RNA–Protein interactions for RNA: ENST00000611360.4

SEM1-213, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 1 (best)

Gene SEM1, Length 577 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-213ENST00000611360 TNNQ9UQP3 1299 aa8.54□□□□□ -1.04
SEM1-213ENST00000611360 NOP58Q9Y2X3 529 aaKnown RBP8.54□□□□□ -1.04
SEM1-213ENST00000611360 PCDHB15Q9Y5E8 787 aa8.54□□□□□ -1.04
SEM1-213ENST00000611360 ABCC4O15439 1325 aa8.54□□□□□ -1.04
SEM1-213ENST00000611360 FAM83GA6ND36 823 aa8.53□□□□□ -1.04
SEM1-213ENST00000611360 IP6K1Q92551 441 aa8.53□□□□□ -1.04
SEM1-213ENST00000611360 C19orf44Q9H6X5 657 aa8.53□□□□□ -1.04
SEM1-213ENST00000611360 ZBTB40Q9NUA8 1239 aa8.53□□□□□ -1.04
SEM1-213ENST00000611360 PTPRCP08575 1304 aa8.53□□□□□ -1.04
SEM1-213ENST00000611360 MED1Q15648 1581 aaPredicted RBP8.52□□□□□ -1.04
SEM1-213ENST00000611360 C1orf167Q5SNV9 1468 aa8.52□□□□□ -1.05
SEM1-213ENST00000611360 MAP3K5Q99683 1374 aa8.52□□□□□ -1.05
SEM1-213ENST00000611360 DCTN1Q14203 1278 aa8.52□□□□□ -1.05
SEM1-213ENST00000611360 MTHFSDQ2M296 383 aaKnown RBP8.52□□□□□ -1.05
SEM1-213ENST00000611360 C8orf34Q49A92 452 aa8.52□□□□□ -1.05
SEM1-213ENST00000611360 TSPYL6Q8N831 410 aa8.52□□□□□ -1.05
SEM1-213ENST00000611360 C8orf58Q8NAV2 365 aa8.52□□□□□ -1.05
SEM1-213ENST00000611360 USP19O94966 1318 aa8.52□□□□□ -1.05
SEM1-213ENST00000611360 MSH6P52701 1360 aa8.51□□□□□ -1.05
SEM1-213ENST00000611360 GNAT3A8MTJ3 354 aa8.51□□□□□ -1.05
SEM1-213ENST00000611360 NUTM2GQ5VZR2 741 aa8.51□□□□□ -1.05
SEM1-213ENST00000611360 MCM10Q7L590 875 aa8.51□□□□□ -1.05
SEM1-213ENST00000611360 SMC5Q8IY18 1101 aa8.51□□□□□ -1.05
SEM1-213ENST00000611360 TSPYL4Q9UJ04 414 aa8.51□□□□□ -1.05
SEM1-213ENST00000611360 NCAPD2Q15021 1401 aa8.51□□□□□ -1.05
SEM1-213ENST00000611360 TRPM3Q9HCF6 1732 aaPredicted RBP8.51□□□□□ -1.05
SEM1-213ENST00000611360 LTN1O94822 1766 aa8.5□□□□□ -1.05
SEM1-213ENST00000611360 PLEKHG2Q9H7P9 1386 aa8.5□□□□□ -1.05
SEM1-213ENST00000611360 ABCC6O95255 1503 aa8.5□□□□□ -1.05
SEM1-213ENST00000611360 OVOS2A0A0G2JMS6 1433 aa8.5□□□□□ -1.05
SEM1-213ENST00000611360 ATF3P18847 181 aa8.5□□□□□ -1.05
SEM1-213ENST00000611360 SKAP1Q86WV1 359 aa8.5□□□□□ -1.05
SEM1-213ENST00000611360 RBM33Q96EV2 1170 aaKnown RBP8.5□□□□□ -1.05
SEM1-213ENST00000611360 CHMP4AQ9BY43 222 aa8.5□□□□□ -1.05
SEM1-213ENST00000611360 SLAIN2Q9P270 581 aa8.5□□□□□ -1.05
SEM1-213ENST00000611360 PDZRN3Q9UPQ7 1066 aa8.5□□□□□ -1.05
SEM1-213ENST00000611360 SOCS7O14512 581 aa8.49□□□□□ -1.05
SEM1-213ENST00000611360 PLCB2Q00722 1185 aa8.49□□□□□ -1.05
SEM1-213ENST00000611360 INTS3Q68E01 1043 aaKnown RBP8.49□□□□□ -1.05
SEM1-213ENST00000611360 NPM2Q86SE8 214 aaKnown RBP8.49□□□□□ -1.05
SEM1-213ENST00000611360 GCC1Q96CN9 775 aa8.49□□□□□ -1.05
SEM1-213ENST00000611360 ROBO1Q9Y6N7 1651 aa8.49□□□□□ -1.05
SEM1-213ENST00000611360 CAMTA1Q9Y6Y1 1673 aa8.49□□□□□ -1.05
SEM1-213ENST00000611360 VIRMAQ69YN4 1812 aaKnown RBP8.48□□□□□ -1.05
SEM1-213ENST00000611360 ELL2O00472 640 aaPredicted RBP8.48□□□□□ -1.05
SEM1-213ENST00000611360 RIOK3O14730 519 aaKnown RBP8.48□□□□□ -1.05
SEM1-213ENST00000611360 ZBTB7BO15156 539 aaPredicted RBP8.48□□□□□ -1.05
SEM1-213ENST00000611360 FOXO3O43524 673 aa8.48□□□□□ -1.05
SEM1-213ENST00000611360 GCP02774 474 aa8.48□□□□□ -1.05
SEM1-213ENST00000611360 AMOTQ4VCS5 1084 aa8.48□□□□□ -1.05
SEM1-213ENST00000611360 CADPS2Q86UW7 1296 aa8.48□□□□□ -1.05
SEM1-213ENST00000611360 ARHGEF25Q86VW2 580 aa8.48□□□□□ -1.05
SEM1-213ENST00000611360 ORAI2Q96SN7 254 aa8.48□□□□□ -1.05
SEM1-213ENST00000611360 UPF2Q9HAU5 1272 aaKnown RBP8.48□□□□□ -1.05
SEM1-213ENST00000611360 CEMIPQ8WUJ3 1361 aa8.48□□□□□ -1.05
SEM1-213ENST00000611360 RGS12O14924 1447 aa8.47□□□□□ -1.05
SEM1-213ENST00000611360 ALS2Q96Q42 1657 aa8.47□□□□□ -1.05
SEM1-213ENST00000611360 NUCB1Q02818 461 aa8.47□□□□□ -1.05
SEM1-213ENST00000611360 TAF7Q15545 349 aaPredicted RBP8.47□□□□□ -1.05
SEM1-213ENST00000611360 KRT28Q7Z3Y7 464 aa8.47□□□□□ -1.05
SEM1-213ENST00000611360 LTV1Q96GA3 475 aaPredicted RBP8.47□□□□□ -1.05
SEM1-213ENST00000611360 STK31Q9BXU1 1019 aa8.47□□□□□ -1.05
SEM1-213ENST00000611360 NPHP3Q7Z494 1330 aa8.47□□□□□ -1.05
SEM1-213ENST00000611360 HOXB7P09629 217 aa8.46□□□□□ -1.06
SEM1-213ENST00000611360 CCT4P50991 539 aaKnown RBP8.46□□□□□ -1.06
SEM1-213ENST00000611360 PLEKHO1Q53GL0 409 aaPredicted RBP8.46□□□□□ -1.06
SEM1-213ENST00000611360 CCDC30Q5VVM6 783 aa8.46□□□□□ -1.06
SEM1-213ENST00000611360 AHDC1Q5TGY3 1603 aaPredicted RBP8.46□□□□□ -1.06
SEM1-213ENST00000611360 TNS3Q68CZ2 1445 aa8.46□□□□□ -1.06
SEM1-213ENST00000611360 PXDNLA1KZ92 1463 aa8.45□□□□□ -1.06
SEM1-213ENST00000611360 COL16A1Q07092 1604 aaPredicted RBP8.45□□□□□ -1.06
SEM1-213ENST00000611360 EIF5BO60841 1220 aaKnown RBP8.45□□□□□ -1.06
SEM1-213ENST00000611360 AKAP4Q5JQC9 854 aa8.45□□□□□ -1.06
SEM1-213ENST00000611360 NBPF6Q5VWK0 638 aa8.45□□□□□ -1.06
SEM1-213ENST00000611360 CHD1LQ86WJ1 897 aa8.45□□□□□ -1.06
SEM1-213ENST00000611360 NBPF4Q96M43 638 aa8.45□□□□□ -1.06
SEM1-213ENST00000611360 SGIP1Q9BQI5 828 aa8.45□□□□□ -1.06
SEM1-213ENST00000611360 DAXXQ9UER7 740 aaPredicted RBP8.45□□□□□ -1.06
SEM1-213ENST00000611360 RGS17Q9UGC6 210 aaPredicted RBP8.45□□□□□ -1.06
SEM1-213ENST00000611360 LMO7Q8WWI1 1683 aa8.45□□□□□ -1.06
SEM1-213ENST00000611360 FAM208AQ9UK61 1670 aaKnown RBP8.45□□□□□ -1.06
SEM1-213ENST00000611360 PSEN1P49768 467 aa8.44□□□□□ -1.06
SEM1-213ENST00000611360 KRT24Q2M2I5 525 aa8.44□□□□□ -1.06
SEM1-213ENST00000611360 C1orf141Q5JVX7 400 aa8.44□□□□□ -1.06
SEM1-213ENST00000611360 LMOD2Q6P5Q4 547 aa8.44□□□□□ -1.06
SEM1-213ENST00000611360 ZNF467Q7Z7K2 595 aaPredicted RBP8.44□□□□□ -1.06
SEM1-213ENST00000611360 RPAP2Q8IXW5 612 aaPredicted RBP8.44□□□□□ -1.06
SEM1-213ENST00000611360 IL17REQ8NFR9 667 aa8.44□□□□□ -1.06
SEM1-213ENST00000611360 ANKRD24Q8TF21 1146 aa8.44□□□□□ -1.06
SEM1-213ENST00000611360 JCADQ9P266 1359 aa8.44□□□□□ -1.06
SEM1-213ENST00000611360 ATP10DQ9P241 1426 aa8.44□□□□□ -1.06
SEM1-213ENST00000611360 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.43□□□□□ -1.06
SEM1-213ENST00000611360 ZBTB7CA1YPR0 619 aa8.43□□□□□ -1.06
SEM1-213ENST00000611360 HMMRO75330 724 aa8.43□□□□□ -1.06
SEM1-213ENST00000611360 POTEIP0CG38 1075 aa8.43□□□□□ -1.06
SEM1-213ENST00000611360 XPCQ01831 940 aaPredicted RBP8.43□□□□□ -1.06
SEM1-213ENST00000611360 ZNF530Q6P9A1 599 aaPredicted RBP8.43□□□□□ -1.06
SEM1-213ENST00000611360 BRINP3Q76B58 766 aa8.43□□□□□ -1.06
SEM1-213ENST00000611360 USHBP1Q8N6Y0 703 aa8.43□□□□□ -1.06
SEM1-213ENST00000611360 ZFP91Q96JP5 570 aaPredicted RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms