RNA–Protein interactions for RNA: ENST00000610974.1

RN7SL539P-201, Transcript of RNA, 7SL, cytoplasmic 539, pseudogene, humanhuman

BASIC

Gene RN7SL539P, Length 291 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL539P-201ENST00000610974 HSPA6P17066 643 aa14.03□□□□□ -0.16
RN7SL539P-201ENST00000610974 PLEKHG2Q9H7P9 1386 aa14.03□□□□□ -0.16
RN7SL539P-201ENST00000610974 CICQ96RK0 1608 aaPredicted RBP14.03□□□□□ -0.16
RN7SL539P-201ENST00000610974 KIF13BQ9NQT8 1826 aa14.02□□□□□ -0.16
RN7SL539P-201ENST00000610974 ZNF831Q5JPB2 1677 aa14.02□□□□□ -0.16
RN7SL539P-201ENST00000610974 KDRP35968 1356 aa14.01□□□□□ -0.17
RN7SL539P-201ENST00000610974 EIF4A2Q14240 407 aaKnown RBP14.01□□□□□ -0.17
RN7SL539P-201ENST00000610974 RTCBQ9Y3I0 505 aaKnown RBP14.01□□□□□ -0.17
RN7SL539P-201ENST00000610974 KIAA1551Q9HCM1 1747 aa14.01□□□□□ -0.17
RN7SL539P-201ENST00000610974 PXDNLA1KZ92 1463 aa14□□□□□ -0.17
RN7SL539P-201ENST00000610974 TGFB2P61812 414 aa14□□□□□ -0.17
RN7SL539P-201ENST00000610974 TRAPPC3LQ5T215 181 aa14□□□□□ -0.17
RN7SL539P-201ENST00000610974 NLGN1Q8N2Q7 840 aa14□□□□□ -0.17
RN7SL539P-201ENST00000610974 N4BP2Q86UW6 1770 aaPredicted RBP13.99□□□□□ -0.17
RN7SL539P-201ENST00000610974 COL5A3P25940 1745 aaPredicted RBP13.99□□□□□ -0.17
RN7SL539P-201ENST00000610974 ERVV-2B6SEH9 535 aa13.99□□□□□ -0.17
RN7SL539P-201ENST00000610974 KIF3CO14782 793 aa13.99□□□□□ -0.17
RN7SL539P-201ENST00000610974 RC3H1Q5TC82 1133 aaKnown RBP13.99□□□□□ -0.17
RN7SL539P-201ENST00000610974 SLC4A9Q96Q91 983 aa13.99□□□□□ -0.17
RN7SL539P-201ENST00000610974 HSP90AB1P08238 724 aaKnown RBP13.98□□□□□ -0.17
RN7SL539P-201ENST00000610974 ADRA2BP18089 450 aa13.98□□□□□ -0.17
RN7SL539P-201ENST00000610974 TNNT2P45379 298 aaPredicted RBP13.98□□□□□ -0.17
RN7SL539P-201ENST00000610974 DCAF5Q96JK2 942 aa13.98□□□□□ -0.17
RN7SL539P-201ENST00000610974 RBM42Q9BTD8 480 aaKnown RBP13.98□□□□□ -0.17
RN7SL539P-201ENST00000610974 TIMELESSQ9UNS1 1208 aa13.98□□□□□ -0.17
RN7SL539P-201ENST00000610974 C10orf71Q711Q0 1435 aa13.98□□□□□ -0.17
RN7SL539P-201ENST00000610974 CNTNAP4Q9C0A0 1308 aa13.97□□□□□ -0.17
RN7SL539P-201ENST00000610974 A0A0G2JLW4 131 aa13.97□□□□□ -0.17
RN7SL539P-201ENST00000610974 ARHGEF1Q92888 912 aaKnown RBP13.97□□□□□ -0.17
RN7SL539P-201ENST00000610974 BCS1LQ9Y276 419 aa13.97□□□□□ -0.17
RN7SL539P-201ENST00000610974 C4AP0C0L4 1744 aa13.96□□□□□ -0.17
RN7SL539P-201ENST00000610974 RPS6KA4O75676 772 aa13.96□□□□□ -0.17
RN7SL539P-201ENST00000610974 GYS1P13807 737 aa13.96□□□□□ -0.17
RN7SL539P-201ENST00000610974 TRIM26Q12899 539 aaPredicted RBP13.96□□□□□ -0.17
RN7SL539P-201ENST00000610974 PLEKHO1Q53GL0 409 aaPredicted RBP13.96□□□□□ -0.17
RN7SL539P-201ENST00000610974 RFC4P35249 363 aa13.95□□□□□ -0.18
RN7SL539P-201ENST00000610974 CABP4P57796 275 aa13.95□□□□□ -0.18
RN7SL539P-201ENST00000610974 AMOTQ4VCS5 1084 aa13.95□□□□□ -0.18
RN7SL539P-201ENST00000610974 POLR3GLQ9BT43 218 aa13.95□□□□□ -0.18
RN7SL539P-201ENST00000610974 CCDC87Q9NVE4 849 aa13.95□□□□□ -0.18
RN7SL539P-201ENST00000610974 KDM6AO15550 1401 aaPredicted RBP13.95□□□□□ -0.18
RN7SL539P-201ENST00000610974 BRCA1P38398 1863 aaKnown RBP13.95□□□□□ -0.18
RN7SL539P-201ENST00000610974 MYH14Q7Z406 1995 aaKnown RBP13.94□□□□□ -0.18
RN7SL539P-201ENST00000610974 DPEP1P16444 411 aa13.94□□□□□ -0.18
RN7SL539P-201ENST00000610974 ZNF530Q6P9A1 599 aaPredicted RBP13.94□□□□□ -0.18
RN7SL539P-201ENST00000610974 ARHGAP27Q6ZUM4 889 aa13.94□□□□□ -0.18
RN7SL539P-201ENST00000610974 PARP3Q9Y6F1 533 aa13.94□□□□□ -0.18
RN7SL539P-201ENST00000610974 TOMM70O94826 608 aa13.93□□□□□ -0.18
RN7SL539P-201ENST00000610974 PTCD1O75127 700 aaKnown RBP13.92□□□□□ -0.18
RN7SL539P-201ENST00000610974 FCHSD2O94868 740 aa13.92□□□□□ -0.18
RN7SL539P-201ENST00000610974 KCNA3P22001 575 aa13.92□□□□□ -0.18
RN7SL539P-201ENST00000610974 MTHFSP49914 203 aa13.92□□□□□ -0.18
RN7SL539P-201ENST00000610974 APLP1P51693 650 aa13.92□□□□□ -0.18
RN7SL539P-201ENST00000610974 ARFGEF1Q9Y6D6 1849 aa13.92□□□□□ -0.18
RN7SL539P-201ENST00000610974 C1orf141Q5JVX7 400 aa13.91□□□□□ -0.18
RN7SL539P-201ENST00000610974 PANK3Q9H999 370 aa13.91□□□□□ -0.18
RN7SL539P-201ENST00000610974 CRKLP46109 303 aaKnown RBP13.9□□□□□ -0.18
RN7SL539P-201ENST00000610974 AEBP1Q8IUX7 1158 aa13.9□□□□□ -0.18
RN7SL539P-201ENST00000610974 NFATC2IPQ8NCF5 419 aa13.9□□□□□ -0.18
RN7SL539P-201ENST00000610974 NMRK2Q9NPI5 230 aa13.9□□□□□ -0.18
RN7SL539P-201ENST00000610974 TJP1Q07157 1748 aa13.9□□□□□ -0.18
RN7SL539P-201ENST00000610974 USP42Q9H9J4 1324 aaKnown RBP13.9□□□□□ -0.19
RN7SL539P-201ENST00000610974 CLSPNQ9HAW4 1339 aa13.9□□□□□ -0.19
RN7SL539P-201ENST00000610974 FKBP8Q14318 412 aa13.89□□□□□ -0.19
RN7SL539P-201ENST00000610974 PIM2Q9P1W9 311 aa13.89□□□□□ -0.19
RN7SL539P-201ENST00000610974 EIF4G2P78344 907 aaKnown RBP eCLIP13.88□□□□□ -0.19
RN7SL539P-201ENST00000610974 C9orf131Q5VYM1 1079 aa13.88□□□□□ -0.19
RN7SL539P-201ENST00000610974 MORC1Q86VD1 984 aa13.88□□□□□ -0.19
RN7SL539P-201ENST00000610974 DNAJC5GQ8N7S2 189 aa13.88□□□□□ -0.19
RN7SL539P-201ENST00000610974 SRP68Q9UHB9 627 aaKnown RBP13.88□□□□□ -0.19
RN7SL539P-201ENST00000610974 SCN11AQ9UI33 1791 aa13.88□□□□□ -0.19
RN7SL539P-201ENST00000610974 DDR1Q08345 913 aa13.87□□□□□ -0.19
RN7SL539P-201ENST00000610974 DALRD3Q5D0E6 543 aaKnown RBP13.87□□□□□ -0.19
RN7SL539P-201ENST00000610974 SULT6B1Q6IMI4 303 aa13.87□□□□□ -0.19
RN7SL539P-201ENST00000610974 INTS5Q6P9B9 1019 aaKnown RBP13.87□□□□□ -0.19
RN7SL539P-201ENST00000610974 ADAMTS7Q9UKP4 1686 aa13.87□□□□□ -0.19
RN7SL539P-201ENST00000610974 HSPA5P11021 654 aaKnown RBP13.86□□□□□ -0.19
RN7SL539P-201ENST00000610974 RBM46Q8TBY0 533 aaKnown RBP13.86□□□□□ -0.19
RN7SL539P-201ENST00000610974 WDR90Q96KV7 1748 aa13.85□□□□□ -0.19
RN7SL539P-201ENST00000610974 TM4SF1P30408 202 aa13.85□□□□□ -0.19
RN7SL539P-201ENST00000610974 IL13P35225 146 aa13.85□□□□□ -0.19
RN7SL539P-201ENST00000610974 C16orf71Q8IYS4 520 aaPredicted RBP13.85□□□□□ -0.19
RN7SL539P-201ENST00000610974 KDM2BQ8NHM5 1336 aa13.85□□□□□ -0.19
RN7SL539P-201ENST00000610974 POLRMTO00411 1230 aaKnown RBP13.84□□□□□ -0.19
RN7SL539P-201ENST00000610974 CHRNA5P30532 468 aa13.84□□□□□ -0.19
RN7SL539P-201ENST00000610974 AKAP4Q5JQC9 854 aa13.84□□□□□ -0.19
RN7SL539P-201ENST00000610974 SLC52A2Q9HAB3 445 aa13.84□□□□□ -0.19
RN7SL539P-201ENST00000610974 RNF181Q9P0P0 153 aa13.84□□□□□ -0.19
RN7SL539P-201ENST00000610974 KCPQ6ZWJ8 1503 aa13.84□□□□□ -0.19
RN7SL539P-201ENST00000610974 SBF1O95248 1867 aa13.83□□□□□ -0.2
RN7SL539P-201ENST00000610974 ZPR1O75312 459 aa13.83□□□□□ -0.2
RN7SL539P-201ENST00000610974 FSTL1Q12841 308 aa13.83□□□□□ -0.2
RN7SL539P-201ENST00000610974 DNAJC10Q8IXB1 793 aa13.83□□□□□ -0.2
RN7SL539P-201ENST00000610974 KNSTRNQ9Y448 316 aa13.83□□□□□ -0.2
RN7SL539P-201ENST00000610974 SOS1Q07889 1333 aaPredicted RBP13.83□□□□□ -0.2
RN7SL539P-201ENST00000610974 USPL1Q5W0Q7 1092 aa13.82□□□□□ -0.2
RN7SL539P-201ENST00000610974 LGR6Q9HBX8 967 aa13.82□□□□□ -0.2
RN7SL539P-201ENST00000610974 TNRC6CQ9HCJ0 1690 aaKnown RBP13.82□□□□□ -0.2
RN7SL539P-201ENST00000610974 MRC1P22897 1456 aa13.81□□□□□ -0.2
RN7SL539P-201ENST00000610974 AFDNP55196 1824 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms