RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 HSPA2P54652 639 aa16.97■□□□□ 0.31
NEK3-205ENST00000610828 C1orf141Q5JVX7 400 aa16.97■□□□□ 0.31
NEK3-205ENST00000610828 MED1Q15648 1581 aaPredicted RBP16.97■□□□□ 0.31
NEK3-205ENST00000610828 CACNA1FO60840 1977 aa16.96■□□□□ 0.31
NEK3-205ENST00000610828 APBB1O00213 710 aa16.96■□□□□ 0.31
NEK3-205ENST00000610828 EIF2S2P20042 333 aaKnown RBP16.96■□□□□ 0.31
NEK3-205ENST00000610828 EIF4A1P60842 406 aaKnown RBP16.96■□□□□ 0.31
NEK3-205ENST00000610828 USP35Q9P2H5 1018 aa16.96■□□□□ 0.31
NEK3-205ENST00000610828 LMO7Q8WWI1 1683 aa16.96■□□□□ 0.31
NEK3-205ENST00000610828 BTBD11A6QL63 1104 aa16.96■□□□□ 0.31
NEK3-205ENST00000610828 HMMRO75330 724 aa16.96■□□□□ 0.31
NEK3-205ENST00000610828 PXDNQ92626 1479 aa16.96■□□□□ 0.3
NEK3-205ENST00000610828 NCAPD2Q15021 1401 aa16.96■□□□□ 0.3
NEK3-205ENST00000610828 ALS2Q96Q42 1657 aa16.95■□□□□ 0.3
NEK3-205ENST00000610828 GNAI2P04899 355 aa16.95■□□□□ 0.3
NEK3-205ENST00000610828 PLEKHM2Q8IWE5 1019 aa16.95■□□□□ 0.3
NEK3-205ENST00000610828 DCCP43146 1447 aa16.95■□□□□ 0.3
NEK3-205ENST00000610828 ERBB3P21860 1342 aa16.95■□□□□ 0.3
NEK3-205ENST00000610828 C16orf71Q8IYS4 520 aaPredicted RBP16.95■□□□□ 0.3
NEK3-205ENST00000610828 RGPD5Q99666 1765 aa16.94■□□□□ 0.3
NEK3-205ENST00000610828 KCNQ3O43525 872 aa16.94■□□□□ 0.3
NEK3-205ENST00000610828 CADPS2Q86UW7 1296 aa16.94■□□□□ 0.3
NEK3-205ENST00000610828 TBC1D2Q9BYX2 928 aa16.94■□□□□ 0.3
NEK3-205ENST00000610828 PHAXQ9H814 394 aaKnown RBP16.94■□□□□ 0.3
NEK3-205ENST00000610828 RNMTO43148 476 aaKnown RBP16.94■□□□□ 0.3
NEK3-205ENST00000610828 SMARCA5O60264 1052 aaPredicted RBP16.94■□□□□ 0.3
NEK3-205ENST00000610828 NFKBIBQ15653 356 aa16.94■□□□□ 0.3
NEK3-205ENST00000610828 KDM3BQ7LBC6 1761 aa16.93■□□□□ 0.3
NEK3-205ENST00000610828 GNAI3P08754 354 aa16.93■□□□□ 0.3
NEK3-205ENST00000610828 NCOA3Q9Y6Q9 1424 aa16.93■□□□□ 0.3
NEK3-205ENST00000610828 GSPT1P15170 499 aaKnown RBP16.93■□□□□ 0.3
NEK3-205ENST00000610828 DEKP35659 375 aaKnown RBP16.93■□□□□ 0.3
NEK3-205ENST00000610828 TBC1D9Q6ZT07 1266 aa16.93■□□□□ 0.3
NEK3-205ENST00000610828 NPHP3Q7Z494 1330 aa16.92■□□□□ 0.3
NEK3-205ENST00000610828 SLKQ9H2G2 1235 aaPredicted RBP16.92■□□□□ 0.3
NEK3-205ENST00000610828 CAMTA1Q9Y6Y1 1673 aa16.92■□□□□ 0.3
NEK3-205ENST00000610828 HOXB7P09629 217 aa16.92■□□□□ 0.3
NEK3-205ENST00000610828 OTUD7AQ8TE49 926 aaPredicted RBP16.92■□□□□ 0.3
NEK3-205ENST00000610828 CHPF2Q9P2E5 772 aa16.92■□□□□ 0.3
NEK3-205ENST00000610828 CABLES1Q8TDN4 633 aa16.91■□□□□ 0.3
NEK3-205ENST00000610828 NLRP2Q9NX02 1062 aa16.91■□□□□ 0.3
NEK3-205ENST00000610828 TTC22Q5TAA0 569 aa16.91■□□□□ 0.3
NEK3-205ENST00000610828 CHMP4AQ9BY43 222 aa16.91■□□□□ 0.3
NEK3-205ENST00000610828 PXDNLA1KZ92 1463 aa16.9■□□□□ 0.3
NEK3-205ENST00000610828 CDC45O75419 566 aa16.9■□□□□ 0.3
NEK3-205ENST00000610828 RBM25P49756 843 aaKnown RBP16.9■□□□□ 0.3
NEK3-205ENST00000610828 RAPGEF4Q8WZA2 1011 aa16.89■□□□□ 0.3
NEK3-205ENST00000610828 OVOS2A0A0G2JMS6 1433 aa16.88■□□□□ 0.29
NEK3-205ENST00000610828 USP44Q9H0E7 712 aa16.88■□□□□ 0.29
NEK3-205ENST00000610828 EXOC6BQ9Y2D4 811 aa16.88■□□□□ 0.29
NEK3-205ENST00000610828 LRRFIP2Q9Y608 721 aaKnown RBP16.88■□□□□ 0.29
NEK3-205ENST00000610828 TNS3Q68CZ2 1445 aa16.88■□□□□ 0.29
NEK3-205ENST00000610828 PNMA6EA0A0J9YXQ4 647 aa16.88■□□□□ 0.29
NEK3-205ENST00000610828 ANXA1P04083 346 aa16.88■□□□□ 0.29
NEK3-205ENST00000610828 UBTFL1P0CB47 393 aaPredicted RBP16.88■□□□□ 0.29
NEK3-205ENST00000610828 N4BP2Q86UW6 1770 aaPredicted RBP16.87■□□□□ 0.29
NEK3-205ENST00000610828 CSB-PGBD3P0DP91 1061 aa16.87■□□□□ 0.29
NEK3-205ENST00000610828 ATP8B2P98198 1209 aa16.87■□□□□ 0.29
NEK3-205ENST00000610828 CHRNA2Q15822 529 aa16.87■□□□□ 0.29
NEK3-205ENST00000610828 SRCIN1Q9C0H9 1055 aa16.87■□□□□ 0.29
NEK3-205ENST00000610828 SPRYD3Q8NCJ5 442 aa16.86■□□□□ 0.29
NEK3-205ENST00000610828 PI4KAP2A4QPH2 592 aa16.86■□□□□ 0.29
NEK3-205ENST00000610828 PI4KAP1Q8N8J0 262 aa16.86■□□□□ 0.29
NEK3-205ENST00000610828 GIGYF1O75420 1035 aaPredicted RBP16.85■□□□□ 0.29
NEK3-205ENST00000610828 FRAT2O75474 233 aaPredicted RBP16.85■□□□□ 0.29
NEK3-205ENST00000610828 TATP17735 454 aaPredicted RBP16.85■□□□□ 0.29
NEK3-205ENST00000610828 DNAAF4Q8WXU2 420 aa16.85■□□□□ 0.29
NEK3-205ENST00000610828 DBF4Q9UBU7 674 aaPredicted RBP16.85■□□□□ 0.29
NEK3-205ENST00000610828 HSCBQ8IWL3 235 aa16.85■□□□□ 0.29
NEK3-205ENST00000610828 SPATA31A3Q5VYP0 1347 aa16.85■□□□□ 0.29
NEK3-205ENST00000610828 SDSP20132 328 aa16.84■□□□□ 0.29
NEK3-205ENST00000610828 LRRCC1Q9C099 1032 aa16.84■□□□□ 0.29
NEK3-205ENST00000610828 ANTXR1Q9H6X2 564 aa16.84■□□□□ 0.29
NEK3-205ENST00000610828 PRAMEF22A3QJZ6 481 aa16.84■□□□□ 0.29
NEK3-205ENST00000610828 SPG7Q9UQ90 795 aa16.83■□□□□ 0.28
NEK3-205ENST00000610828 COL18A1P39060 1754 aa16.83■□□□□ 0.28
NEK3-205ENST00000610828 BEND3Q5T5X7 828 aa16.82■□□□□ 0.28
NEK3-205ENST00000610828 MEGF6O75095 1541 aa16.82■□□□□ 0.28
NEK3-205ENST00000610828 SIPA1L3O60292 1781 aaPredicted RBP16.82■□□□□ 0.28
NEK3-205ENST00000610828 PDE1AP54750 535 aa16.82■□□□□ 0.28
NEK3-205ENST00000610828 BRINP3Q76B58 766 aa16.82■□□□□ 0.28
NEK3-205ENST00000610828 HEG1Q9ULI3 1381 aa16.82■□□□□ 0.28
NEK3-205ENST00000610828 EIF5BO60841 1220 aaKnown RBP16.81■□□□□ 0.28
NEK3-205ENST00000610828 NBPF7P0C2Y1 421 aaPredicted RBP16.81■□□□□ 0.28
NEK3-205ENST00000610828 PHKG2P15735 406 aa16.81■□□□□ 0.28
NEK3-205ENST00000610828 PROSER3Q2NL68 480 aa16.81■□□□□ 0.28
NEK3-205ENST00000610828 CASC1Q6TDU7 716 aa16.81■□□□□ 0.28
NEK3-205ENST00000610828 KIF2CQ99661 725 aa16.81■□□□□ 0.28
NEK3-205ENST00000610828 XIRP1Q702N8 1843 aaKnown RBP16.81■□□□□ 0.28
NEK3-205ENST00000610828 LMTK3Q96Q04 1460 aa16.81■□□□□ 0.28
NEK3-205ENST00000610828 ADCY9O60503 1353 aa16.81■□□□□ 0.28
NEK3-205ENST00000610828 IBTKQ9P2D0 1353 aaPredicted RBP16.81■□□□□ 0.28
NEK3-205ENST00000610828 OSBPL3Q9H4L5 887 aa16.81■□□□□ 0.28
NEK3-205ENST00000610828 CRYBG1Q9Y4K1 1723 aa16.81■□□□□ 0.28
NEK3-205ENST00000610828 ADAMTS7Q9UKP4 1686 aa16.81■□□□□ 0.28
NEK3-205ENST00000610828 SLC39A6Q13433 755 aa16.8■□□□□ 0.28
NEK3-205ENST00000610828 SLC52A2Q9HAB3 445 aa16.8■□□□□ 0.28
NEK3-205ENST00000610828 KDM6AO15550 1401 aaPredicted RBP16.8■□□□□ 0.28
NEK3-205ENST00000610828 TSHZ3Q63HK5 1081 aa16.8■□□□□ 0.28
NEK3-205ENST00000610828 ZNF790Q6PG37 636 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 196.6 ms