RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 KLHL34Q8N239 644 aa10.56□□□□□ -0.72
TARDBP-213ENST00000611963 USP35Q9P2H5 1018 aa10.56□□□□□ -0.72
TARDBP-213ENST00000611963 CSB-PGBD3P0DP91 1061 aa10.55□□□□□ -0.72
TARDBP-213ENST00000611963 IRX6P78412 446 aaPredicted RBP10.55□□□□□ -0.72
TARDBP-213ENST00000611963 DCTN1Q14203 1278 aa10.55□□□□□ -0.72
TARDBP-213ENST00000611963 MTHFSDQ2M296 383 aaKnown RBP10.55□□□□□ -0.72
TARDBP-213ENST00000611963 BARGINQ6ZT62 677 aa10.55□□□□□ -0.72
TARDBP-213ENST00000611963 DEFB132Q7Z7B7 95 aa10.55□□□□□ -0.72
TARDBP-213ENST00000611963 PHF12Q96QT6 1004 aa10.55□□□□□ -0.72
TARDBP-213ENST00000611963 RCAN3Q9UKA8 241 aa10.55□□□□□ -0.72
TARDBP-213ENST00000611963 NEFLP07196 543 aa10.54□□□□□ -0.72
TARDBP-213ENST00000611963 CRB1P82279 1406 aa10.54□□□□□ -0.72
TARDBP-213ENST00000611963 LMOD3Q0VAK6 560 aa10.54□□□□□ -0.72
TARDBP-213ENST00000611963 TSR2Q969E8 191 aaKnown RBP10.54□□□□□ -0.72
TARDBP-213ENST00000611963 NLRP2Q9NX02 1062 aa10.54□□□□□ -0.72
TARDBP-213ENST00000611963 NUBP1P53384 320 aa10.53□□□□□ -0.72
TARDBP-213ENST00000611963 GAS2L2Q8NHY3 880 aa10.53□□□□□ -0.72
TARDBP-213ENST00000611963 LAS1LQ9Y4W2 734 aaKnown RBP10.53□□□□□ -0.72
TARDBP-213ENST00000611963 IL16Q14005 1332 aa10.53□□□□□ -0.72
TARDBP-213ENST00000611963 FANCIQ9NVI1 1328 aa10.53□□□□□ -0.72
TARDBP-213ENST00000611963 LRRC37A3O60309 1634 aa10.52□□□□□ -0.73
TARDBP-213ENST00000611963 GABBR2O75899 941 aa10.52□□□□□ -0.73
TARDBP-213ENST00000611963 MCM10Q7L590 875 aa10.52□□□□□ -0.73
TARDBP-213ENST00000611963 MYH16Q9H6N6 1097 aa10.52□□□□□ -0.73
TARDBP-213ENST00000611963 THRAP3Q9Y2W1 955 aaKnown RBP10.52□□□□□ -0.73
TARDBP-213ENST00000611963 RNF123Q5XPI4 1314 aa10.52□□□□□ -0.73
TARDBP-213ENST00000611963 WDR17Q8IZU2 1322 aa10.52□□□□□ -0.73
TARDBP-213ENST00000611963 PARP4Q9UKK3 1724 aaKnown RBP10.51□□□□□ -0.73
TARDBP-213ENST00000611963 MEGF6O75095 1541 aa10.51□□□□□ -0.73
TARDBP-213ENST00000611963 MAP3K5Q99683 1374 aa10.51□□□□□ -0.73
TARDBP-213ENST00000611963 PKD1L3Q7Z443 1732 aa10.5□□□□□ -0.73
TARDBP-213ENST00000611963 TNS1Q9HBL0 1735 aaKnown RBP10.5□□□□□ -0.73
TARDBP-213ENST00000611963 RRP1P56182 461 aaKnown RBP10.5□□□□□ -0.73
TARDBP-213ENST00000611963 CALD1Q05682 793 aaKnown RBP10.5□□□□□ -0.73
TARDBP-213ENST00000611963 ZNF530Q6P9A1 599 aaPredicted RBP10.5□□□□□ -0.73
TARDBP-213ENST00000611963 TOM1L2Q6ZVM7 507 aa10.5□□□□□ -0.73
TARDBP-213ENST00000611963 GNAT3A8MTJ3 354 aa10.49□□□□□ -0.73
TARDBP-213ENST00000611963 EXOSC9Q06265 439 aaKnown RBP10.49□□□□□ -0.73
TARDBP-213ENST00000611963 PLEKHO1Q53GL0 409 aaPredicted RBP10.49□□□□□ -0.73
TARDBP-213ENST00000611963 RTF1Q92541 710 aaKnown RBP10.49□□□□□ -0.73
TARDBP-213ENST00000611963 IFT57Q9NWB7 429 aa10.49□□□□□ -0.73
TARDBP-213ENST00000611963 DISP2A7MBM2 1401 aa10.49□□□□□ -0.73
TARDBP-213ENST00000611963 KAT6BQ8WYB5 2073 aa10.48□□□□□ -0.73
TARDBP-213ENST00000611963 SCN11AQ9UI33 1791 aa10.48□□□□□ -0.73
TARDBP-213ENST00000611963 PLIN1O60240 522 aa10.48□□□□□ -0.73
TARDBP-213ENST00000611963 ZNF853P0CG23 659 aa10.48□□□□□ -0.73
TARDBP-213ENST00000611963 TATP17735 454 aaPredicted RBP10.48□□□□□ -0.73
TARDBP-213ENST00000611963 GNAI1P63096 354 aa10.48□□□□□ -0.73
TARDBP-213ENST00000611963 SF3B2Q13435 895 aaKnown RBP10.48□□□□□ -0.73
TARDBP-213ENST00000611963 FAM196AQ6ZSG2 479 aa10.48□□□□□ -0.73
TARDBP-213ENST00000611963 RAPGEF4Q8WZA2 1011 aa10.48□□□□□ -0.73
TARDBP-213ENST00000611963 CARD10Q9BWT7 1032 aa10.48□□□□□ -0.73
TARDBP-213ENST00000611963 MBIPQ9NS73 344 aa10.48□□□□□ -0.73
TARDBP-213ENST00000611963 WNK3Q9BYP7 1800 aa10.48□□□□□ -0.73
TARDBP-213ENST00000611963 SHANK3Q9BYB0 1731 aa10.47□□□□□ -0.73
TARDBP-213ENST00000611963 TRIM37O94972 964 aa10.47□□□□□ -0.73
TARDBP-213ENST00000611963 BAG6P46379 1132 aa10.47□□□□□ -0.73
TARDBP-213ENST00000611963 EN1Q05925 392 aaPredicted RBP10.47□□□□□ -0.73
TARDBP-213ENST00000611963 IL17REQ8NFR9 667 aa10.47□□□□□ -0.73
TARDBP-213ENST00000611963 CFAP44Q96MT7 982 aa10.47□□□□□ -0.73
TARDBP-213ENST00000611963 SIPA1L3O60292 1781 aaPredicted RBP10.47□□□□□ -0.73
TARDBP-213ENST00000611963 HTATSF1O43719 755 aaKnown RBP10.46□□□□□ -0.73
TARDBP-213ENST00000611963 BCAR3O75815 825 aa10.46□□□□□ -0.73
TARDBP-213ENST00000611963 AMOTQ4VCS5 1084 aa10.46□□□□□ -0.73
TARDBP-213ENST00000611963 AKAP4Q5JQC9 854 aa10.46□□□□□ -0.73
TARDBP-213ENST00000611963 C1orf141Q5JVX7 400 aa10.46□□□□□ -0.73
TARDBP-213ENST00000611963 ZNF579Q8NAF0 562 aaKnown RBP10.46□□□□□ -0.73
TARDBP-213ENST00000611963 MIS18AQ9NYP9 233 aa10.46□□□□□ -0.73
TARDBP-213ENST00000611963 ZBTB47Q9UFB7 747 aaPredicted RBP10.46□□□□□ -0.73
TARDBP-213ENST00000611963 OVOS2A0A0G2JMS6 1433 aa10.46□□□□□ -0.74
TARDBP-213ENST00000611963 SRCAPQ6ZRS2 3230 aa10.45□□□□□ -0.74
TARDBP-213ENST00000611963 ADAMTS7Q9UKP4 1686 aa10.45□□□□□ -0.74
TARDBP-213ENST00000611963 CHL1O00533 1208 aa10.45□□□□□ -0.74
TARDBP-213ENST00000611963 RARSP54136 660 aaKnown RBP10.45□□□□□ -0.74
TARDBP-213ENST00000611963 DDB1Q16531 1140 aa10.45□□□□□ -0.74
TARDBP-213ENST00000611963 MPRIPQ6WCQ1 1025 aa10.45□□□□□ -0.74
TARDBP-213ENST00000611963 TSPYL6Q8N831 410 aa10.45□□□□□ -0.74
TARDBP-213ENST00000611963 BCL2L13Q9BXK5 485 aa10.45□□□□□ -0.74
TARDBP-213ENST00000611963 LGR6Q9HBX8 967 aa10.45□□□□□ -0.74
TARDBP-213ENST00000611963 KDM3BQ7LBC6 1761 aa10.44□□□□□ -0.74
TARDBP-213ENST00000611963 CEMIPQ8WUJ3 1361 aa10.44□□□□□ -0.74
TARDBP-213ENST00000611963 RNMTO43148 476 aaKnown RBP10.44□□□□□ -0.74
TARDBP-213ENST00000611963 EZH2Q15910 746 aaKnown RBP10.44□□□□□ -0.74
TARDBP-213ENST00000611963 MARCH10Q8NA82 808 aaPredicted RBP10.44□□□□□ -0.74
TARDBP-213ENST00000611963 CAMKK2Q96RR4 588 aa10.44□□□□□ -0.74
TARDBP-213ENST00000611963 TSPYL4Q9UJ04 414 aa10.44□□□□□ -0.74
TARDBP-213ENST00000611963 ELL2O00472 640 aaPredicted RBP10.43□□□□□ -0.74
TARDBP-213ENST00000611963 GALR2O43603 387 aaPredicted RBP10.43□□□□□ -0.74
TARDBP-213ENST00000611963 APBA3O96018 575 aa10.43□□□□□ -0.74
TARDBP-213ENST00000611963 CT47B1P0C2W7 299 aaPredicted RBP10.43□□□□□ -0.74
TARDBP-213ENST00000611963 KRT24Q2M2I5 525 aa10.43□□□□□ -0.74
TARDBP-213ENST00000611963 DCAF8Q5TAQ9 597 aa10.43□□□□□ -0.74
TARDBP-213ENST00000611963 C20orf194Q5TEA3 1177 aa10.43□□□□□ -0.74
TARDBP-213ENST00000611963 PTF1AQ7RTS3 328 aa10.43□□□□□ -0.74
TARDBP-213ENST00000611963 C8orf58Q8NAV2 365 aa10.43□□□□□ -0.74
TARDBP-213ENST00000611963 CDCA7Q9BWT1 371 aaPredicted RBP10.43□□□□□ -0.74
TARDBP-213ENST00000611963 SPG7Q9UQ90 795 aa10.43□□□□□ -0.74
TARDBP-213ENST00000611963 BCL9O00512 1426 aa10.42□□□□□ -0.74
TARDBP-213ENST00000611963 KDM6AO15550 1401 aaPredicted RBP10.42□□□□□ -0.74
TARDBP-213ENST00000611963 TNS2Q63HR2 1409 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms