RNA–Protein interactions for RNA: ENST00000611412.4

VPS45-212, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 5 BASIC

Gene VPS45, Length 2,064 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-212ENST00000611412 ZNF853P0CG23 659 aa15.52■□□□□ 0.08
VPS45-212ENST00000611412 SYTL4Q96C24 671 aaPredicted RBP15.52■□□□□ 0.08
VPS45-212ENST00000611412 MYH16Q9H6N6 1097 aa15.52■□□□□ 0.08
VPS45-212ENST00000611412 SLC52A2Q9HAB3 445 aa15.52■□□□□ 0.08
VPS45-212ENST00000611412 TSPYL4Q9UJ04 414 aa15.52■□□□□ 0.08
VPS45-212ENST00000611412 TRMT2AQ8IZ69 625 aaKnown RBP15.52■□□□□ 0.07
VPS45-212ENST00000611412 BTBD11A6QL63 1104 aa15.51■□□□□ 0.07
VPS45-212ENST00000611412 KCNQ3O43525 872 aa15.51■□□□□ 0.07
VPS45-212ENST00000611412 CENPBP07199 599 aaPredicted RBP15.51■□□□□ 0.07
VPS45-212ENST00000611412 BRWD3Q6RI45 1802 aa15.51■□□□□ 0.07
VPS45-212ENST00000611412 CHL1O00533 1208 aa15.5■□□□□ 0.07
VPS45-212ENST00000611412 SLC39A6Q13433 755 aa15.5■□□□□ 0.07
VPS45-212ENST00000611412 KRT24Q2M2I5 525 aa15.5■□□□□ 0.07
VPS45-212ENST00000611412 PRIM1P49642 420 aaKnown RBP15.5■□□□□ 0.07
VPS45-212ENST00000611412 EXOSC9Q06265 439 aaKnown RBP15.5■□□□□ 0.07
VPS45-212ENST00000611412 DOT1LQ8TEK3 1739 aa15.5■□□□□ 0.07
VPS45-212ENST00000611412 RGS12O14924 1447 aa15.49■□□□□ 0.07
VPS45-212ENST00000611412 ERVV-2B6SEH9 535 aa15.49■□□□□ 0.07
VPS45-212ENST00000611412 ELL2O00472 640 aaPredicted RBP15.49■□□□□ 0.07
VPS45-212ENST00000611412 SIPA1L3O60292 1781 aaPredicted RBP15.49■□□□□ 0.07
VPS45-212ENST00000611412 KAT6BQ8WYB5 2073 aa15.49■□□□□ 0.07
VPS45-212ENST00000611412 KRT27Q7Z3Y8 459 aa15.48■□□□□ 0.07
VPS45-212ENST00000611412 TMOD3Q9NYL9 352 aa15.48■□□□□ 0.07
VPS45-212ENST00000611412 MRC1P22897 1456 aa15.48■□□□□ 0.07
VPS45-212ENST00000611412 KCNQ2O43526 872 aa15.48■□□□□ 0.07
VPS45-212ENST00000611412 PIGBQ92521 554 aa15.47■□□□□ 0.07
VPS45-212ENST00000611412 ITGB4P16144 1822 aa15.47■□□□□ 0.07
VPS45-212ENST00000611412 PTF1AQ7RTS3 328 aa15.47■□□□□ 0.07
VPS45-212ENST00000611412 TSPYL6Q8N831 410 aa15.46■□□□□ 0.07
VPS45-212ENST00000611412 C8orf58Q8NAV2 365 aa15.46■□□□□ 0.07
VPS45-212ENST00000611412 KDM3BQ7LBC6 1761 aa15.45■□□□□ 0.06
VPS45-212ENST00000611412 ZNF790Q6PG37 636 aa15.45■□□□□ 0.06
VPS45-212ENST00000611412 ASAP1Q9ULH1 1129 aa15.45■□□□□ 0.06
VPS45-212ENST00000611412 EP400Q96L91 3159 aa15.44■□□□□ 0.06
VPS45-212ENST00000611412 EIF4A1P60842 406 aaKnown RBP15.44■□□□□ 0.06
VPS45-212ENST00000611412 TTC5Q8N0Z6 440 aa15.44■□□□□ 0.06
VPS45-212ENST00000611412 BCL9O00512 1426 aa15.43■□□□□ 0.06
VPS45-212ENST00000611412 BABAM1Q9NWV8 329 aa15.43■□□□□ 0.06
VPS45-212ENST00000611412 PRAMEF22A3QJZ6 481 aa15.42■□□□□ 0.06
VPS45-212ENST00000611412 TCERG1O14776 1098 aaKnown RBP15.42■□□□□ 0.06
VPS45-212ENST00000611412 PTCD1O75127 700 aaKnown RBP15.42■□□□□ 0.06
VPS45-212ENST00000611412 TWISTNBQ3B726 338 aaPredicted RBP15.42■□□□□ 0.06
VPS45-212ENST00000611412 ATG3Q9NT62 314 aa15.42■□□□□ 0.06
VPS45-212ENST00000611412 NECTIN2Q92692 538 aa15.42■□□□□ 0.06
VPS45-212ENST00000611412 ZNF496Q96IT1 587 aaPredicted RBP15.42■□□□□ 0.06
VPS45-212ENST00000611412 BCL2L13Q9BXK5 485 aa15.41■□□□□ 0.06
VPS45-212ENST00000611412 PAPPAQ13219 1627 aa15.4■□□□□ 0.06
VPS45-212ENST00000611412 VAMP4O75379 141 aa15.4■□□□□ 0.06
VPS45-212ENST00000611412 FAM196AQ6ZSG2 479 aa15.4■□□□□ 0.06
VPS45-212ENST00000611412 RBM42Q9BTD8 480 aaKnown RBP15.4■□□□□ 0.06
VPS45-212ENST00000611412 RCAN3Q9UKA8 241 aa15.4■□□□□ 0.06
VPS45-212ENST00000611412 TRIM37O94972 964 aa15.39■□□□□ 0.05
VPS45-212ENST00000611412 SBF2Q86WG5 1849 aa15.39■□□□□ 0.05
VPS45-212ENST00000611412 NHSQ6T4R5 1651 aa15.39■□□□□ 0.05
VPS45-212ENST00000611412 EIF2S2P20042 333 aaKnown RBP15.39■□□□□ 0.05
VPS45-212ENST00000611412 FMNL2Q96PY5 1086 aa15.39■□□□□ 0.05
VPS45-212ENST00000611412 KCPQ6ZWJ8 1503 aa15.38■□□□□ 0.05
VPS45-212ENST00000611412 BCAR3O75815 825 aa15.38■□□□□ 0.05
VPS45-212ENST00000611412 GIGYF1O75420 1035 aaPredicted RBP15.37■□□□□ 0.05
VPS45-212ENST00000611412 SUPT16HQ9Y5B9 1047 aaKnown RBP15.37■□□□□ 0.05
VPS45-212ENST00000611412 BTAF1O14981 1849 aa15.37■□□□□ 0.05
VPS45-212ENST00000611412 C5P01031 1676 aa15.36■□□□□ 0.05
VPS45-212ENST00000611412 UBR2Q8IWV8 1755 aa15.36■□□□□ 0.05
VPS45-212ENST00000611412 RARSP54136 660 aaKnown RBP15.36■□□□□ 0.05
VPS45-212ENST00000611412 SSH1Q8WYL5 1049 aa15.36■□□□□ 0.05
VPS45-212ENST00000611412 SLC4A9Q96Q91 983 aa15.36■□□□□ 0.05
VPS45-212ENST00000611412 PALLDQ8WX93 1383 aa15.36■□□□□ 0.05
VPS45-212ENST00000611412 BCL11BQ9C0K0 894 aaPredicted RBP15.36■□□□□ 0.05
VPS45-212ENST00000611412 HEG1Q9ULI3 1381 aa15.36■□□□□ 0.05
VPS45-212ENST00000611412 USP16Q9Y5T5 823 aa15.36■□□□□ 0.05
VPS45-212ENST00000611412 KCNQ4P56696 695 aa15.35■□□□□ 0.05
VPS45-212ENST00000611412 HDGFL1Q5TGJ6 251 aa15.35■□□□□ 0.05
VPS45-212ENST00000611412 SNRPA1P09661 255 aaKnown RBP15.34■□□□□ 0.05
VPS45-212ENST00000611412 SMC4Q9NTJ3 1288 aa15.34■□□□□ 0.05
VPS45-212ENST00000611412 PLIN1O60240 522 aa15.34■□□□□ 0.05
VPS45-212ENST00000611412 CT47B1P0C2W7 299 aaPredicted RBP15.34■□□□□ 0.05
VPS45-212ENST00000611412 PIP4K2AP48426 406 aaPredicted RBP15.34■□□□□ 0.05
VPS45-212ENST00000611412 DNAJC10Q8IXB1 793 aa15.34■□□□□ 0.05
VPS45-212ENST00000611412 ANXA1P04083 346 aa15.33■□□□□ 0.04
VPS45-212ENST00000611412 SMARCC1Q92922 1105 aaPredicted RBP15.32■□□□□ 0.04
VPS45-212ENST00000611412 LOC102724428A0A0B4J2F2 783 aa15.32■□□□□ 0.04
VPS45-212ENST00000611412 ATP6V1AP38606 617 aa15.32■□□□□ 0.04
VPS45-212ENST00000611412 SIK1P57059 783 aa15.32■□□□□ 0.04
VPS45-212ENST00000611412 FRAT1Q92837 279 aaPredicted RBP15.32■□□□□ 0.04
VPS45-212ENST00000611412 CCDC30Q5VVM6 783 aa15.31■□□□□ 0.04
VPS45-212ENST00000611412 MRPL50Q8N5N7 158 aaKnown RBP15.31■□□□□ 0.04
VPS45-212ENST00000611412 CHPF2Q9P2E5 772 aa15.31■□□□□ 0.04
VPS45-212ENST00000611412 SLC4A2P04920 1241 aa15.31■□□□□ 0.04
VPS45-212ENST00000611412 HOXB7P09629 217 aa15.31■□□□□ 0.04
VPS45-212ENST00000611412 ITPK1Q13572 414 aa15.31■□□□□ 0.04
VPS45-212ENST00000611412 APBA3O96018 575 aa15.3■□□□□ 0.04
VPS45-212ENST00000611412 IRX6P78412 446 aaPredicted RBP15.3■□□□□ 0.04
VPS45-212ENST00000611412 PROSER3Q2NL68 480 aa15.3■□□□□ 0.04
VPS45-212ENST00000611412 ALDH1L2Q3SY69 923 aa15.3■□□□□ 0.04
VPS45-212ENST00000611412 A1BGP04217 495 aa15.29■□□□□ 0.04
VPS45-212ENST00000611412 MYL6BP14649 208 aa15.29■□□□□ 0.04
VPS45-212ENST00000611412 G2E3Q7L622 706 aa15.29■□□□□ 0.04
VPS45-212ENST00000611412 STK31Q9BXU1 1019 aa15.29■□□□□ 0.04
VPS45-212ENST00000611412 TNNQ9UQP3 1299 aa15.29■□□□□ 0.04
VPS45-212ENST00000611412 RRP1P56182 461 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms