RNA–Protein interactions for RNA: ENST00000612040.2

FAM238B-204, Transcript of family with sequence similarity 238 member B, humanhuman

BASIC

Gene FAM238B, Length 423 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM238B-204ENST00000612040 LINC00116Q8NCU8 138 aa11.91□□□□□ -0.5
FAM238B-204ENST00000612040 SLC4A9Q96Q91 983 aa11.91□□□□□ -0.5
FAM238B-204ENST00000612040 TOGARAM1Q9Y4F4 1720 aa11.91□□□□□ -0.5
FAM238B-204ENST00000612040 DCTN1Q14203 1278 aa11.9□□□□□ -0.5
FAM238B-204ENST00000612040 AMIGO3Q86WK7 504 aa11.9□□□□□ -0.5
FAM238B-204ENST00000612040 COL23A1Q86Y22 540 aaPredicted RBP11.9□□□□□ -0.5
FAM238B-204ENST00000612040 GAS2L2Q8NHY3 880 aa11.9□□□□□ -0.5
FAM238B-204ENST00000612040 SLC52A2Q9HAB3 445 aa11.9□□□□□ -0.5
FAM238B-204ENST00000612040 PRKRIP1Q9H875 184 aaPredicted RBP11.89□□□□□ -0.51
FAM238B-204ENST00000612040 PPP1R1BQ9UD71 204 aaPredicted RBP11.89□□□□□ -0.51
FAM238B-204ENST00000612040 PNPLA7Q6ZV29 1317 aa11.88□□□□□ -0.51
FAM238B-204ENST00000612040 MYBBP1AQ9BQG0 1328 aaKnown RBP11.88□□□□□ -0.51
FAM238B-204ENST00000612040 PHF14O94880 888 aa11.88□□□□□ -0.51
FAM238B-204ENST00000612040 MCM10Q7L590 875 aa11.88□□□□□ -0.51
FAM238B-204ENST00000612040 AK7Q96M32 723 aa11.88□□□□□ -0.51
FAM238B-204ENST00000612040 RGPD3A6NKT7 1758 aaPredicted RBP11.87□□□□□ -0.51
FAM238B-204ENST00000612040 RGPD4Q7Z3J3 1758 aa11.87□□□□□ -0.51
FAM238B-204ENST00000612040 TEFQ10587 303 aa11.87□□□□□ -0.51
FAM238B-204ENST00000612040 MSL1Q68DK7 614 aa11.87□□□□□ -0.51
FAM238B-204ENST00000612040 CCDC146Q8IYE0 955 aa11.87□□□□□ -0.51
FAM238B-204ENST00000612040 MIS18AQ9NYP9 233 aa11.87□□□□□ -0.51
FAM238B-204ENST00000612040 GNPATO15228 680 aa11.86□□□□□ -0.51
FAM238B-204ENST00000612040 KCNQ3O43525 872 aa11.86□□□□□ -0.51
FAM238B-204ENST00000612040 NEFMP07197 916 aa11.86□□□□□ -0.51
FAM238B-204ENST00000612040 PTGER2P43116 358 aa11.86□□□□□ -0.51
FAM238B-204ENST00000612040 CCDC184Q52MB2 194 aa11.86□□□□□ -0.51
FAM238B-204ENST00000612040 RTF1Q92541 710 aaKnown RBP11.86□□□□□ -0.51
FAM238B-204ENST00000612040 PLEKHF1Q96S99 279 aa11.86□□□□□ -0.51
FAM238B-204ENST00000612040 MTFR1LQ9H019 292 aa11.86□□□□□ -0.51
FAM238B-204ENST00000612040 MAP3K5Q99683 1374 aa11.86□□□□□ -0.51
FAM238B-204ENST00000612040 PLEKHG2Q9H7P9 1386 aa11.86□□□□□ -0.51
FAM238B-204ENST00000612040 LY75O60449 1722 aa11.86□□□□□ -0.51
FAM238B-204ENST00000612040 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.85□□□□□ -0.51
FAM238B-204ENST00000612040 DNAJC10Q8IXB1 793 aa11.85□□□□□ -0.51
FAM238B-204ENST00000612040 ADAMTS8Q9UP79 889 aa11.85□□□□□ -0.51
FAM238B-204ENST00000612040 BTBD11A6QL63 1104 aa11.84□□□□□ -0.51
FAM238B-204ENST00000612040 WDR43Q15061 677 aaKnown RBP eCLIP11.84□□□□□ -0.51
FAM238B-204ENST00000612040 NEUROD2Q15784 382 aa11.84□□□□□ -0.51
FAM238B-204ENST00000612040 NFE2L2Q16236 605 aa11.84□□□□□ -0.51
FAM238B-204ENST00000612040 THUMPD2Q9BTF0 503 aaKnown RBP11.84□□□□□ -0.51
FAM238B-204ENST00000612040 RRP7AQ9Y3A4 280 aaKnown RBP11.84□□□□□ -0.51
FAM238B-204ENST00000612040 SENP3-EIF4A1A0A087X0R7 540 aa11.83□□□□□ -0.52
FAM238B-204ENST00000612040 CRKLP46109 303 aaKnown RBP11.83□□□□□ -0.52
FAM238B-204ENST00000612040 KLHL34Q8N239 644 aa11.83□□□□□ -0.52
FAM238B-204ENST00000612040 SLC16A10Q8TF71 515 aa11.83□□□□□ -0.52
FAM238B-204ENST00000612040 PNNQ9H307 717 aaKnown RBP11.83□□□□□ -0.52
FAM238B-204ENST00000612040 MAPK8IP3Q9UPT6 1336 aa11.83□□□□□ -0.52
FAM238B-204ENST00000612040 RIPK4P57078 832 aa11.82□□□□□ -0.52
FAM238B-204ENST00000612040 TRAPPC3LQ5T215 181 aa11.82□□□□□ -0.52
FAM238B-204ENST00000612040 RC3H1Q5TC82 1133 aaKnown RBP11.82□□□□□ -0.52
FAM238B-204ENST00000612040 INTS5Q6P9B9 1019 aaKnown RBP11.82□□□□□ -0.52
FAM238B-204ENST00000612040 TTC5Q8N0Z6 440 aa11.82□□□□□ -0.52
FAM238B-204ENST00000612040 FLAD1Q8NFF5 587 aa11.82□□□□□ -0.52
FAM238B-204ENST00000612040 ARHGEF1Q92888 912 aaKnown RBP11.82□□□□□ -0.52
FAM238B-204ENST00000612040 ZNF496Q96IT1 587 aaPredicted RBP11.82□□□□□ -0.52
FAM238B-204ENST00000612040 ARXQ96QS3 562 aa11.82□□□□□ -0.52
FAM238B-204ENST00000612040 SGIP1Q9BQI5 828 aa11.82□□□□□ -0.52
FAM238B-204ENST00000612040 RTCBQ9Y3I0 505 aaKnown RBP11.82□□□□□ -0.52
FAM238B-204ENST00000612040 PAPPAQ13219 1627 aa11.82□□□□□ -0.52
FAM238B-204ENST00000612040 SCN11AQ9UI33 1791 aa11.82□□□□□ -0.52
FAM238B-204ENST00000612040 ANP32CO43423 234 aa11.81□□□□□ -0.52
FAM238B-204ENST00000612040 RPS6KA4O75676 772 aa11.81□□□□□ -0.52
FAM238B-204ENST00000612040 CYP19A1P11511 503 aaPredicted RBP11.81□□□□□ -0.52
FAM238B-204ENST00000612040 HMGB2P26583 209 aaKnown RBP11.81□□□□□ -0.52
FAM238B-204ENST00000612040 CANXP27824 592 aaKnown RBP11.81□□□□□ -0.52
FAM238B-204ENST00000612040 TAF7Q15545 349 aaPredicted RBP11.81□□□□□ -0.52
FAM238B-204ENST00000612040 ZNF790Q6PG37 636 aa11.81□□□□□ -0.52
FAM238B-204ENST00000612040 CASZ1Q86V15 1759 aa11.8□□□□□ -0.52
FAM238B-204ENST00000612040 HTATSF1O43719 755 aaKnown RBP11.8□□□□□ -0.52
FAM238B-204ENST00000612040 POLD1P28340 1107 aa11.8□□□□□ -0.52
FAM238B-204ENST00000612040 FHDC1Q9C0D6 1143 aaPredicted RBP11.8□□□□□ -0.52
FAM238B-204ENST00000612040 TAF1LQ8IZX4 1826 aa11.79□□□□□ -0.52
FAM238B-204ENST00000612040 C5P01031 1676 aa11.79□□□□□ -0.52
FAM238B-204ENST00000612040 PRAMEF22A3QJZ6 481 aa11.79□□□□□ -0.52
FAM238B-204ENST00000612040 A1BGP04217 495 aa11.79□□□□□ -0.52
FAM238B-204ENST00000612040 SSFA2P28290 1259 aa11.79□□□□□ -0.52
FAM238B-204ENST00000612040 RFC4P35249 363 aa11.79□□□□□ -0.52
FAM238B-204ENST00000612040 TMPOP42166 694 aaKnown RBP11.79□□□□□ -0.52
FAM238B-204ENST00000612040 RUNDC1Q96C34 613 aa11.79□□□□□ -0.52
FAM238B-204ENST00000612040 CCDC87Q9NVE4 849 aa11.79□□□□□ -0.52
FAM238B-204ENST00000612040 SRP68Q9UHB9 627 aaKnown RBP11.79□□□□□ -0.52
FAM238B-204ENST00000612040 C4BP0C0L5 1744 aa11.79□□□□□ -0.52
FAM238B-204ENST00000612040 CEMIPQ8WUJ3 1361 aa11.79□□□□□ -0.52
FAM238B-204ENST00000612040 PIP4K2AP48426 406 aaPredicted RBP11.78□□□□□ -0.52
FAM238B-204ENST00000612040 FMNL2Q96PY5 1086 aa11.78□□□□□ -0.52
FAM238B-204ENST00000612040 SYT17Q9BSW7 474 aa11.78□□□□□ -0.52
FAM238B-204ENST00000612040 USP16Q9Y5T5 823 aa11.78□□□□□ -0.52
FAM238B-204ENST00000612040 TUBGCP6Q96RT7 1819 aa11.78□□□□□ -0.52
FAM238B-204ENST00000612040 CNTNAP4Q9C0A0 1308 aa11.78□□□□□ -0.52
FAM238B-204ENST00000612040 STARD3NLO95772 234 aa11.77□□□□□ -0.53
FAM238B-204ENST00000612040 VSIG10Q8N0Z9 540 aa11.77□□□□□ -0.53
FAM238B-204ENST00000612040 ZNF330Q9Y3S2 320 aaPredicted RBP11.77□□□□□ -0.53
FAM238B-204ENST00000612040 LAS1LQ9Y4W2 734 aaKnown RBP11.77□□□□□ -0.53
FAM238B-204ENST00000612040 LRP5O75197 1615 aa11.77□□□□□ -0.53
FAM238B-204ENST00000612040 VIRMAQ69YN4 1812 aaKnown RBP11.76□□□□□ -0.53
FAM238B-204ENST00000612040 MYH14Q7Z406 1995 aaKnown RBP11.76□□□□□ -0.53
FAM238B-204ENST00000612040 APAF1O14727 1248 aa11.76□□□□□ -0.53
FAM238B-204ENST00000612040 MRS2Q9HD23 443 aa11.76□□□□□ -0.53
FAM238B-204ENST00000612040 ZBTB1Q9Y2K1 713 aa11.76□□□□□ -0.53
FAM238B-204ENST00000612040 MMP10P09238 476 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms