aa25.03■■□□□ 1.6
SRRM3-205ENST00000612155 MS4A1P11836 297 aa25.03■■□□□ 1.6
SRRM3-205ENST00000612155 KDM3BQ7LBC6 1761 aa25.02■■□□□ 1.6
SRRM3-205ENST00000612155 SSH1Q8WYL5 1049 aa25.02■■□□□ 1.6
SRRM3-205ENST00000612155 ZNF496Q96IT1 587 aaPredicted RBP25.02■■□□□ 1.6
SRRM3-205ENST00000612155 PDE4AP27815 886 aa25.01■■□□□ 1.59
SRRM3-205ENST00000612155 TTC5Q8N0Z6 440 aa25.01■■□□□ 1.59
SRRM3-205ENST00000612155 EIF4A1P60842 406 aaKnown RBP25.01■■□□□ 1.59
SRRM3-205ENST00000612155 CLUAP1Q96AJ1 413 aa25.01■■□□□ 1.59
SRRM3-205ENST00000612155 PRKCSHP14314 528 aaPredicted RBP25■■□□□ 1.59
SRRM3-205ENST00000612155 RBM42Q9BTD8 480 aaKnown RBP25■■□□□ 1.59
SRRM3-205ENST00000612155 NECTIN2Q92692 538 aa24.99■■□□□ 1.59
SRRM3-205ENST00000612155 NHSQ6T4R5 1651 aa24.99■■□□□ 1.59
SRRM3-205ENST00000612155 KCNQ4P56696 695 aa24.98■■□□□ 1.59
SRRM3-205ENST00000612155 BACH2Q9BYV9 841 aa24.98■■□□□ 1.59
SRRM3-205ENST00000612155 BTAF1O14981 1849 aa24.98■■□□□ 1.59
SRRM3-205ENST00000612155 SMC4Q9NTJ3 1288 aa24.97■■□□□ 1.59
SRRM3-205ENST00000612155 PAPPAQ13219 1627 aa24.96■■□□□ 1.59
SRRM3-205ENST00000612155 BABAM1Q9NWV8 329 aa24.96■■□□□ 1.59
SRRM3-205ENST00000612155 TWISTNBQ3B726 338 aaPredicted RBP24.95■■□□□ 1.59
SRRM3-205ENST00000612155 ZKSCAN2Q63HK3 967 aa24.95■■□□□ 1.59
SRRM3-205ENST00000612155 SLC4A9Q96Q91 983 aa24.95■■□□□ 1.59
SRRM3-205ENST00000612155 BCL11BQ9C0K0 894 aaPredicted RBP24.95■■□□□ 1.59
SRRM3-205ENST00000612155 PCDHB15Q9Y5E8 787 aa24.95■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms