RNA–Protein interactions for RNA: ENST00000611174.4

CENPE-208, Transcript of centromere protein E, humanhuman

TSL 5 BASIC

Gene CENPE, Length 8,260 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPE-208ENST00000611174 METTL24Q5JXM2 366 aa5.61□□□□□ -1.51
CENPE-208ENST00000611174 DDX46Q7L014 1031 aaKnown RBP5.61□□□□□ -1.51
CENPE-208ENST00000611174 KRT28Q7Z3Y7 464 aa5.61□□□□□ -1.51
CENPE-208ENST00000611174 NECAB1Q8N987 351 aa5.61□□□□□ -1.51
CENPE-208ENST00000611174 TNMDQ9H2S6 317 aa5.61□□□□□ -1.51
CENPE-208ENST00000611174 KIF6Q6ZMV9 814 aa5.61□□□□□ -1.51
CENPE-208ENST00000611174 SPATA32Q96LK8 384 aa5.61□□□□□ -1.51
CENPE-208ENST00000611174 TPM1P09493 284 aa5.61□□□□□ -1.51
CENPE-208ENST00000611174 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.61□□□□□ -1.51
CENPE-208ENST00000611174 LRP2BPQ9P2M1 347 aa5.61□□□□□ -1.51
CENPE-208ENST00000611174 IFIT1P09914 478 aaKnown RBP5.61□□□□□ -1.51
CENPE-208ENST00000611174 PDE1AP54750 535 aa5.61□□□□□ -1.51
CENPE-208ENST00000611174 IKQ13123 557 aaPredicted RBP5.61□□□□□ -1.51
CENPE-208ENST00000611174 SART3Q15020 963 aaKnown RBP5.61□□□□□ -1.51
CENPE-208ENST00000611174 AMOTL1Q8IY63 956 aa5.61□□□□□ -1.51
CENPE-208ENST00000611174 USP25Q9UHP3 1055 aa5.61□□□□□ -1.51
CENPE-208ENST00000611174 MAP3K2Q9Y2U5 619 aa5.61□□□□□ -1.51
CENPE-208ENST00000611174 HIP1O00291 1037 aa5.61□□□□□ -1.51
CENPE-208ENST00000611174 HSPA2P54652 639 aa5.61□□□□□ -1.51
CENPE-208ENST00000611174 CWF19L2Q2TBE0 894 aaKnown RBP5.61□□□□□ -1.51
CENPE-208ENST00000611174 CHPF2Q9P2E5 772 aa5.61□□□□□ -1.51
CENPE-208ENST00000611174 RBM27Q9P2N5 1060 aaKnown RBP5.61□□□□□ -1.51
CENPE-208ENST00000611174 IQSEC3Q9UPP2 1182 aaPredicted RBP5.61□□□□□ -1.51
CENPE-208ENST00000611174 SUPT6HQ7KZ85 1726 aaKnown RBP5.61□□□□□ -1.51
CENPE-208ENST00000611174 MAP3K19Q56UN5 1328 aa5.61□□□□□ -1.51
CENPE-208ENST00000611174 MINDY4BA8MYZ0 360 aa5.61□□□□□ -1.51
CENPE-208ENST00000611174 PHAXQ9H814 394 aaKnown RBP5.61□□□□□ -1.51
CENPE-208ENST00000611174 ZBTB40Q9NUA8 1239 aa5.61□□□□□ -1.51
CENPE-208ENST00000611174 BAG4O95429 457 aaKnown RBP5.61□□□□□ -1.51
CENPE-208ENST00000611174 LDHAL6AQ6ZMR3 332 aa5.61□□□□□ -1.51
CENPE-208ENST00000611174 ANKRD44Q8N8A2 993 aa5.61□□□□□ -1.51
CENPE-208ENST00000611174 SMC5Q8IY18 1101 aa5.6□□□□□ -1.51
CENPE-208ENST00000611174 RAI14Q9P0K7 980 aa5.6□□□□□ -1.51
CENPE-208ENST00000611174 GOLIM4O00461 696 aa5.6□□□□□ -1.51
CENPE-208ENST00000611174 CCDC192P0DO97 292 aa5.6□□□□□ -1.51
CENPE-208ENST00000611174 TDO2P48775 406 aa5.6□□□□□ -1.51
CENPE-208ENST00000611174 PRAG1Q86YV5 1406 aa5.6□□□□□ -1.51
CENPE-208ENST00000611174 CPA1P15085 419 aa5.6□□□□□ -1.51
CENPE-208ENST00000611174 XAGE3Q8WTP9 111 aa5.6□□□□□ -1.51
CENPE-208ENST00000611174 LMBR1LQ6UX01 489 aa5.6□□□□□ -1.51
CENPE-208ENST00000611174 MNS1Q8NEH6 495 aa5.6□□□□□ -1.51
CENPE-208ENST00000611174 ANKRD24Q8TF21 1146 aa5.6□□□□□ -1.51
CENPE-208ENST00000611174 ANKRD13DQ6ZTN6 518 aa5.6□□□□□ -1.51
CENPE-208ENST00000611174 ZGPATQ8N5A5 531 aaKnown RBP5.6□□□□□ -1.51
CENPE-208ENST00000611174 ANKRD20A12PQ8NF67 263 aa5.6□□□□□ -1.51
CENPE-208ENST00000611174 TRMT112Q9UI30 125 aaKnown RBP5.6□□□□□ -1.51
CENPE-208ENST00000611174 HDAC1Q13547 482 aaPredicted RBP5.59□□□□□ -1.51
CENPE-208ENST00000611174 MEX3CQ5U5Q3 659 aaKnown RBP5.59□□□□□ -1.51
CENPE-208ENST00000611174 BRF1Q92994 677 aa5.59□□□□□ -1.51
CENPE-208ENST00000611174 TMX3Q96JJ7 454 aa5.59□□□□□ -1.51
CENPE-208ENST00000611174 NUP62CLQ9H1M0 184 aa5.59□□□□□ -1.51
CENPE-208ENST00000611174 PPP1R1BQ9UD71 204 aaPredicted RBP5.59□□□□□ -1.51
CENPE-208ENST00000611174 LIMCH1Q9UPQ0 1083 aa5.59□□□□□ -1.51
CENPE-208ENST00000611174 CEP89Q96ST8 783 aa5.59□□□□□ -1.51
CENPE-208ENST00000611174 TRIM34Q9BYJ4 488 aa5.59□□□□□ -1.51
CENPE-208ENST00000611174 PPP6R1Q9UPN7 881 aa5.59□□□□□ -1.51
CENPE-208ENST00000611174 HCLS1P14317 486 aaPredicted RBP5.59□□□□□ -1.51
CENPE-208ENST00000611174 NUCB1Q02818 461 aa5.59□□□□□ -1.51
CENPE-208ENST00000611174 TTC22Q5TAA0 569 aa5.59□□□□□ -1.51
CENPE-208ENST00000611174 MRPL50Q8N5N7 158 aaKnown RBP5.59□□□□□ -1.51
CENPE-208ENST00000611174 AMOTQ4VCS5 1084 aa5.59□□□□□ -1.51
CENPE-208ENST00000611174 TRIM22Q8IYM9 498 aa5.59□□□□□ -1.51
CENPE-208ENST00000611174 NFATC2IPQ8NCF5 419 aa5.59□□□□□ -1.51
CENPE-208ENST00000611174 CCDC39Q9UFE4 941 aa5.59□□□□□ -1.51
CENPE-208ENST00000611174 BIN1O00499 593 aa5.59□□□□□ -1.52
CENPE-208ENST00000611174 OFD1O75665 1012 aa5.59□□□□□ -1.52
CENPE-208ENST00000611174 CCDC173Q0VFZ6 552 aa5.59□□□□□ -1.52
CENPE-208ENST00000611174 KLHDC4Q8TBB5 520 aa5.59□□□□□ -1.52
CENPE-208ENST00000611174 SERPINC1P01008 464 aa5.59□□□□□ -1.52
CENPE-208ENST00000611174 TNNT3P45378 269 aaPredicted RBP5.59□□□□□ -1.52
CENPE-208ENST00000611174 ANKRD1Q15327 319 aa5.59□□□□□ -1.52
CENPE-208ENST00000611174 AIDAQ96BJ3 306 aa5.59□□□□□ -1.52
CENPE-208ENST00000611174 NACAP1Q9BZK3 213 aa5.59□□□□□ -1.52
CENPE-208ENST00000611174 PLCH2O75038 1416 aa5.58□□□□□ -1.52
CENPE-208ENST00000611174 XRCC6P12956 609 aaKnown RBP eCLIP5.58□□□□□ -1.525e-6■■□□□ 12
CENPE-208ENST00000611174 IFIT5Q13325 482 aaKnown RBP5.58□□□□□ -1.52
CENPE-208ENST00000611174 FAM173BQ6P4H8 233 aa5.58□□□□□ -1.52
CENPE-208ENST00000611174 STARD3NLO95772 234 aa5.58□□□□□ -1.52
CENPE-208ENST00000611174 GCP02774 474 aa5.58□□□□□ -1.52
CENPE-208ENST00000611174 XBP1P17861 261 aa5.58□□□□□ -1.52
CENPE-208ENST00000611174 ISM2Q6H9L7 571 aa5.58□□□□□ -1.52
CENPE-208ENST00000611174 IFNL2Q8IZJ0 200 aa5.58□□□□□ -1.52
CENPE-208ENST00000611174 ARHGAP45Q92619 1136 aa5.58□□□□□ -1.52
CENPE-208ENST00000611174 ORAI2Q96SN7 254 aa5.58□□□□□ -1.52
CENPE-208ENST00000611174 UBAC1Q9BSL1 405 aa5.58□□□□□ -1.52
CENPE-208ENST00000611174 TMOD3Q9NYL9 352 aa5.58□□□□□ -1.52
CENPE-208ENST00000611174 DENND4BO75064 1496 aaPredicted RBP5.58□□□□□ -1.52
CENPE-208ENST00000611174 A0A0U1RQG5 324 aaPredicted RBP5.58□□□□□ -1.52
CENPE-208ENST00000611174 NAP1L1P55209 391 aaKnown RBP5.58□□□□□ -1.52
CENPE-208ENST00000611174 DHX8Q14562 1220 aaKnown RBP5.58□□□□□ -1.52
CENPE-208ENST00000611174 HELBQ8NG08 1087 aaPredicted RBP5.58□□□□□ -1.52
CENPE-208ENST00000611174 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.58□□□□□ -1.525e-8■■■□□ 15.1
CENPE-208ENST00000611174 DCTPP1Q9H773 170 aa5.58□□□□□ -1.52
CENPE-208ENST00000611174 ANKRD36BQ8N2N9 1353 aa5.58□□□□□ -1.52
CENPE-208ENST00000611174 SSBP05455 408 aaKnown RBP eCLIP5.58□□□□□ -1.52
CENPE-208ENST00000611174 OLFM4Q6UX06 510 aa5.58□□□□□ -1.52
CENPE-208ENST00000611174 ZSCAN30Q86W11 494 aa5.58□□□□□ -1.52
CENPE-208ENST00000611174 CCDC144CPQ8IYA2 1237 aa5.58□□□□□ -1.52
CENPE-208ENST00000611174 CCDC47Q96A33 483 aaKnown RBP5.58□□□□□ -1.52
CENPE-208ENST00000611174 ZSCAN31Q96LW9 406 aaPredicted RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms