RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 IL13P35225 146 aa29.52■■■□□ 2.32
CBWD3-207ENST00000611426 NLGN2Q8NFZ4 835 aa29.52■■■□□ 2.32
CBWD3-207ENST00000611426 ITPK1Q13572 414 aa29.51■■■□□ 2.31
CBWD3-207ENST00000611426 AMIGO3Q86WK7 504 aa29.51■■■□□ 2.31
CBWD3-207ENST00000611426 PELP1Q8IZL8 1130 aaKnown RBP29.51■■■□□ 2.31
CBWD3-207ENST00000611426 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.5■■■□□ 2.31
CBWD3-207ENST00000611426 SMIM5Q71RC9 77 aa29.5■■■□□ 2.31
CBWD3-207ENST00000611426 C1orf141Q5JVX7 400 aa29.49■■■□□ 2.31
CBWD3-207ENST00000611426 UBR3Q6ZT12 1888 aa29.48■■■□□ 2.31
CBWD3-207ENST00000611426 PER1O15534 1290 aaPredicted RBP29.48■■■□□ 2.31
CBWD3-207ENST00000611426 SSFA2P28290 1259 aa29.48■■■□□ 2.31
CBWD3-207ENST00000611426 MTHFSP49914 203 aa29.48■■■□□ 2.31
CBWD3-207ENST00000611426 CABP4P57796 275 aa29.48■■■□□ 2.31
CBWD3-207ENST00000611426 GOLGB1Q14789 3259 aaKnown RBP29.48■■■□□ 2.31
CBWD3-207ENST00000611426 CHD4Q14839 1912 aa29.47■■■□□ 2.31
CBWD3-207ENST00000611426 GNPATO15228 680 aa29.46■■■□□ 2.31
CBWD3-207ENST00000611426 CC2D1BQ5T0F9 858 aaKnown RBP29.46■■■□□ 2.31
CBWD3-207ENST00000611426 RBM42Q9BTD8 480 aaKnown RBP29.46■■■□□ 2.31
CBWD3-207ENST00000611426 KDRP35968 1356 aa29.45■■■□□ 2.3
CBWD3-207ENST00000611426 KDM6AO15550 1401 aaPredicted RBP29.44■■■□□ 2.3
CBWD3-207ENST00000611426 ZNF784Q8NCA9 323 aaPredicted RBP29.42■■■□□ 2.3
CBWD3-207ENST00000611426 CD2APQ9Y5K6 639 aa29.42■■■□□ 2.3
CBWD3-207ENST00000611426 SLC4A9Q96Q91 983 aa29.41■■■□□ 2.3
CBWD3-207ENST00000611426 NFATC2IPQ8NCF5 419 aa29.39■■■□□ 2.3
CBWD3-207ENST00000611426 CNGB1Q14028 1251 aaPredicted RBP29.38■■■□□ 2.29
CBWD3-207ENST00000611426 RTCBQ9Y3I0 505 aaKnown RBP29.38■■■□□ 2.29
CBWD3-207ENST00000611426 DIAPH1O60610 1272 aaKnown RBP29.37■■■□□ 2.29
CBWD3-207ENST00000611426 HMOX1P09601 288 aa29.37■■■□□ 2.29
CBWD3-207ENST00000611426 TRAPPC3LQ5T215 181 aa29.37■■■□□ 2.29
CBWD3-207ENST00000611426 GRIN3BO60391 1043 aa29.36■■■□□ 2.29
CBWD3-207ENST00000611426 YBX3P16989 372 aaKnown RBP eCLIP29.36■■■□□ 2.29
CBWD3-207ENST00000611426 AKAP4Q5JQC9 854 aa29.36■■■□□ 2.29
CBWD3-207ENST00000611426 DIEXFQ68CQ4 756 aaKnown RBP29.36■■■□□ 2.29
CBWD3-207ENST00000611426 ZNF831Q5JPB2 1677 aa29.36■■■□□ 2.29
CBWD3-207ENST00000611426 PTCD1O75127 700 aaKnown RBP29.35■■■□□ 2.29
CBWD3-207ENST00000611426 RC3H1Q5TC82 1133 aaKnown RBP29.35■■■□□ 2.29
CBWD3-207ENST00000611426 CNTNAP4Q9C0A0 1308 aa29.32■■■□□ 2.28
CBWD3-207ENST00000611426 NPC1L1Q9UHC9 1359 aa29.32■■■□□ 2.28
CBWD3-207ENST00000611426 SCN11AQ9UI33 1791 aa29.31■■■□□ 2.28
CBWD3-207ENST00000611426 ADRA2BP18089 450 aa29.3■■■□□ 2.28
CBWD3-207ENST00000611426 COL5A3P25940 1745 aaPredicted RBP29.3■■■□□ 2.28
CBWD3-207ENST00000611426 RPS6KA4O75676 772 aa29.29■■■□□ 2.28
CBWD3-207ENST00000611426 ARHGEF1Q92888 912 aaKnown RBP29.29■■■□□ 2.28
CBWD3-207ENST00000611426 LGR6Q9HBX8 967 aa29.29■■■□□ 2.28
CBWD3-207ENST00000611426 MMP10P09238 476 aa29.28■■■□□ 2.28
CBWD3-207ENST00000611426 NLGN1Q8N2Q7 840 aa29.28■■■□□ 2.28
CBWD3-207ENST00000611426 RFC4P35249 363 aa29.27■■■□□ 2.28
CBWD3-207ENST00000611426 MTHFSDQ2M296 383 aaKnown RBP29.27■■■□□ 2.28
CBWD3-207ENST00000611426 SLC52A2Q9HAB3 445 aa29.27■■■□□ 2.28
CBWD3-207ENST00000611426 RNMTO43148 476 aaKnown RBP29.26■■■□□ 2.27
CBWD3-207ENST00000611426 MYH14Q7Z406 1995 aaKnown RBP29.25■■■□□ 2.27
CBWD3-207ENST00000611426 CRKLP46109 303 aaKnown RBP29.25■■■□□ 2.27
CBWD3-207ENST00000611426 U2SURPO15042 1029 aaKnown RBP29.24■■■□□ 2.27
CBWD3-207ENST00000611426 GYS1P13807 737 aa29.22■■■□□ 2.27
CBWD3-207ENST00000611426 WWC3Q9ULE0 1092 aa29.21■■■□□ 2.27
CBWD3-207ENST00000611426 COL3A1P02461 1466 aaPredicted RBP29.2■■■□□ 2.27
CBWD3-207ENST00000611426 SLC39A6Q13433 755 aa29.2■■■□□ 2.26
CBWD3-207ENST00000611426 VIRMAQ69YN4 1812 aaKnown RBP29.19■■■□□ 2.26
CBWD3-207ENST00000611426 TJP1Q07157 1748 aa29.19■■■□□ 2.26
CBWD3-207ENST00000611426 DNAJC10Q8IXB1 793 aa29.18■■■□□ 2.26
CBWD3-207ENST00000611426 MRC1P22897 1456 aa29.18■■■□□ 2.26
CBWD3-207ENST00000611426 INTS5Q6P9B9 1019 aaKnown RBP29.17■■■□□ 2.26
CBWD3-207ENST00000611426 PARP3Q9Y6F1 533 aa29.17■■■□□ 2.26
CBWD3-207ENST00000611426 CICQ96RK0 1608 aaPredicted RBP29.16■■■□□ 2.26
CBWD3-207ENST00000611426 C4AP0C0L4 1744 aa29.16■■■□□ 2.26
CBWD3-207ENST00000611426 CFAP53Q96M91 514 aa29.15■■■□□ 2.26
CBWD3-207ENST00000611426 CCDC87Q9NVE4 849 aa29.15■■■□□ 2.26
CBWD3-207ENST00000611426 TGFB2P61812 414 aa29.14■■■□□ 2.26
CBWD3-207ENST00000611426 SRP68Q9UHB9 627 aaKnown RBP29.14■■■□□ 2.26
CBWD3-207ENST00000611426 GAS2L2Q8NHY3 880 aa29.13■■■□□ 2.25
CBWD3-207ENST00000611426 ADAMTS7Q9UKP4 1686 aa29.13■■■□□ 2.25
CBWD3-207ENST00000611426 USP42Q9H9J4 1324 aaKnown RBP29.12■■■□□ 2.25
CBWD3-207ENST00000611426 KIF13BQ9NQT8 1826 aa29.12■■■□□ 2.25
CBWD3-207ENST00000611426 GNAT3A8MTJ3 354 aa29.12■■■□□ 2.25
CBWD3-207ENST00000611426 CYP19A1P11511 503 aaPredicted RBP29.12■■■□□ 2.25
CBWD3-207ENST00000611426 FKBP8Q14318 412 aa29.11■■■□□ 2.25
CBWD3-207ENST00000611426 PXDNLA1KZ92 1463 aa29.1■■■□□ 2.25
CBWD3-207ENST00000611426 A0A0G2JLW4 131 aa29.1■■■□□ 2.25
CBWD3-207ENST00000611426 GIGYF1O75420 1035 aaPredicted RBP29.1■■■□□ 2.25
CBWD3-207ENST00000611426 C1QTNF8P60827 252 aa29.1■■■□□ 2.25
CBWD3-207ENST00000611426 TTC5Q8N0Z6 440 aa29.1■■■□□ 2.25
CBWD3-207ENST00000611426 VSIG10Q8N0Z9 540 aa29.1■■■□□ 2.25
CBWD3-207ENST00000611426 C10orf71Q711Q0 1435 aa29.1■■■□□ 2.25
CBWD3-207ENST00000611426 KCPQ6ZWJ8 1503 aa29.1■■■□□ 2.25
CBWD3-207ENST00000611426 ZPR1O75312 459 aa29.09■■■□□ 2.25
CBWD3-207ENST00000611426 TEFQ10587 303 aa29.09■■■□□ 2.25
CBWD3-207ENST00000611426 IL17REQ8NFR9 667 aa29.09■■■□□ 2.25
CBWD3-207ENST00000611426 NUDCQ9Y266 331 aa29.09■■■□□ 2.25
CBWD3-207ENST00000611426 N4BP2Q86UW6 1770 aaPredicted RBP29.07■■■□□ 2.24
CBWD3-207ENST00000611426 SOS1Q07889 1333 aaPredicted RBP29.07■■■□□ 2.24
CBWD3-207ENST00000611426 PPP2R1AP30153 589 aa29.07■■■□□ 2.24
CBWD3-207ENST00000611426 PRKAR2BP31323 418 aa29.06■■■□□ 2.24
CBWD3-207ENST00000611426 USPL1Q5W0Q7 1092 aa29.06■■■□□ 2.24
CBWD3-207ENST00000611426 ATP10DQ9P241 1426 aa29.05■■■□□ 2.24
CBWD3-207ENST00000611426 DPEP1P16444 411 aa29.05■■■□□ 2.24
CBWD3-207ENST00000611426 PHACTR3Q96KR7 559 aa29.05■■■□□ 2.24
CBWD3-207ENST00000611426 RSPH6AQ9H0K4 717 aa29.05■■■□□ 2.24
CBWD3-207ENST00000611426 BCS1LQ9Y276 419 aa29.05■■■□□ 2.24
CBWD3-207ENST00000611426 KIAA1551Q9HCM1 1747 aa29.05■■■□□ 2.24
CBWD3-207ENST00000611426 DDR1Q08345 913 aa29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms