RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-223ENST00000611571 ANKRD44Q8N8A2 993 aa16.42■□□□□ 0.22
MUC1-223ENST00000611571 LIMCH1Q9UPQ0 1083 aa16.42■□□□□ 0.22
MUC1-223ENST00000611571 TRIM35Q9UPQ4 493 aa16.42■□□□□ 0.22
MUC1-223ENST00000611571 RAPGEF6Q8TEU7 1601 aa16.42■□□□□ 0.22
MUC1-223ENST00000611571 ZBTB7BO15156 539 aaPredicted RBP16.42■□□□□ 0.22
MUC1-223ENST00000611571 VPS53Q5VIR6 699 aa16.42■□□□□ 0.22
MUC1-223ENST00000611571 VPS37DQ86XT2 251 aa16.42■□□□□ 0.22
MUC1-223ENST00000611571 MAPK8IP2Q13387 824 aaPredicted RBP16.42■□□□□ 0.22
MUC1-223ENST00000611571 RAB11FIP4Q86YS3 637 aa16.42■□□□□ 0.22
MUC1-223ENST00000611571 NAT10Q9H0A0 1025 aaKnown RBP16.42■□□□□ 0.22
MUC1-223ENST00000611571 CNPY2Q9Y2B0 182 aa16.42■□□□□ 0.22
MUC1-223ENST00000611571 TSR1Q2NL82 804 aaKnown RBP16.41■□□□□ 0.22
MUC1-223ENST00000611571 C16orf45Q96MC5 204 aaPredicted RBP16.41■□□□□ 0.22
MUC1-223ENST00000611571 CCT2P78371 535 aaKnown RBP16.41■□□□□ 0.22
MUC1-223ENST00000611571 RAB3GAP1Q15042 981 aa16.41■□□□□ 0.22
MUC1-223ENST00000611571 LRRC2Q9BYS8 371 aa16.41■□□□□ 0.22
MUC1-223ENST00000611571 TRMT1Q9NXH9 659 aaKnown RBP16.41■□□□□ 0.22
MUC1-223ENST00000611571 SAFBQ15424 915 aaKnown RBP eCLIP16.41■□□□□ 0.22
MUC1-223ENST00000611571 DNAAF4Q8WXU2 420 aa16.41■□□□□ 0.22
MUC1-223ENST00000611571 STX6O43752 255 aa16.41■□□□□ 0.22
MUC1-223ENST00000611571 G2E3Q7L622 706 aa16.41■□□□□ 0.22
MUC1-223ENST00000611571 CCDC82Q8N4S0 544 aa16.41■□□□□ 0.22
MUC1-223ENST00000611571 FANCAO15360 1455 aa16.4■□□□□ 0.22
MUC1-223ENST00000611571 COL17A1Q9UMD9 1497 aaPredicted RBP16.4■□□□□ 0.22
MUC1-223ENST00000611571 GJB2P29033 226 aa16.4■□□□□ 0.22
MUC1-223ENST00000611571 ACEP12821 1306 aa16.4■□□□□ 0.22
MUC1-223ENST00000611571 HIP1O00291 1037 aa16.4■□□□□ 0.22
MUC1-223ENST00000611571 PIP4K2AP48426 406 aaPredicted RBP16.4■□□□□ 0.22
MUC1-223ENST00000611571 DHX16O60231 1041 aaKnown RBP16.4■□□□□ 0.22
MUC1-223ENST00000611571 TPM1P09493 284 aa16.4■□□□□ 0.22
MUC1-223ENST00000611571 CCDC183Q5T5S1 534 aa16.4■□□□□ 0.22
MUC1-223ENST00000611571 IL16Q14005 1332 aa16.39■□□□□ 0.22
MUC1-223ENST00000611571 SERPINC1P01008 464 aa16.39■□□□□ 0.21
MUC1-223ENST00000611571 PROSER2Q86WR7 435 aaPredicted RBP16.39■□□□□ 0.21
MUC1-223ENST00000611571 ANKRD36BQ8N2N9 1353 aa16.39■□□□□ 0.21
MUC1-223ENST00000611571 MTERF4Q7Z6M4 381 aaKnown RBP16.39■□□□□ 0.21
MUC1-223ENST00000611571 SPDYE4A6NLX3 237 aa16.39■□□□□ 0.21
MUC1-223ENST00000611571 USP48Q86UV5 1035 aa16.39■□□□□ 0.21
MUC1-223ENST00000611571 SNX21Q969T3 373 aa16.39■□□□□ 0.21
MUC1-223ENST00000611571 ZMYND15Q9H091 742 aa16.39■□□□□ 0.21
MUC1-223ENST00000611571 DCTPP1Q9H773 170 aa16.39■□□□□ 0.21
MUC1-223ENST00000611571 AMOTL2Q9Y2J4 779 aa16.39■□□□□ 0.21
MUC1-223ENST00000611571 PIK3C2GO75747 1445 aa16.39■□□□□ 0.21
MUC1-223ENST00000611571 ERICH2A1L162 156 aa16.38■□□□□ 0.21
MUC1-223ENST00000611571 ATP5J2-PTCD1G3V325 749 aa16.38■□□□□ 0.21
MUC1-223ENST00000611571 ATF3P18847 181 aa16.38■□□□□ 0.21
MUC1-223ENST00000611571 PPP6R1Q9UPN7 881 aa16.38■□□□□ 0.21
MUC1-223ENST00000611571 WDR62O43379 1518 aa16.38■□□□□ 0.21
MUC1-223ENST00000611571 EIF4A2Q14240 407 aaKnown RBP16.38■□□□□ 0.21
MUC1-223ENST00000611571 ISM2Q6H9L7 571 aa16.38■□□□□ 0.21
MUC1-223ENST00000611571 CEP85Q6P2H3 762 aa16.38■□□□□ 0.21
MUC1-223ENST00000611571 ARHGAP45Q92619 1136 aa16.38■□□□□ 0.21
MUC1-223ENST00000611571 OLFM4Q6UX06 510 aa16.38■□□□□ 0.21
MUC1-223ENST00000611571 MYD88Q99836 296 aa16.38■□□□□ 0.21
MUC1-223ENST00000611571 PA2G4Q9UQ80 394 aaKnown RBP16.38■□□□□ 0.21
MUC1-223ENST00000611571 ANKRD1Q15327 319 aa16.38■□□□□ 0.21
MUC1-223ENST00000611571 RHPN1Q8TCX5 695 aa16.38■□□□□ 0.21
MUC1-223ENST00000611571 ZSCAN31Q96LW9 406 aaPredicted RBP16.38■□□□□ 0.21
MUC1-223ENST00000611571 SNRKQ9NRH2 765 aa16.38■□□□□ 0.21
MUC1-223ENST00000611571 BIN1O00499 593 aa16.37■□□□□ 0.21
MUC1-223ENST00000611571 CABP4P57796 275 aa16.37■□□□□ 0.21
MUC1-223ENST00000611571 PDCL2Q8N4E4 241 aa16.37■□□□□ 0.21
MUC1-223ENST00000611571 PIBF1Q8WXW3 757 aa16.37■□□□□ 0.21
MUC1-223ENST00000611571 ESYT1Q9BSJ8 1104 aa16.37■□□□□ 0.21
MUC1-223ENST00000611571 KDM5BQ9UGL1 1544 aa16.37■□□□□ 0.21
MUC1-223ENST00000611571 A0A1W2PP64 1363 aa16.37■□□□□ 0.21
MUC1-223ENST00000611571 ZHX1Q9UKY1 873 aaPredicted RBP16.37■□□□□ 0.21
MUC1-223ENST00000611571 UHRF1BP1Q6BDS2 1440 aa16.37■□□□□ 0.21
MUC1-223ENST00000611571 TATP17735 454 aaPredicted RBP16.37■□□□□ 0.21
MUC1-223ENST00000611571 CNNM1Q9NRU3 951 aa16.36■□□□□ 0.21
MUC1-223ENST00000611571 ZBTB9Q96C00 473 aa16.36■□□□□ 0.21
MUC1-223ENST00000611571 ZNF396Q96N95 335 aaPredicted RBP16.36■□□□□ 0.21
MUC1-223ENST00000611571 LRSAM1Q6UWE0 723 aa16.36■□□□□ 0.21
MUC1-223ENST00000611571 USP26Q9BXU7 913 aa16.36■□□□□ 0.21
MUC1-223ENST00000611571 MAP3K2Q9Y2U5 619 aa16.36■□□□□ 0.21
MUC1-223ENST00000611571 PTPRCP08575 1304 aa16.35■□□□□ 0.21
MUC1-223ENST00000611571 DNM1Q05193 864 aaKnown RBP16.35■□□□□ 0.21
MUC1-223ENST00000611571 MTHFSDQ2M296 383 aaKnown RBP16.35■□□□□ 0.21
MUC1-223ENST00000611571 TTC39AQ5SRH9 613 aa16.35■□□□□ 0.21
MUC1-223ENST00000611571 ECHDC1Q9NTX5 307 aa16.35■□□□□ 0.21
MUC1-223ENST00000611571 PKP1Q13835 747 aa16.35■□□□□ 0.21
MUC1-223ENST00000611571 NCBP3Q53F19 620 aaKnown RBP16.35■□□□□ 0.21
MUC1-223ENST00000611571 RBSNQ9H1K0 784 aa16.35■□□□□ 0.21
MUC1-223ENST00000611571 NUP133Q8WUM0 1156 aa16.35■□□□□ 0.21
MUC1-223ENST00000611571 IDH1O75874 414 aaKnown RBP16.34■□□□□ 0.21
MUC1-223ENST00000611571 CEP126Q9P2H0 1117 aa16.34■□□□□ 0.21
MUC1-223ENST00000611571 CTTNBP2Q8WZ74 1663 aa16.34■□□□□ 0.21
MUC1-223ENST00000611571 ERICH4A6NGS2 130 aa16.34■□□□□ 0.21
MUC1-223ENST00000611571 IGSF3O75054 1194 aa16.34■□□□□ 0.21
MUC1-223ENST00000611571 CCDC158Q5M9N0 1113 aa16.34■□□□□ 0.21
MUC1-223ENST00000611571 CHPF2Q9P2E5 772 aa16.34■□□□□ 0.21
MUC1-223ENST00000611571 IPO7O95373 1038 aaKnown RBP16.34■□□□□ 0.21
MUC1-223ENST00000611571 HAND2P61296 217 aa16.34■□□□□ 0.21
MUC1-223ENST00000611571 FAM173BQ6P4H8 233 aa16.34■□□□□ 0.21
MUC1-223ENST00000611571 THEMISQ8N1K5 641 aaPredicted RBP16.34■□□□□ 0.21
MUC1-223ENST00000611571 CFAP45Q9UL16 551 aa16.34■□□□□ 0.21
MUC1-223ENST00000611571 TMX1Q9H3N1 280 aa16.33■□□□□ 0.21
MUC1-223ENST00000611571 HOOK1Q9UJC3 728 aaKnown RBP16.33■□□□□ 0.21
MUC1-223ENST00000611571 PHAXQ9H814 394 aaKnown RBP16.33■□□□□ 0.2
MUC1-223ENST00000611571 PLCH2O75038 1416 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms