RNA–Protein interactions for RNA: ENST00000611269.4

UBE3C-209, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2 BASIC

Gene UBE3C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-209ENST00000611269 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.7■■■□□ 2.18
UBE3C-209ENST00000611269 CFAP44Q96MT7 982 aa28.7■■■□□ 2.18
UBE3C-209ENST00000611269 GNAI1P63096 354 aa28.69■■■□□ 2.18
UBE3C-209ENST00000611269 MYH16Q9H6N6 1097 aa28.69■■■□□ 2.18
UBE3C-209ENST00000611269 ZNF853P0CG23 659 aa28.68■■■□□ 2.18
UBE3C-209ENST00000611269 TSR2Q969E8 191 aaKnown RBP28.68■■■□□ 2.18
UBE3C-209ENST00000611269 TEFQ10587 303 aa28.68■■■□□ 2.18
UBE3C-209ENST00000611269 FANCIQ9NVI1 1328 aa28.67■■■□□ 2.18
UBE3C-209ENST00000611269 MARCH10Q8NA82 808 aaPredicted RBP28.67■■■□□ 2.18
UBE3C-209ENST00000611269 SIPA1L3O60292 1781 aaPredicted RBP28.66■■■□□ 2.18
UBE3C-209ENST00000611269 RBM6P78332 1123 aaKnown RBP28.66■■■□□ 2.18
UBE3C-209ENST00000611269 TOGARAM1Q9Y4F4 1720 aa28.66■■■□□ 2.18
UBE3C-209ENST00000611269 SEPT12Q8IYM1 358 aa28.66■■■□□ 2.18
UBE3C-209ENST00000611269 MBIPQ9NS73 344 aa28.66■■■□□ 2.18
UBE3C-209ENST00000611269 MIS18AQ9NYP9 233 aa28.66■■■□□ 2.18
UBE3C-209ENST00000611269 TAF7Q15545 349 aaPredicted RBP28.65■■■□□ 2.18
UBE3C-209ENST00000611269 CHL1O00533 1208 aa28.64■■■□□ 2.18
UBE3C-209ENST00000611269 MRC1P22897 1456 aa28.64■■■□□ 2.17
UBE3C-209ENST00000611269 SLC52A2Q9HAB3 445 aa28.63■■■□□ 2.17
UBE3C-209ENST00000611269 CRBNQ96SW2 442 aa28.63■■■□□ 2.17
UBE3C-209ENST00000611269 NFATC2IPQ8NCF5 419 aa28.61■■■□□ 2.17
UBE3C-209ENST00000611269 TSPYL4Q9UJ04 414 aa28.61■■■□□ 2.17
UBE3C-209ENST00000611269 ERVV-2B6SEH9 535 aa28.61■■■□□ 2.17
UBE3C-209ENST00000611269 CABP4P57796 275 aa28.61■■■□□ 2.17
UBE3C-209ENST00000611269 POTEAQ6S8J7 498 aa28.6■■■□□ 2.17
UBE3C-209ENST00000611269 KAT6BQ8WYB5 2073 aa28.6■■■□□ 2.17
UBE3C-209ENST00000611269 RXRBP28702 533 aa28.59■■■□□ 2.17
UBE3C-209ENST00000611269 C20orf194Q5TEA3 1177 aa28.59■■■□□ 2.17
UBE3C-209ENST00000611269 DOT1LQ8TEK3 1739 aa28.59■■■□□ 2.17
UBE3C-209ENST00000611269 BTBD11A6QL63 1104 aa28.58■■■□□ 2.17
UBE3C-209ENST00000611269 BABAM1Q9NWV8 329 aa28.58■■■□□ 2.17
UBE3C-209ENST00000611269 ITGB4P16144 1822 aa28.58■■■□□ 2.17
UBE3C-209ENST00000611269 BRWD3Q6RI45 1802 aa28.58■■■□□ 2.17
UBE3C-209ENST00000611269 KDM3BQ7LBC6 1761 aa28.58■■■□□ 2.17
UBE3C-209ENST00000611269 EXOSC9Q06265 439 aaKnown RBP28.57■■■□□ 2.16
UBE3C-209ENST00000611269 BCAR3O75815 825 aa28.55■■■□□ 2.16
UBE3C-209ENST00000611269 FAM182BQ5T319 152 aa28.54■■■□□ 2.16
UBE3C-209ENST00000611269 TMOD3Q9NYL9 352 aa28.53■■■□□ 2.16
UBE3C-209ENST00000611269 KCNQ3O43525 872 aa28.53■■■□□ 2.16
UBE3C-209ENST00000611269 SYTL4Q96C24 671 aaPredicted RBP28.52■■■□□ 2.16
UBE3C-209ENST00000611269 ACSBG1Q96GR2 724 aa28.52■■■□□ 2.16
UBE3C-209ENST00000611269 RBM19Q9Y4C8 960 aaKnown RBP28.52■■■□□ 2.16
UBE3C-209ENST00000611269 CT47B1P0C2W7 299 aaPredicted RBP28.51■■■□□ 2.15
UBE3C-209ENST00000611269 SLC39A6Q13433 755 aa28.51■■■□□ 2.15
UBE3C-209ENST00000611269 PRIM1P49642 420 aaKnown RBP28.51■■■□□ 2.15
UBE3C-209ENST00000611269 RARSP54136 660 aaKnown RBP28.51■■■□□ 2.15
UBE3C-209ENST00000611269 KRT24Q2M2I5 525 aa28.51■■■□□ 2.15
UBE3C-209ENST00000611269 C8orf58Q8NAV2 365 aa28.51■■■□□ 2.15
UBE3C-209ENST00000611269 PDE3AQ14432 1141 aa28.5■■■□□ 2.15
UBE3C-209ENST00000611269 PIGBQ92521 554 aa28.5■■■□□ 2.15
UBE3C-209ENST00000611269 RGS12O14924 1447 aa28.5■■■□□ 2.15
UBE3C-209ENST00000611269 ZNF790Q6PG37 636 aa28.49■■■□□ 2.15
UBE3C-209ENST00000611269 KRT27Q7Z3Y8 459 aa28.49■■■□□ 2.15
UBE3C-209ENST00000611269 TSPYL6Q8N831 410 aa28.49■■■□□ 2.15
UBE3C-209ENST00000611269 BCL9O00512 1426 aa28.49■■■□□ 2.15
UBE3C-209ENST00000611269 PAPPAQ13219 1627 aa28.48■■■□□ 2.15
UBE3C-209ENST00000611269 ELL2O00472 640 aaPredicted RBP28.48■■■□□ 2.15
UBE3C-209ENST00000611269 EIF4A1P60842 406 aaKnown RBP28.47■■■□□ 2.15
UBE3C-209ENST00000611269 EP400Q96L91 3159 aa28.46■■■□□ 2.15
UBE3C-209ENST00000611269 KCNQ2O43526 872 aa28.45■■■□□ 2.15
UBE3C-209ENST00000611269 TWISTNBQ3B726 338 aaPredicted RBP28.45■■■□□ 2.15
UBE3C-209ENST00000611269 TTC5Q8N0Z6 440 aa28.45■■■□□ 2.15
UBE3C-209ENST00000611269 SBF2Q86WG5 1849 aa28.44■■■□□ 2.14
UBE3C-209ENST00000611269 UBR2Q8IWV8 1755 aa28.43■■■□□ 2.14
UBE3C-209ENST00000611269 VAMP4O75379 141 aa28.42■■■□□ 2.14
UBE3C-209ENST00000611269 ASAP1Q9ULH1 1129 aa28.42■■■□□ 2.14
UBE3C-209ENST00000611269 NHSQ6T4R5 1651 aa28.42■■■□□ 2.14
UBE3C-209ENST00000611269 ZNF496Q96IT1 587 aaPredicted RBP28.41■■■□□ 2.14
UBE3C-209ENST00000611269 ATG3Q9NT62 314 aa28.4■■■□□ 2.14
UBE3C-209ENST00000611269 HEG1Q9ULI3 1381 aa28.4■■■□□ 2.14
UBE3C-209ENST00000611269 KCPQ6ZWJ8 1503 aa28.4■■■□□ 2.14
UBE3C-209ENST00000611269 FAM196AQ6ZSG2 479 aa28.39■■■□□ 2.14
UBE3C-209ENST00000611269 PTF1AQ7RTS3 328 aa28.39■■■□□ 2.14
UBE3C-209ENST00000611269 FMNL2Q96PY5 1086 aa28.38■■■□□ 2.13
UBE3C-209ENST00000611269 PTCD1O75127 700 aaKnown RBP28.37■■■□□ 2.13
UBE3C-209ENST00000611269 GIGYF1O75420 1035 aaPredicted RBP28.37■■■□□ 2.13
UBE3C-209ENST00000611269 CANXP27824 592 aaKnown RBP28.37■■■□□ 2.13
UBE3C-209ENST00000611269 BTAF1O14981 1849 aa28.36■■■□□ 2.13
UBE3C-209ENST00000611269 C5P01031 1676 aa28.36■■■□□ 2.13
UBE3C-209ENST00000611269 KDM2BQ8NHM5 1336 aa28.35■■■□□ 2.13
UBE3C-209ENST00000611269 PRAMEF22A3QJZ6 481 aa28.35■■■□□ 2.13
UBE3C-209ENST00000611269 BCL2L13Q9BXK5 485 aa28.35■■■□□ 2.13
UBE3C-209ENST00000611269 SOS1Q07889 1333 aaPredicted RBP28.35■■■□□ 2.13
UBE3C-209ENST00000611269 ZNF428Q96B54 188 aa28.34■■■□□ 2.13
UBE3C-209ENST00000611269 HOXB7P09629 217 aa28.34■■■□□ 2.13
UBE3C-209ENST00000611269 SSH1Q8WYL5 1049 aa28.34■■■□□ 2.13
UBE3C-209ENST00000611269 FRAT1Q92837 279 aaPredicted RBP28.34■■■□□ 2.13
UBE3C-209ENST00000611269 AAMPQ13685 434 aa28.33■■■□□ 2.13
UBE3C-209ENST00000611269 TCERG1O14776 1098 aaKnown RBP28.32■■■□□ 2.12
UBE3C-209ENST00000611269 CENPQQ7L2Z9 268 aaPredicted RBP28.32■■■□□ 2.12
UBE3C-209ENST00000611269 SNRPA1P09661 255 aaKnown RBP28.32■■■□□ 2.12
UBE3C-209ENST00000611269 NECTIN2Q92692 538 aa28.32■■■□□ 2.12
UBE3C-209ENST00000611269 ALDH1L2Q3SY69 923 aa28.31■■■□□ 2.12
UBE3C-209ENST00000611269 RBM42Q9BTD8 480 aaKnown RBP28.31■■■□□ 2.12
UBE3C-209ENST00000611269 SMC4Q9NTJ3 1288 aa28.31■■■□□ 2.12
UBE3C-209ENST00000611269 EIF2S2P20042 333 aaKnown RBP28.3■■■□□ 2.12
UBE3C-209ENST00000611269 HDGFL1Q5TGJ6 251 aa28.3■■■□□ 2.12
UBE3C-209ENST00000611269 BCL11BQ9C0K0 894 aaPredicted RBP28.3■■■□□ 2.12
UBE3C-209ENST00000611269 PANK1Q8TE04 598 aa28.29■■■□□ 2.12
UBE3C-209ENST00000611269 PALLDQ8WX93 1383 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms