RNA–Protein interactions for RNA: ENST00000610493.1

CCL16-204, Transcript of C-C motif chemokine ligand 16, humanhuman

TSL 5

Gene CCL16, Length 1,634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16-204ENST00000610493 TSPY4P0CV99 314 aa11.43□□□□□ -0.58
CCL16-204ENST00000610493 TSPY10P0CW01 314 aa11.43□□□□□ -0.58
CCL16-204ENST00000610493 MRGPRX2Q96LB1 330 aa11.43□□□□□ -0.58
CCL16-204ENST00000610493 C9orf84Q5VXU9 1444 aa11.43□□□□□ -0.58
CCL16-204ENST00000610493 UHRF1BP1Q6BDS2 1440 aa11.43□□□□□ -0.58
CCL16-204ENST00000610493 RAB15P59190 212 aa11.42□□□□□ -0.58
CCL16-204ENST00000610493 CEP126Q9P2H0 1117 aa11.42□□□□□ -0.58
CCL16-204ENST00000610493 C11orf95C9JLR9 678 aaPredicted RBP11.42□□□□□ -0.58
CCL16-204ENST00000610493 PIK3CDO00329 1044 aa11.42□□□□□ -0.58
CCL16-204ENST00000610493 WNT7AO00755 349 aa11.42□□□□□ -0.58
CCL16-204ENST00000610493 ZNF592Q92610 1267 aa11.42□□□□□ -0.58
CCL16-204ENST00000610493 SERPINA10Q9UK55 444 aa11.42□□□□□ -0.58
CCL16-204ENST00000610493 VASH1Q7L8A9 365 aaPredicted RBP11.41□□□□□ -0.58
CCL16-204ENST00000610493 UCN2Q96RP3 112 aa11.41□□□□□ -0.58
CCL16-204ENST00000610493 PRKRIP1Q9H875 184 aaPredicted RBP11.41□□□□□ -0.58
CCL16-204ENST00000610493 TNFRSF10AO00220 468 aa11.4□□□□□ -0.58
CCL16-204ENST00000610493 GIGYF1O75420 1035 aaPredicted RBP11.4□□□□□ -0.58
CCL16-204ENST00000610493 SLFNL1Q499Z3 407 aa11.4□□□□□ -0.58
CCL16-204ENST00000610493 TRMT44Q8IYL2 757 aaKnown RBP11.4□□□□□ -0.58
CCL16-204ENST00000610493 CDC42BPAQ5VT25 1732 aa11.4□□□□□ -0.59
CCL16-204ENST00000610493 NEFLP07196 543 aa11.39□□□□□ -0.59
CCL16-204ENST00000610493 MCCD1P59942 119 aaPredicted RBP11.39□□□□□ -0.59
CCL16-204ENST00000610493 MYT1Q01538 1121 aa11.39□□□□□ -0.59
CCL16-204ENST00000610493 NBPF20Q3BBV1 942 aa11.39□□□□□ -0.59
CCL16-204ENST00000610493 ARHGEF12Q9NZN5 1544 aa11.39□□□□□ -0.59
CCL16-204ENST00000610493 KIF7Q2M1P5 1343 aa11.39□□□□□ -0.59
CCL16-204ENST00000610493 KCTD15Q96SI1 283 aaPredicted RBP11.38□□□□□ -0.59
CCL16-204ENST00000610493 PKD2L1Q9P0L9 805 aa11.38□□□□□ -0.59
CCL16-204ENST00000610493 NUP155O75694 1391 aa11.38□□□□□ -0.59
CCL16-204ENST00000610493 TBC1D9Q6ZT07 1266 aa11.38□□□□□ -0.59
CCL16-204ENST00000610493 RNF135Q8IUD6 432 aa11.38□□□□□ -0.59
CCL16-204ENST00000610493 TFIP11Q9UBB9 837 aaKnown RBP11.38□□□□□ -0.59
CCL16-204ENST00000610493 CCDC141Q6ZP82 1450 aa11.37□□□□□ -0.59
CCL16-204ENST00000610493 KIF15Q9NS87 1388 aa11.37□□□□□ -0.59
CCL16-204ENST00000610493 SIAH2O43255 324 aa11.37□□□□□ -0.59
CCL16-204ENST00000610493 RFX1P22670 979 aa11.37□□□□□ -0.59
CCL16-204ENST00000610493 ERICH6BQ5W0A0 696 aa11.37□□□□□ -0.59
CCL16-204ENST00000610493 PPP1R12CQ9BZL4 782 aa11.37□□□□□ -0.59
CCL16-204ENST00000610493 SHROOM2Q13796 1616 aa11.36□□□□□ -0.59
CCL16-204ENST00000610493 PALM3A6NDB9 673 aaPredicted RBP11.36□□□□□ -0.59
CCL16-204ENST00000610493 SKIP12755 728 aa11.36□□□□□ -0.59
CCL16-204ENST00000610493 FSHRP23945 695 aa11.36□□□□□ -0.59
CCL16-204ENST00000610493 CDV3Q9UKY7 258 aaKnown RBP11.36□□□□□ -0.59
CCL16-204ENST00000610493 RALGAPBQ86X10 1494 aa11.36□□□□□ -0.59
CCL16-204ENST00000610493 ALDH1A1P00352 501 aa11.35□□□□□ -0.59
CCL16-204ENST00000610493 MAST1Q9Y2H9 1570 aa11.35□□□□□ -0.59
CCL16-204ENST00000610493 ROCK2O75116 1388 aaKnown RBP11.35□□□□□ -0.59
CCL16-204ENST00000610493 HNRNPMP52272 730 aaKnown RBP eCLIP11.35□□□□□ -0.59
CCL16-204ENST00000610493 HNRNPUQ00839 825 aaKnown RBP eCLIP11.35□□□□□ -0.59
CCL16-204ENST00000610493 POLR1AO95602 1720 aaPredicted RBP11.34□□□□□ -0.59
CCL16-204ENST00000610493 USP47Q96K76 1375 aa11.34□□□□□ -0.59
CCL16-204ENST00000610493 PLEKHH2Q8IVE3 1493 aa11.34□□□□□ -0.59
CCL16-204ENST00000610493 TSGA10IPQ3SY00 556 aa11.34□□□□□ -0.59
CCL16-204ENST00000610493 CDK15Q96Q40 435 aa11.34□□□□□ -0.59
CCL16-204ENST00000610493 MAP4K5Q9Y4K4 846 aa11.34□□□□□ -0.59
CCL16-204ENST00000610493 PREX2Q70Z35 1606 aa11.33□□□□□ -0.6
CCL16-204ENST00000610493 TTC24A2A3L6 582 aaPredicted RBP11.33□□□□□ -0.6
CCL16-204ENST00000610493 GDF9O60383 454 aa11.33□□□□□ -0.6
CCL16-204ENST00000610493 LMOD1P29536 600 aaPredicted RBP11.33□□□□□ -0.6
CCL16-204ENST00000610493 DEPDC4Q8N2C3 294 aa11.33□□□□□ -0.6
CCL16-204ENST00000610493 SAMD9LQ8IVG5 1584 aa11.33□□□□□ -0.6
CCL16-204ENST00000610493 ATP9BO43861 1147 aa11.32□□□□□ -0.6
CCL16-204ENST00000610493 INTS6LQ5JSJ4 861 aaKnown RBP11.32□□□□□ -0.6
CCL16-204ENST00000610493 CYP4X1Q8N118 509 aa11.32□□□□□ -0.6
CCL16-204ENST00000610493 PHTF2Q8N3S3 785 aa11.32□□□□□ -0.6
CCL16-204ENST00000610493 DHX29Q7Z478 1369 aaKnown RBP11.32□□□□□ -0.6
CCL16-204ENST00000610493 ADH1CP00326 375 aa11.31□□□□□ -0.6
CCL16-204ENST00000610493 GRM5P41594 1212 aa11.31□□□□□ -0.6
CCL16-204ENST00000610493 CFAP70Q5T0N1 1121 aa11.31□□□□□ -0.6
CCL16-204ENST00000610493 TRIM67Q6ZTA4 783 aa11.31□□□□□ -0.6
CCL16-204ENST00000610493 CCDC85AQ96PX6 553 aaPredicted RBP11.31□□□□□ -0.6
CCL16-204ENST00000610493 WASF2Q9Y6W5 498 aa11.31□□□□□ -0.6
CCL16-204ENST00000610493 KDM5CP41229 1560 aa11.31□□□□□ -0.6
CCL16-204ENST00000610493 ZBED9Q6R2W3 1325 aa11.31□□□□□ -0.6
CCL16-204ENST00000610493 ABCC2Q92887 1545 aa11.31□□□□□ -0.6
CCL16-204ENST00000610493 ESPNB1AK53 854 aa11.31□□□□□ -0.6
CCL16-204ENST00000610493 RNF20Q5VTR2 975 aa11.31□□□□□ -0.6
CCL16-204ENST00000610493 PLPP7Q8NBV4 271 aa11.31□□□□□ -0.6
CCL16-204ENST00000610493 SNIP1Q8TAD8 396 aaKnown RBP11.31□□□□□ -0.6
CCL16-204ENST00000610493 PCDHB11Q9Y5F2 797 aa11.31□□□□□ -0.6
CCL16-204ENST00000610493 UHRF1BP1LA0JNW5 1464 aa11.3□□□□□ -0.6
CCL16-204ENST00000610493 USP17L5A8MUK1 530 aa11.3□□□□□ -0.6
CCL16-204ENST00000610493 J3QL48 77 aa11.3□□□□□ -0.6
CCL16-204ENST00000610493 CCDC184Q52MB2 194 aa11.3□□□□□ -0.6
CCL16-204ENST00000610493 MRS2Q9HD23 443 aa11.3□□□□□ -0.6
CCL16-204ENST00000610493 DOLKQ9UPQ8 538 aa11.3□□□□□ -0.6
CCL16-204ENST00000610493 MAFBQ9Y5Q3 323 aaPredicted RBP11.3□□□□□ -0.6
CCL16-204ENST00000610493 KTN1Q86UP2 1357 aaKnown RBP11.29□□□□□ -0.6
CCL16-204ENST00000610493 CDC42BPBQ9Y5S2 1711 aa11.29□□□□□ -0.6
CCL16-204ENST00000610493 OXLD1Q5BKU9 147 aa11.29□□□□□ -0.6
CCL16-204ENST00000610493 MPNDQ8N594 471 aa11.29□□□□□ -0.6
CCL16-204ENST00000610493 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.29□□□□□ -0.6
CCL16-204ENST00000610493 FAM135AQ9P2D6 1515 aa11.29□□□□□ -0.6
CCL16-204ENST00000610493 USP17L3A6NCW0 530 aa11.28□□□□□ -0.6
CCL16-204ENST00000610493 USP17L4A6NCW7 530 aa11.28□□□□□ -0.6
CCL16-204ENST00000610493 ERVH48-1M5A8F1 160 aa11.28□□□□□ -0.6
CCL16-204ENST00000610493 CDCA8Q53HL2 280 aa11.28□□□□□ -0.6
CCL16-204ENST00000610493 USP17L2Q6R6M4 530 aa11.28□□□□□ -0.6
CCL16-204ENST00000610493 USP17L1Q7RTZ2 530 aa11.28□□□□□ -0.6
CCL16-204ENST00000610493 NFATC2IPQ8NCF5 419 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms