RNA–Protein interactions for RNA: ENST00000611575.4

CLK4-214, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CLK4, Length 1,206 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-214ENST00000611575 KCNV2Q8TDN2 545 aa10.28□□□□□ -0.76
CLK4-214ENST00000611575 MTFR1LQ9H019 292 aa10.28□□□□□ -0.76
CLK4-214ENST00000611575 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.28□□□□□ -0.76
CLK4-214ENST00000611575 TTC21AQ8NDW8 1320 aa10.28□□□□□ -0.76
CLK4-214ENST00000611575 SBNO2Q9Y2G9 1366 aa10.27□□□□□ -0.76
CLK4-214ENST00000611575 COL24A1Q17RW2 1714 aa10.27□□□□□ -0.76
CLK4-214ENST00000611575 FHDC1Q9C0D6 1143 aaPredicted RBP10.27□□□□□ -0.77
CLK4-214ENST00000611575 CD163L1Q9NR16 1453 aa10.27□□□□□ -0.77
CLK4-214ENST00000611575 ERBB3P21860 1342 aa10.26□□□□□ -0.77
CLK4-214ENST00000611575 AKAP12Q02952 1782 aa10.26□□□□□ -0.77
CLK4-214ENST00000611575 ST18O60284 1047 aa10.25□□□□□ -0.77
CLK4-214ENST00000611575 STK32BQ9NY57 414 aa10.25□□□□□ -0.77
CLK4-214ENST00000611575 EVC2Q86UK5 1308 aa10.25□□□□□ -0.77
CLK4-214ENST00000611575 EXOC5O00471 708 aa10.24□□□□□ -0.77
CLK4-214ENST00000611575 L3MBTL3Q96JM7 780 aaPredicted RBP10.24□□□□□ -0.77
CLK4-214ENST00000611575 ZNF827Q17R98 1081 aa10.23□□□□□ -0.77
CLK4-214ENST00000611575 LRRC4BQ9NT99 713 aa10.23□□□□□ -0.77
CLK4-214ENST00000611575 MON2Q7Z3U7 1717 aa10.23□□□□□ -0.77
CLK4-214ENST00000611575 C3orf67Q6ZVT6 689 aa10.22□□□□□ -0.77
CLK4-214ENST00000611575 L3MBTL2Q969R5 705 aa10.22□□□□□ -0.77
CLK4-214ENST00000611575 ARXQ96QS3 562 aa10.22□□□□□ -0.77
CLK4-214ENST00000611575 QSER1Q2KHR3 1735 aa10.21□□□□□ -0.77
CLK4-214ENST00000611575 RGPD5Q99666 1765 aa10.21□□□□□ -0.77
CLK4-214ENST00000611575 C1QTNF8P60827 252 aa10.21□□□□□ -0.77
CLK4-214ENST00000611575 NSD2O96028 1365 aa10.2□□□□□ -0.78
CLK4-214ENST00000611575 KTN1Q86UP2 1357 aaKnown RBP10.2□□□□□ -0.78
CLK4-214ENST00000611575 SLC16A10Q8TF71 515 aa10.2□□□□□ -0.78
CLK4-214ENST00000611575 CRISPLD2Q9H0B8 497 aa10.2□□□□□ -0.78
CLK4-214ENST00000611575 PNPLA7Q6ZV29 1317 aa10.19□□□□□ -0.78
CLK4-214ENST00000611575 ZBTB7CA1YPR0 619 aa10.19□□□□□ -0.78
CLK4-214ENST00000611575 IL2RBP14784 551 aa10.19□□□□□ -0.78
CLK4-214ENST00000611575 MFSD10Q14728 455 aa10.19□□□□□ -0.78
CLK4-214ENST00000611575 E2F4Q16254 413 aa10.19□□□□□ -0.78
CLK4-214ENST00000611575 SLC27A3Q5K4L6 730 aa10.19□□□□□ -0.78
CLK4-214ENST00000611575 PCDH10Q9P2E7 1040 aa10.19□□□□□ -0.78
CLK4-214ENST00000611575 BTAF1O14981 1849 aa10.19□□□□□ -0.78
CLK4-214ENST00000611575 EDC4Q6P2E9 1401 aaKnown RBP10.18□□□□□ -0.78
CLK4-214ENST00000611575 CSB-PGBD3P0DP91 1061 aa10.18□□□□□ -0.78
CLK4-214ENST00000611575 ARHGEF1Q92888 912 aaKnown RBP10.18□□□□□ -0.78
CLK4-214ENST00000611575 SHANK3Q9BYB0 1731 aa10.18□□□□□ -0.78
CLK4-214ENST00000611575 ROCK2O75116 1388 aaKnown RBP10.17□□□□□ -0.78
CLK4-214ENST00000611575 PDE4AP27815 886 aa10.17□□□□□ -0.78
CLK4-214ENST00000611575 NME9Q86XW9 330 aa10.17□□□□□ -0.78
CLK4-214ENST00000611575 ACSBG1Q96GR2 724 aa10.17□□□□□ -0.78
CLK4-214ENST00000611575 PUS7Q96PZ0 661 aaKnown RBP10.17□□□□□ -0.78
CLK4-214ENST00000611575 ANKRD36BQ8N2N9 1353 aa10.16□□□□□ -0.78
CLK4-214ENST00000611575 FAM208AQ9UK61 1670 aaKnown RBP10.16□□□□□ -0.78
CLK4-214ENST00000611575 ANKRD24Q8TF21 1146 aa10.16□□□□□ -0.78
CLK4-214ENST00000611575 BOLA1Q9Y3E2 137 aa10.16□□□□□ -0.78
CLK4-214ENST00000611575 IP6K1Q92551 441 aa10.15□□□□□ -0.78
CLK4-214ENST00000611575 LARP6Q9BRS8 491 aaKnown RBP10.15□□□□□ -0.78
CLK4-214ENST00000611575 CHD4Q14839 1912 aa10.15□□□□□ -0.79
CLK4-214ENST00000611575 A0A1W2PP64 1363 aa10.14□□□□□ -0.79
CLK4-214ENST00000611575 LY75O60449 1722 aa10.14□□□□□ -0.79
CLK4-214ENST00000611575 SENP3-EIF4A1A0A087X0R7 540 aa10.14□□□□□ -0.79
CLK4-214ENST00000611575 NLRP2Q9NX02 1062 aa10.14□□□□□ -0.79
CLK4-214ENST00000611575 LTN1O94822 1766 aa10.14□□□□□ -0.79
CLK4-214ENST00000611575 ADCY9O60503 1353 aa10.14□□□□□ -0.79
CLK4-214ENST00000611575 TUBGCP6Q96RT7 1819 aa10.13□□□□□ -0.79
CLK4-214ENST00000611575 SNPHO15079 494 aa10.13□□□□□ -0.79
CLK4-214ENST00000611575 CDAN1Q8IWY9 1227 aa10.13□□□□□ -0.79
CLK4-214ENST00000611575 NLGN2Q8NFZ4 835 aa10.13□□□□□ -0.79
CLK4-214ENST00000611575 MEGF6O75095 1541 aa10.12□□□□□ -0.79
CLK4-214ENST00000611575 YBX3P16989 372 aaKnown RBP eCLIP10.12□□□□□ -0.79
CLK4-214ENST00000611575 IFFO2Q5TF58 517 aa10.12□□□□□ -0.79
CLK4-214ENST00000611575 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.12□□□□□ -0.79
CLK4-214ENST00000611575 MARVELD3Q96A59 401 aa10.12□□□□□ -0.79
CLK4-214ENST00000611575 SIN3AQ96ST3 1273 aa10.12□□□□□ -0.79
CLK4-214ENST00000611575 SLC12A5Q9H2X9 1139 aa10.12□□□□□ -0.79
CLK4-214ENST00000611575 DDX27Q96GQ7 796 aaKnown RBP10.11□□□□□ -0.79
CLK4-214ENST00000611575 TESK2Q96S53 571 aa10.11□□□□□ -0.79
CLK4-214ENST00000611575 ARIH1Q9Y4X5 557 aaPredicted RBP10.11□□□□□ -0.79
CLK4-214ENST00000611575 MAP3K19Q56UN5 1328 aa10.1□□□□□ -0.79
CLK4-214ENST00000611575 G3V3G9 751 aa10.1□□□□□ -0.79
CLK4-214ENST00000611575 GIGYF1O75420 1035 aaPredicted RBP10.1□□□□□ -0.79
CLK4-214ENST00000611575 POLD1P28340 1107 aa10.1□□□□□ -0.79
CLK4-214ENST00000611575 HOXC9P31274 260 aa10.1□□□□□ -0.79
CLK4-214ENST00000611575 PRIM1P49642 420 aaKnown RBP10.1□□□□□ -0.79
CLK4-214ENST00000611575 CAMK2BQ13554 666 aa10.1□□□□□ -0.79
CLK4-214ENST00000611575 GPR162Q16538 588 aa10.1□□□□□ -0.79
CLK4-214ENST00000611575 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.1□□□□□ -0.79
CLK4-214ENST00000611575 RTL1A6NKG5 1358 aa10.1□□□□□ -0.79
CLK4-214ENST00000611575 DOT1LQ8TEK3 1739 aa10.1□□□□□ -0.79
CLK4-214ENST00000611575 NCAPD2Q15021 1401 aa10.09□□□□□ -0.79
CLK4-214ENST00000611575 KCNQ4P56696 695 aa10.09□□□□□ -0.79
CLK4-214ENST00000611575 HDGFL2Q7Z4V5 671 aaPredicted RBP10.09□□□□□ -0.79
CLK4-214ENST00000611575 COL23A1Q86Y22 540 aaPredicted RBP10.09□□□□□ -0.79
CLK4-214ENST00000611575 TMEM121BQ9BXQ6 578 aaPredicted RBP10.09□□□□□ -0.79
CLK4-214ENST00000611575 CGNL1Q0VF96 1302 aa10.08□□□□□ -0.8
CLK4-214ENST00000611575 GRIN3BO60391 1043 aa10.08□□□□□ -0.8
CLK4-214ENST00000611575 TERF2IPQ9NYB0 399 aa10.08□□□□□ -0.8
CLK4-214ENST00000611575 TFCP2L1Q9NZI6 479 aa10.08□□□□□ -0.8
CLK4-214ENST00000611575 ZCRB1Q8TBF4 217 aaKnown RBP10.07□□□□□ -0.8
CLK4-214ENST00000611575 DDX54Q8TDD1 881 aaKnown RBP10.07□□□□□ -0.8
CLK4-214ENST00000611575 GPHNQ9NQX3 736 aaPredicted RBP10.07□□□□□ -0.8
CLK4-214ENST00000611575 CCNL1Q9UK58 526 aaPredicted RBP10.07□□□□□ -0.8
CLK4-214ENST00000611575 CD2APQ9Y5K6 639 aa10.07□□□□□ -0.8
CLK4-214ENST00000611575 ATP10DQ9P241 1426 aa10.07□□□□□ -0.8
CLK4-214ENST00000611575 TESPA1A2RU30 521 aaPredicted RBP10.06□□□□□ -0.8
CLK4-214ENST00000611575 NBPF6Q5VWK0 638 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms