RNA–Protein interactions for RNA: ENST00000611917.1

FAM228B-207, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 3

Gene FAM228B, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-207ENST00000611917 LGR6Q9HBX8 967 aa16.65■□□□□ 0.26
FAM228B-207ENST00000611917 LRP5O75197 1615 aa16.64■□□□□ 0.25
FAM228B-207ENST00000611917 GNAT3A8MTJ3 354 aa16.64■□□□□ 0.25
FAM228B-207ENST00000611917 RC3H1Q5TC82 1133 aaKnown RBP16.64■□□□□ 0.25
FAM228B-207ENST00000611917 PTCD1O75127 700 aaKnown RBP16.63■□□□□ 0.25
FAM228B-207ENST00000611917 SLC52A2Q9HAB3 445 aa16.63■□□□□ 0.25
FAM228B-207ENST00000611917 TRAPPC3LQ5T215 181 aa16.62■□□□□ 0.25
FAM228B-207ENST00000611917 SGIP1Q9BQI5 828 aa16.62■□□□□ 0.25
FAM228B-207ENST00000611917 PKD1L3Q7Z443 1732 aa16.62■□□□□ 0.25
FAM228B-207ENST00000611917 DOT1LQ8TEK3 1739 aa16.62■□□□□ 0.25
FAM228B-207ENST00000611917 SHANK3Q9BYB0 1731 aa16.62■□□□□ 0.25
FAM228B-207ENST00000611917 SSFA2P28290 1259 aa16.61■□□□□ 0.25
FAM228B-207ENST00000611917 PRKAR2BP31323 418 aa16.61■□□□□ 0.25
FAM228B-207ENST00000611917 TEFQ10587 303 aa16.61■□□□□ 0.25
FAM228B-207ENST00000611917 ITPK1Q13572 414 aa16.61■□□□□ 0.25
FAM228B-207ENST00000611917 LINC00116Q8NCU8 138 aa16.61■□□□□ 0.25
FAM228B-207ENST00000611917 SYT17Q9BSW7 474 aa16.61■□□□□ 0.25
FAM228B-207ENST00000611917 RTCBQ9Y3I0 505 aaKnown RBP16.61■□□□□ 0.25
FAM228B-207ENST00000611917 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.6■□□□□ 0.25
FAM228B-207ENST00000611917 GNPATO15228 680 aa16.6■□□□□ 0.25
FAM228B-207ENST00000611917 RTF1Q92541 710 aaKnown RBP16.6■□□□□ 0.25
FAM228B-207ENST00000611917 FHDC1Q9C0D6 1143 aaPredicted RBP16.6■□□□□ 0.25
FAM228B-207ENST00000611917 PHF14O94880 888 aa16.59■□□□□ 0.25
FAM228B-207ENST00000611917 PHACTR3Q96KR7 559 aa16.59■□□□□ 0.25
FAM228B-207ENST00000611917 RSPH6AQ9H0K4 717 aa16.59■□□□□ 0.25
FAM228B-207ENST00000611917 RPS6KA4O75676 772 aa16.58■□□□□ 0.24
FAM228B-207ENST00000611917 TTC5Q8N0Z6 440 aa16.58■□□□□ 0.24
FAM228B-207ENST00000611917 KDM6AO15550 1401 aaPredicted RBP16.57■□□□□ 0.24
FAM228B-207ENST00000611917 HTATSF1O43719 755 aaKnown RBP16.57■□□□□ 0.24
FAM228B-207ENST00000611917 ADRA2BP18089 450 aa16.57■□□□□ 0.24
FAM228B-207ENST00000611917 RFC4P35249 363 aa16.57■□□□□ 0.24
FAM228B-207ENST00000611917 KLHL34Q8N239 644 aa16.57■□□□□ 0.24
FAM228B-207ENST00000611917 IL17REQ8NFR9 667 aa16.57■□□□□ 0.24
FAM228B-207ENST00000611917 SLC4A9Q96Q91 983 aa16.57■□□□□ 0.24
FAM228B-207ENST00000611917 SRCAPQ6ZRS2 3230 aa16.56■□□□□ 0.24
FAM228B-207ENST00000611917 SLC39A6Q13433 755 aa16.56■□□□□ 0.24
FAM228B-207ENST00000611917 VSIG10Q8N0Z9 540 aa16.56■□□□□ 0.24
FAM228B-207ENST00000611917 NLGN1Q8N2Q7 840 aa16.56■□□□□ 0.24
FAM228B-207ENST00000611917 TEX13AQ9BXU3 409 aaPredicted RBP16.56■□□□□ 0.24
FAM228B-207ENST00000611917 LY75O60449 1722 aa16.56■□□□□ 0.24
FAM228B-207ENST00000611917 MSL1Q68DK7 614 aa16.55■□□□□ 0.24
FAM228B-207ENST00000611917 MAP3K5Q99683 1374 aa16.54■□□□□ 0.24
FAM228B-207ENST00000611917 CNTNAP4Q9C0A0 1308 aa16.54■□□□□ 0.24
FAM228B-207ENST00000611917 STARD3NLO95772 234 aa16.54■□□□□ 0.24
FAM228B-207ENST00000611917 ARHGEF1Q92888 912 aaKnown RBP16.54■□□□□ 0.24
FAM228B-207ENST00000611917 PAPPAQ13219 1627 aa16.54■□□□□ 0.24
FAM228B-207ENST00000611917 BTBD11A6QL63 1104 aa16.53■□□□□ 0.24
FAM228B-207ENST00000611917 CRKLP46109 303 aaKnown RBP16.53■□□□□ 0.24
FAM228B-207ENST00000611917 ITGB4P16144 1822 aa16.53■□□□□ 0.24
FAM228B-207ENST00000611917 COL3A1P02461 1466 aaPredicted RBP16.53■□□□□ 0.24
FAM228B-207ENST00000611917 CASZ1Q86V15 1759 aa16.52■□□□□ 0.24
FAM228B-207ENST00000611917 GPR162Q16538 588 aa16.52■□□□□ 0.24
FAM228B-207ENST00000611917 ZNF790Q6PG37 636 aa16.52■□□□□ 0.24
FAM228B-207ENST00000611917 SMIM5Q71RC9 77 aa16.52■□□□□ 0.24
FAM228B-207ENST00000611917 DNAJC10Q8IXB1 793 aa16.52■□□□□ 0.24
FAM228B-207ENST00000611917 CD2APQ9Y5K6 639 aa16.52■□□□□ 0.24
FAM228B-207ENST00000611917 NPM2Q86SE8 214 aaKnown RBP16.51■□□□□ 0.23
FAM228B-207ENST00000611917 MYBBP1AQ9BQG0 1328 aaKnown RBP16.5■□□□□ 0.23
FAM228B-207ENST00000611917 ZPR1O75312 459 aa16.5■□□□□ 0.23
FAM228B-207ENST00000611917 TAF7Q15545 349 aaPredicted RBP16.5■□□□□ 0.23
FAM228B-207ENST00000611917 FMNL2Q96PY5 1086 aa16.5■□□□□ 0.23
FAM228B-207ENST00000611917 CCDC87Q9NVE4 849 aa16.5■□□□□ 0.23
FAM228B-207ENST00000611917 TOGARAM1Q9Y4F4 1720 aa16.5■□□□□ 0.23
FAM228B-207ENST00000611917 MAPK8IP3Q9UPT6 1336 aa16.49■□□□□ 0.23
FAM228B-207ENST00000611917 CYP19A1P11511 503 aaPredicted RBP16.49■□□□□ 0.23
FAM228B-207ENST00000611917 INTS5Q6P9B9 1019 aaKnown RBP16.49■□□□□ 0.23
FAM228B-207ENST00000611917 AMIGO3Q86WK7 504 aa16.49■□□□□ 0.23
FAM228B-207ENST00000611917 MCM10Q7L590 875 aa16.48■□□□□ 0.23
FAM228B-207ENST00000611917 PNISRQ8TF01 805 aaKnown RBP16.48■□□□□ 0.23
FAM228B-207ENST00000611917 A0A087WZG4 1122 aa16.47■□□□□ 0.23
FAM228B-207ENST00000611917 WDR43Q15061 677 aaKnown RBP eCLIP16.47■□□□□ 0.23
FAM228B-207ENST00000611917 NFE2L2Q16236 605 aa16.47■□□□□ 0.23
FAM228B-207ENST00000611917 PELP1Q8IZL8 1130 aaKnown RBP16.47■□□□□ 0.23
FAM228B-207ENST00000611917 ZNF496Q96IT1 587 aaPredicted RBP16.47■□□□□ 0.23
FAM228B-207ENST00000611917 PLEKHF1Q96S99 279 aa16.47■□□□□ 0.23
FAM228B-207ENST00000611917 PARP3Q9Y6F1 533 aa16.47■□□□□ 0.23
FAM228B-207ENST00000611917 C4BP0C0L5 1744 aa16.46■□□□□ 0.23
FAM228B-207ENST00000611917 ZNF316A6NFI3 1004 aaPredicted RBP16.46■□□□□ 0.23
FAM228B-207ENST00000611917 MMP10P09238 476 aa16.46■□□□□ 0.23
FAM228B-207ENST00000611917 CANXP27824 592 aaKnown RBP16.46■□□□□ 0.23
FAM228B-207ENST00000611917 PRKRIP1Q9H875 184 aaPredicted RBP16.46■□□□□ 0.23
FAM228B-207ENST00000611917 GRIN3BO60391 1043 aa16.45■□□□□ 0.22
FAM228B-207ENST00000611917 GYS1P13807 737 aa16.45■□□□□ 0.22
FAM228B-207ENST00000611917 YY1P25490 414 aa16.45■□□□□ 0.22
FAM228B-207ENST00000611917 CEMIPQ8WUJ3 1361 aa16.45■□□□□ 0.22
FAM228B-207ENST00000611917 C5P01031 1676 aa16.44■□□□□ 0.22
FAM228B-207ENST00000611917 SNRPA1P09661 255 aaKnown RBP16.44■□□□□ 0.22
FAM228B-207ENST00000611917 DCTN1Q14203 1278 aa16.44■□□□□ 0.22
FAM228B-207ENST00000611917 QSER1Q2KHR3 1735 aa16.44■□□□□ 0.22
FAM228B-207ENST00000611917 RIPK4P57078 832 aa16.43■□□□□ 0.22
FAM228B-207ENST00000611917 NARFQ9UHQ1 456 aa16.43■□□□□ 0.22
FAM228B-207ENST00000611917 HEG1Q9ULI3 1381 aa16.42■□□□□ 0.22
FAM228B-207ENST00000611917 KCNQ3O43525 872 aa16.42■□□□□ 0.22
FAM228B-207ENST00000611917 TGFB2P61812 414 aa16.42■□□□□ 0.22
FAM228B-207ENST00000611917 LMOD3Q0VAK6 560 aa16.42■□□□□ 0.22
FAM228B-207ENST00000611917 NLGN2Q8NFZ4 835 aa16.42■□□□□ 0.22
FAM228B-207ENST00000611917 USPL1Q5W0Q7 1092 aa16.41■□□□□ 0.22
FAM228B-207ENST00000611917 RUNDC1Q96C34 613 aa16.41■□□□□ 0.22
FAM228B-207ENST00000611917 SRP68Q9UHB9 627 aaKnown RBP16.41■□□□□ 0.22
FAM228B-207ENST00000611917 ZBTB1Q9Y2K1 713 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 333.9 ms