RNA–Protein interactions for RNA: ENST00000609081.1

LMBR1-220, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-220ENST00000609081 U2SURPO15042 1029 aaKnown RBP20.27■□□□□ 0.84
LMBR1-220ENST00000609081 PPP2R1AP30153 589 aa20.27■□□□□ 0.84
LMBR1-220ENST00000609081 DCAF8L1A6NGE4 600 aa20.26■□□□□ 0.83
LMBR1-220ENST00000609081 POLD1P28340 1107 aa20.26■□□□□ 0.83
LMBR1-220ENST00000609081 UBR3Q6ZT12 1888 aa20.25■□□□□ 0.83
LMBR1-220ENST00000609081 ATP6V1AP38606 617 aa20.25■□□□□ 0.83
LMBR1-220ENST00000609081 ARXQ96QS3 562 aa20.25■□□□□ 0.83
LMBR1-220ENST00000609081 VIRMAQ69YN4 1812 aaKnown RBP20.25■□□□□ 0.83
LMBR1-220ENST00000609081 MAP3K5Q99683 1374 aa20.24■□□□□ 0.83
LMBR1-220ENST00000609081 ADAMTS7Q9UKP4 1686 aa20.24■□□□□ 0.83
LMBR1-220ENST00000609081 COL23A1Q86Y22 540 aaPredicted RBP20.24■□□□□ 0.83
LMBR1-220ENST00000609081 POTEDQ86YR6 584 aa20.24■□□□□ 0.83
LMBR1-220ENST00000609081 NFATC2IPQ8NCF5 419 aa20.24■□□□□ 0.83
LMBR1-220ENST00000609081 GAS2L2Q8NHY3 880 aa20.24■□□□□ 0.83
LMBR1-220ENST00000609081 MRC1P22897 1456 aa20.24■□□□□ 0.83
LMBR1-220ENST00000609081 MSH5O43196 834 aa20.23■□□□□ 0.83
LMBR1-220ENST00000609081 SSFA2P28290 1259 aa20.23■□□□□ 0.83
LMBR1-220ENST00000609081 MTHFSDQ2M296 383 aaKnown RBP20.23■□□□□ 0.83
LMBR1-220ENST00000609081 SLC52A2Q9HAB3 445 aa20.22■□□□□ 0.83
LMBR1-220ENST00000609081 RNMTO43148 476 aaKnown RBP20.21■□□□□ 0.83
LMBR1-220ENST00000609081 ZEB1P37275 1124 aaPredicted RBP20.21■□□□□ 0.83
LMBR1-220ENST00000609081 LINC00116Q8NCU8 138 aa20.21■□□□□ 0.83
LMBR1-220ENST00000609081 RBM42Q9BTD8 480 aaKnown RBP20.21■□□□□ 0.83
LMBR1-220ENST00000609081 CICQ96RK0 1608 aaPredicted RBP20.2■□□□□ 0.82
LMBR1-220ENST00000609081 ITPK1Q13572 414 aa20.2■□□□□ 0.82
LMBR1-220ENST00000609081 RC3H1Q5TC82 1133 aaKnown RBP20.2■□□□□ 0.82
LMBR1-220ENST00000609081 FHDC1Q9C0D6 1143 aaPredicted RBP20.2■□□□□ 0.82
LMBR1-220ENST00000609081 COL5A3P25940 1745 aaPredicted RBP20.19■□□□□ 0.82
LMBR1-220ENST00000609081 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.19■□□□□ 0.82
LMBR1-220ENST00000609081 FCHSD2O94868 740 aa20.19■□□□□ 0.82
LMBR1-220ENST00000609081 SYT17Q9BSW7 474 aa20.19■□□□□ 0.82
LMBR1-220ENST00000609081 GNAT3A8MTJ3 354 aa20.18■□□□□ 0.82
LMBR1-220ENST00000609081 U2AF1L5P0DN76 240 aaPredicted RBP20.18■□□□□ 0.82
LMBR1-220ENST00000609081 U2AF1Q01081 240 aaKnown RBP eCLIP20.18■□□□□ 0.82
LMBR1-220ENST00000609081 RSPH6AQ9H0K4 717 aa20.18■□□□□ 0.82
LMBR1-220ENST00000609081 CNTNAP4Q9C0A0 1308 aa20.18■□□□□ 0.82
LMBR1-220ENST00000609081 GNPATO15228 680 aa20.17■□□□□ 0.82
LMBR1-220ENST00000609081 ADRA2BP18089 450 aa20.17■□□□□ 0.82
LMBR1-220ENST00000609081 RALBP1Q15311 655 aa20.17■□□□□ 0.82
LMBR1-220ENST00000609081 LGR6Q9HBX8 967 aa20.17■□□□□ 0.82
LMBR1-220ENST00000609081 PRKAR2BP31323 418 aa20.16■□□□□ 0.82
LMBR1-220ENST00000609081 SLC4A9Q96Q91 983 aa20.16■□□□□ 0.82
LMBR1-220ENST00000609081 RTCBQ9Y3I0 505 aaKnown RBP20.16■□□□□ 0.82
LMBR1-220ENST00000609081 PTCD1O75127 700 aaKnown RBP20.15■□□□□ 0.82
LMBR1-220ENST00000609081 PHF14O94880 888 aa20.14■□□□□ 0.81
LMBR1-220ENST00000609081 RPS6KA4O75676 772 aa20.13■□□□□ 0.81
LMBR1-220ENST00000609081 NEFMP07197 916 aa20.13■□□□□ 0.81
LMBR1-220ENST00000609081 TEFQ10587 303 aa20.13■□□□□ 0.81
LMBR1-220ENST00000609081 VSIG10Q8N0Z9 540 aa20.13■□□□□ 0.81
LMBR1-220ENST00000609081 DDX10Q13206 875 aaKnown RBP20.12■□□□□ 0.81
LMBR1-220ENST00000609081 TRAPPC3LQ5T215 181 aa20.12■□□□□ 0.81
LMBR1-220ENST00000609081 PNNQ9H307 717 aaKnown RBP20.12■□□□□ 0.81
LMBR1-220ENST00000609081 TJP1Q07157 1748 aa20.12■□□□□ 0.81
LMBR1-220ENST00000609081 MYH14Q7Z406 1995 aaKnown RBP20.12■□□□□ 0.81
LMBR1-220ENST00000609081 UBR2Q8IWV8 1755 aa20.11■□□□□ 0.81
LMBR1-220ENST00000609081 CEMIPQ8WUJ3 1361 aa20.11■□□□□ 0.81
LMBR1-220ENST00000609081 AMIGO3Q86WK7 504 aa20.11■□□□□ 0.81
LMBR1-220ENST00000609081 PHACTR3Q96KR7 559 aa20.11■□□□□ 0.81
LMBR1-220ENST00000609081 SIPA1L3O60292 1781 aaPredicted RBP20.11■□□□□ 0.81
LMBR1-220ENST00000609081 HTATSF1O43719 755 aaKnown RBP20.1■□□□□ 0.81
LMBR1-220ENST00000609081 MSL1Q68DK7 614 aa20.1■□□□□ 0.81
LMBR1-220ENST00000609081 TTC5Q8N0Z6 440 aa20.1■□□□□ 0.81
LMBR1-220ENST00000609081 IL17REQ8NFR9 667 aa20.1■□□□□ 0.81
LMBR1-220ENST00000609081 KCPQ6ZWJ8 1503 aa20.09■□□□□ 0.81
LMBR1-220ENST00000609081 CRKLP46109 303 aaKnown RBP20.09■□□□□ 0.81
LMBR1-220ENST00000609081 RTF1Q92541 710 aaKnown RBP20.09■□□□□ 0.81
LMBR1-220ENST00000609081 CD2APQ9Y5K6 639 aa20.09■□□□□ 0.81
LMBR1-220ENST00000609081 RFC4P35249 363 aa20.08■□□□□ 0.81
LMBR1-220ENST00000609081 NLGN1Q8N2Q7 840 aa20.08■□□□□ 0.81
LMBR1-220ENST00000609081 SLC39A6Q13433 755 aa20.07■□□□□ 0.8
LMBR1-220ENST00000609081 KLHL34Q8N239 644 aa20.07■□□□□ 0.8
LMBR1-220ENST00000609081 MYBBP1AQ9BQG0 1328 aaKnown RBP20.06■□□□□ 0.8
LMBR1-220ENST00000609081 ZNF790Q6PG37 636 aa20.06■□□□□ 0.8
LMBR1-220ENST00000609081 ARHGEF1Q92888 912 aaKnown RBP20.06■□□□□ 0.8
LMBR1-220ENST00000609081 TEX13AQ9BXU3 409 aaPredicted RBP20.06■□□□□ 0.8
LMBR1-220ENST00000609081 C4AP0C0L4 1744 aa20.05■□□□□ 0.8
LMBR1-220ENST00000609081 DNAJC10Q8IXB1 793 aa20.05■□□□□ 0.8
LMBR1-220ENST00000609081 CCDC87Q9NVE4 849 aa20.05■□□□□ 0.8
LMBR1-220ENST00000609081 STARD3NLO95772 234 aa20.04■□□□□ 0.8
LMBR1-220ENST00000609081 CYP19A1P11511 503 aaPredicted RBP20.04■□□□□ 0.8
LMBR1-220ENST00000609081 INTS5Q6P9B9 1019 aaKnown RBP20.04■□□□□ 0.8
LMBR1-220ENST00000609081 SMIM5Q71RC9 77 aa20.03■□□□□ 0.8
LMBR1-220ENST00000609081 BTBD11A6QL63 1104 aa20.02■□□□□ 0.8
LMBR1-220ENST00000609081 FMNL2Q96PY5 1086 aa20.02■□□□□ 0.8
LMBR1-220ENST00000609081 HEG1Q9ULI3 1381 aa20.02■□□□□ 0.8
LMBR1-220ENST00000609081 MAPK8IP3Q9UPT6 1336 aa20.02■□□□□ 0.79
LMBR1-220ENST00000609081 GYS1P13807 737 aa20.01■□□□□ 0.79
LMBR1-220ENST00000609081 PLEKHF1Q96S99 279 aa20.01■□□□□ 0.79
LMBR1-220ENST00000609081 CHD4Q14839 1912 aa20.01■□□□□ 0.79
LMBR1-220ENST00000609081 SOS1Q07889 1333 aaPredicted RBP20.01■□□□□ 0.79
LMBR1-220ENST00000609081 USP42Q9H9J4 1324 aaKnown RBP20.01■□□□□ 0.79
LMBR1-220ENST00000609081 DLG5Q8TDM6 1919 aa20■□□□□ 0.79
LMBR1-220ENST00000609081 MMP10P09238 476 aa20■□□□□ 0.79
LMBR1-220ENST00000609081 GPR162Q16538 588 aa20■□□□□ 0.79
LMBR1-220ENST00000609081 ZNF496Q96IT1 587 aaPredicted RBP20■□□□□ 0.79
LMBR1-220ENST00000609081 UTRNP46939 3433 aa20■□□□□ 0.79
LMBR1-220ENST00000609081 YY1P25490 414 aa19.99■□□□□ 0.79
LMBR1-220ENST00000609081 NLGN2Q8NFZ4 835 aa19.99■□□□□ 0.79
LMBR1-220ENST00000609081 KIF13BQ9NQT8 1826 aa19.98■□□□□ 0.79
LMBR1-220ENST00000609081 ZPR1O75312 459 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms