RNA–Protein interactions for RNA: ENST00000610041.5

PNLDC1-205, Transcript of PARN like, ribonuclease domain containing 1, humanhuman

TSL 3

Gene PNLDC1, Length 965 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNLDC1-205ENST00000610041 U2AF1Q01081 240 aaKnown RBP eCLIP23.15■■□□□ 1.3
PNLDC1-205ENST00000610041 LINC00116Q8NCU8 138 aa23.15■■□□□ 1.3
PNLDC1-205ENST00000610041 LGR6Q9HBX8 967 aa23.15■■□□□ 1.3
PNLDC1-205ENST00000610041 PTGER2P43116 358 aa23.14■■□□□ 1.29
PNLDC1-205ENST00000610041 ITPK1Q13572 414 aa23.14■■□□□ 1.29
PNLDC1-205ENST00000610041 MTFR1LQ9H019 292 aa23.14■■□□□ 1.29
PNLDC1-205ENST00000610041 NUDCQ9Y266 331 aa23.14■■□□□ 1.29
PNLDC1-205ENST00000610041 MAP3K5Q99683 1374 aa23.14■■□□□ 1.29
PNLDC1-205ENST00000610041 NFATC2IPQ8NCF5 419 aa23.13■■□□□ 1.29
PNLDC1-205ENST00000610041 RNMTO43148 476 aaKnown RBP23.12■■□□□ 1.29
PNLDC1-205ENST00000610041 AMIGO3Q86WK7 504 aa23.12■■□□□ 1.29
PNLDC1-205ENST00000610041 PHACTR3Q96KR7 559 aa23.12■■□□□ 1.29
PNLDC1-205ENST00000610041 SLC4A9Q96Q91 983 aa23.12■■□□□ 1.29
PNLDC1-205ENST00000610041 RBM42Q9BTD8 480 aaKnown RBP23.12■■□□□ 1.29
PNLDC1-205ENST00000610041 PPP1R1BQ9UD71 204 aaPredicted RBP23.12■■□□□ 1.29
PNLDC1-205ENST00000610041 ATP6V1AP38606 617 aa23.11■■□□□ 1.29
PNLDC1-205ENST00000610041 SMIM5Q71RC9 77 aa23.11■■□□□ 1.29
PNLDC1-205ENST00000610041 SLC52A2Q9HAB3 445 aa23.11■■□□□ 1.29
PNLDC1-205ENST00000610041 UBR3Q6ZT12 1888 aa23.11■■□□□ 1.29
PNLDC1-205ENST00000610041 GAS2L2Q8NHY3 880 aa23.1■■□□□ 1.29
PNLDC1-205ENST00000610041 AK7Q96M32 723 aa23.1■■□□□ 1.29
PNLDC1-205ENST00000610041 ZNF831Q5JPB2 1677 aa23.09■■□□□ 1.29
PNLDC1-205ENST00000610041 COL5A3P25940 1745 aaPredicted RBP23.09■■□□□ 1.29
PNLDC1-205ENST00000610041 TJP1Q07157 1748 aa23.09■■□□□ 1.29
PNLDC1-205ENST00000610041 RALBP1Q15311 655 aa23.09■■□□□ 1.29
PNLDC1-205ENST00000610041 COL23A1Q86Y22 540 aaPredicted RBP23.09■■□□□ 1.29
PNLDC1-205ENST00000610041 SGIP1Q9BQI5 828 aa23.09■■□□□ 1.29
PNLDC1-205ENST00000610041 MSH5O43196 834 aa23.08■■□□□ 1.29
PNLDC1-205ENST00000610041 PTCD1O75127 700 aaKnown RBP23.08■■□□□ 1.29
PNLDC1-205ENST00000610041 PHF14O94880 888 aa23.08■■□□□ 1.29
PNLDC1-205ENST00000610041 KCPQ6ZWJ8 1503 aa23.07■■□□□ 1.28
PNLDC1-205ENST00000610041 COL24A1Q17RW2 1714 aa23.06■■□□□ 1.28
PNLDC1-205ENST00000610041 CICQ96RK0 1608 aaPredicted RBP23.06■■□□□ 1.28
PNLDC1-205ENST00000610041 MYBBP1AQ9BQG0 1328 aaKnown RBP23.06■■□□□ 1.28
PNLDC1-205ENST00000610041 GNAT3A8MTJ3 354 aa23.05■■□□□ 1.28
PNLDC1-205ENST00000610041 GNPATO15228 680 aa23.05■■□□□ 1.28
PNLDC1-205ENST00000610041 FCHSD2O94868 740 aa23.05■■□□□ 1.28
PNLDC1-205ENST00000610041 SLC39A6Q13433 755 aa23.05■■□□□ 1.28
PNLDC1-205ENST00000610041 MSL1Q68DK7 614 aa23.05■■□□□ 1.28
PNLDC1-205ENST00000610041 SIPA1L3O60292 1781 aaPredicted RBP23.04■■□□□ 1.28
PNLDC1-205ENST00000610041 IL17REQ8NFR9 667 aa23.04■■□□□ 1.28
PNLDC1-205ENST00000610041 SLC16A10Q8TF71 515 aa23.03■■□□□ 1.28
PNLDC1-205ENST00000610041 UBR2Q8IWV8 1755 aa23.02■■□□□ 1.28
PNLDC1-205ENST00000610041 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.02■■□□□ 1.28
PNLDC1-205ENST00000610041 CEMIPQ8WUJ3 1361 aa23.01■■□□□ 1.27
PNLDC1-205ENST00000610041 HMGB2P26583 209 aaKnown RBP23■■□□□ 1.27
PNLDC1-205ENST00000610041 CNTNAP4Q9C0A0 1308 aa23■■□□□ 1.27
PNLDC1-205ENST00000610041 SSFA2P28290 1259 aa22.99■■□□□ 1.27
PNLDC1-205ENST00000610041 TEFQ10587 303 aa22.99■■□□□ 1.27
PNLDC1-205ENST00000610041 FLAD1Q8NFF5 587 aa22.99■■□□□ 1.27
PNLDC1-205ENST00000610041 ARXQ96QS3 562 aa22.99■■□□□ 1.27
PNLDC1-205ENST00000610041 FHDC1Q9C0D6 1143 aaPredicted RBP22.99■■□□□ 1.27
PNLDC1-205ENST00000610041 MCM10Q7L590 875 aa22.98■■□□□ 1.27
PNLDC1-205ENST00000610041 PLEKHF1Q96S99 279 aa22.98■■□□□ 1.27
PNLDC1-205ENST00000610041 PRKRIP1Q9H875 184 aaPredicted RBP22.98■■□□□ 1.27
PNLDC1-205ENST00000610041 MYH14Q7Z406 1995 aaKnown RBP22.98■■□□□ 1.27
PNLDC1-205ENST00000610041 C4AP0C0L4 1744 aa22.97■■□□□ 1.27
PNLDC1-205ENST00000610041 POLD1P28340 1107 aa22.97■■□□□ 1.27
PNLDC1-205ENST00000610041 CRKLP46109 303 aaKnown RBP22.97■■□□□ 1.27
PNLDC1-205ENST00000610041 DCTN1Q14203 1278 aa22.97■■□□□ 1.27
PNLDC1-205ENST00000610041 DNAJC10Q8IXB1 793 aa22.97■■□□□ 1.27
PNLDC1-205ENST00000610041 ZNF316A6NFI3 1004 aaPredicted RBP22.95■■□□□ 1.26
PNLDC1-205ENST00000610041 KLHL34Q8N239 644 aa22.95■■□□□ 1.26
PNLDC1-205ENST00000610041 DLG5Q8TDM6 1919 aa22.94■■□□□ 1.26
PNLDC1-205ENST00000610041 TTC5Q8N0Z6 440 aa22.94■■□□□ 1.26
PNLDC1-205ENST00000610041 RTF1Q92541 710 aaKnown RBP22.94■■□□□ 1.26
PNLDC1-205ENST00000610041 RTCBQ9Y3I0 505 aaKnown RBP22.94■■□□□ 1.26
PNLDC1-205ENST00000610041 RC3H1Q5TC82 1133 aaKnown RBP22.93■■□□□ 1.26
PNLDC1-205ENST00000610041 MAPK8IP3Q9UPT6 1336 aa22.92■■□□□ 1.26
PNLDC1-205ENST00000610041 NEFMP07197 916 aa22.92■■□□□ 1.26
PNLDC1-205ENST00000610041 ZNF790Q6PG37 636 aa22.92■■□□□ 1.26
PNLDC1-205ENST00000610041 ZNF496Q96IT1 587 aaPredicted RBP22.92■■□□□ 1.26
PNLDC1-205ENST00000610041 SYT17Q9BSW7 474 aa22.92■■□□□ 1.26
PNLDC1-205ENST00000610041 KCNQ3O43525 872 aa22.91■■□□□ 1.26
PNLDC1-205ENST00000610041 RPS6KA4O75676 772 aa22.91■■□□□ 1.26
PNLDC1-205ENST00000610041 NFE2L2Q16236 605 aa22.9■■□□□ 1.26
PNLDC1-205ENST00000610041 INTS5Q6P9B9 1019 aaKnown RBP22.9■■□□□ 1.26
PNLDC1-205ENST00000610041 ARHGEF1Q92888 912 aaKnown RBP22.9■■□□□ 1.26
PNLDC1-205ENST00000610041 HEG1Q9ULI3 1381 aa22.89■■□□□ 1.26
PNLDC1-205ENST00000610041 BTBD11A6QL63 1104 aa22.89■■□□□ 1.25
PNLDC1-205ENST00000610041 CYP19A1P11511 503 aaPredicted RBP22.89■■□□□ 1.25
PNLDC1-205ENST00000610041 TRAPPC3LQ5T215 181 aa22.89■■□□□ 1.25
PNLDC1-205ENST00000610041 THUMPD2Q9BTF0 503 aaKnown RBP22.89■■□□□ 1.25
PNLDC1-205ENST00000610041 CCDC87Q9NVE4 849 aa22.89■■□□□ 1.25
PNLDC1-205ENST00000610041 ADRA2BP18089 450 aa22.88■■□□□ 1.25
PNLDC1-205ENST00000610041 CCDC146Q8IYE0 955 aa22.88■■□□□ 1.25
PNLDC1-205ENST00000610041 ZBTB1Q9Y2K1 713 aa22.88■■□□□ 1.25
PNLDC1-205ENST00000610041 HTATSF1O43719 755 aaKnown RBP22.87■■□□□ 1.25
PNLDC1-205ENST00000610041 VSIG10Q8N0Z9 540 aa22.87■■□□□ 1.25
PNLDC1-205ENST00000610041 SOS1Q07889 1333 aaPredicted RBP22.86■■□□□ 1.25
PNLDC1-205ENST00000610041 WDR43Q15061 677 aaKnown RBP eCLIP22.86■■□□□ 1.25
PNLDC1-205ENST00000610041 NLGN2Q8NFZ4 835 aa22.86■■□□□ 1.25
PNLDC1-205ENST00000610041 SRP68Q9UHB9 627 aaKnown RBP22.86■■□□□ 1.25
PNLDC1-205ENST00000610041 RFC4P35249 363 aa22.85■■□□□ 1.25
PNLDC1-205ENST00000610041 FMNL2Q96PY5 1086 aa22.85■■□□□ 1.25
PNLDC1-205ENST00000610041 PNNQ9H307 717 aaKnown RBP22.85■■□□□ 1.25
PNLDC1-205ENST00000610041 COL15A1P39059 1388 aa22.84■■□□□ 1.25
PNLDC1-205ENST00000610041 USP42Q9H9J4 1324 aaKnown RBP22.83■■□□□ 1.25
PNLDC1-205ENST00000610041 GYS1P13807 737 aa22.83■■□□□ 1.25
PNLDC1-205ENST00000610041 MIS18AQ9NYP9 233 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms