RNA–Protein interactions for RNA: ENST00000608426.1

LINC00343-211, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 709 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-211ENST00000608426 TLR1Q15399 786 aa11.61□□□□□ -0.55
LINC00343-211ENST00000608426 RBM19Q9Y4C8 960 aaKnown RBP11.61□□□□□ -0.55
LINC00343-211ENST00000608426 WASLO00401 505 aaPredicted RBP11.6□□□□□ -0.55
LINC00343-211ENST00000608426 CRTC2Q53ET0 693 aaPredicted RBP11.6□□□□□ -0.55
LINC00343-211ENST00000608426 ZSCAN10Q96SZ4 725 aaPredicted RBP11.6□□□□□ -0.55
LINC00343-211ENST00000608426 ZNF358Q9NW07 568 aa11.6□□□□□ -0.55
LINC00343-211ENST00000608426 HRH3Q9Y5N1 445 aa11.6□□□□□ -0.55
LINC00343-211ENST00000608426 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.59□□□□□ -0.55
LINC00343-211ENST00000608426 USP17L15C9J2P7 530 aa11.59□□□□□ -0.55
LINC00343-211ENST00000608426 USP17L10C9JJH3 530 aa11.59□□□□□ -0.55
LINC00343-211ENST00000608426 USP17L13C9JLJ4 530 aa11.59□□□□□ -0.55
LINC00343-211ENST00000608426 USP17L12C9JPN9 530 aa11.59□□□□□ -0.55
LINC00343-211ENST00000608426 USP17L11C9JVI0 530 aa11.59□□□□□ -0.55
LINC00343-211ENST00000608426 USP17L21D6R901 530 aa11.59□□□□□ -0.55
LINC00343-211ENST00000608426 USP17L18D6R9N7 530 aa11.59□□□□□ -0.55
LINC00343-211ENST00000608426 USP17L22D6RA61 530 aa11.59□□□□□ -0.55
LINC00343-211ENST00000608426 USP17L17D6RBQ6 530 aa11.59□□□□□ -0.55
LINC00343-211ENST00000608426 USP17L19D6RCP7 530 aa11.59□□□□□ -0.55
LINC00343-211ENST00000608426 USP17L20D6RJB6 530 aa11.59□□□□□ -0.55
LINC00343-211ENST00000608426 GTF2E1P29083 439 aaPredicted RBP11.59□□□□□ -0.55
LINC00343-211ENST00000608426 USP17L24Q0WX57 530 aa11.59□□□□□ -0.55
LINC00343-211ENST00000608426 GRIP2Q9C0E4 1043 aa11.59□□□□□ -0.55
LINC00343-211ENST00000608426 BACH1O14867 736 aa11.58□□□□□ -0.56
LINC00343-211ENST00000608426 RHOQP17081 205 aa11.58□□□□□ -0.56
LINC00343-211ENST00000608426 TMEM214Q6NUQ4 689 aaKnown RBP11.58□□□□□ -0.56
LINC00343-211ENST00000608426 ARID3AQ99856 593 aa11.58□□□□□ -0.56
LINC00343-211ENST00000608426 FAM196BA6NMK8 535 aa11.57□□□□□ -0.56
LINC00343-211ENST00000608426 SMTNP53814 917 aa11.57□□□□□ -0.56
LINC00343-211ENST00000608426 PTK7Q13308 1070 aa11.57□□□□□ -0.56
LINC00343-211ENST00000608426 SIX5Q8N196 739 aa11.57□□□□□ -0.56
LINC00343-211ENST00000608426 FHDC1Q9C0D6 1143 aaPredicted RBP11.57□□□□□ -0.56
LINC00343-211ENST00000608426 POU4F2Q12837 409 aa11.56□□□□□ -0.56
LINC00343-211ENST00000608426 SFI1A8K8P3 1242 aa11.55□□□□□ -0.56
LINC00343-211ENST00000608426 PTSQ03393 145 aa11.55□□□□□ -0.56
LINC00343-211ENST00000608426 SLC4A9Q96Q91 983 aa11.55□□□□□ -0.56
LINC00343-211ENST00000608426 A6NJY4 79 aa11.54□□□□□ -0.56
LINC00343-211ENST00000608426 DPYDQ12882 1025 aa11.54□□□□□ -0.56
LINC00343-211ENST00000608426 GNASQ5JWF2 1037 aa11.54□□□□□ -0.56
LINC00343-211ENST00000608426 ANKMY2Q8IV38 441 aa11.54□□□□□ -0.56
LINC00343-211ENST00000608426 PBXIP1Q96AQ6 731 aa11.54□□□□□ -0.56
LINC00343-211ENST00000608426 SPATA31C2B4DYI2 1134 aa11.53□□□□□ -0.56
LINC00343-211ENST00000608426 DKK1O94907 266 aa11.53□□□□□ -0.56
LINC00343-211ENST00000608426 SEC13P55735 322 aa11.53□□□□□ -0.56
LINC00343-211ENST00000608426 NBPF10Q6P3W6 841 aaKnown RBP11.53□□□□□ -0.56
LINC00343-211ENST00000608426 TAS1R3Q7RTX0 852 aa11.53□□□□□ -0.56
LINC00343-211ENST00000608426 TNS4Q8IZW8 715 aa11.53□□□□□ -0.56
LINC00343-211ENST00000608426 NBPF15Q8N660 670 aa11.53□□□□□ -0.56
LINC00343-211ENST00000608426 PHKA2P46019 1235 aa11.52□□□□□ -0.57
LINC00343-211ENST00000608426 SRPK2P78362 688 aaKnown RBP11.52□□□□□ -0.57
LINC00343-211ENST00000608426 PPARGC1BQ86YN6 1023 aaKnown RBP11.52□□□□□ -0.57
LINC00343-211ENST00000608426 NXF1Q9UBU9 619 aaKnown RBP11.52□□□□□ -0.57
LINC00343-211ENST00000608426 MTFR1Q15390 333 aa11.51□□□□□ -0.57
LINC00343-211ENST00000608426 TSEN2Q8NCE0 465 aaKnown RBP11.51□□□□□ -0.57
LINC00343-211ENST00000608426 RHBDD1Q8TEB9 315 aa11.51□□□□□ -0.57
LINC00343-211ENST00000608426 NOVA2Q9UNW9 492 aaKnown RBP11.51□□□□□ -0.57
LINC00343-211ENST00000608426 VEGFBP49765 207 aa11.5□□□□□ -0.57
LINC00343-211ENST00000608426 C4orf17Q53FE4 359 aa11.5□□□□□ -0.57
LINC00343-211ENST00000608426 CCDC155Q8N6L0 562 aa11.5□□□□□ -0.57
LINC00343-211ENST00000608426 FAM200AQ8TCP9 573 aa11.5□□□□□ -0.57
LINC00343-211ENST00000608426 ZNF775Q96BV0 537 aaPredicted RBP11.5□□□□□ -0.57
LINC00343-211ENST00000608426 TIMMDC1Q9NPL8 285 aa11.5□□□□□ -0.57
LINC00343-211ENST00000608426 SENP3-EIF4A1A0A087X0R7 540 aa11.49□□□□□ -0.57
LINC00343-211ENST00000608426 SLC35F4A4IF30 521 aa11.49□□□□□ -0.57
LINC00343-211ENST00000608426 M0R2N6 131 aa11.49□□□□□ -0.57
LINC00343-211ENST00000608426 CDK2AP1O14519 115 aa11.49□□□□□ -0.57
LINC00343-211ENST00000608426 ARXQ96QS3 562 aa11.49□□□□□ -0.57
LINC00343-211ENST00000608426 HINFPQ9BQA5 517 aa11.49□□□□□ -0.57
LINC00343-211ENST00000608426 SCHIP1Q9P0W5 487 aaPredicted RBP11.49□□□□□ -0.57
LINC00343-211ENST00000608426 USP3Q9Y6I4 520 aa11.49□□□□□ -0.57
LINC00343-211ENST00000608426 TERTO14746 1132 aaKnown RBP11.48□□□□□ -0.57
LINC00343-211ENST00000608426 EPHA4P54764 986 aa11.48□□□□□ -0.57
LINC00343-211ENST00000608426 TBCELQ5QJ74 424 aa11.48□□□□□ -0.57
LINC00343-211ENST00000608426 NIFKQ9BYG3 293 aaKnown RBP11.48□□□□□ -0.57
LINC00343-211ENST00000608426 CABP1Q9NZU7 370 aa11.48□□□□□ -0.57
LINC00343-211ENST00000608426 PPFIA3O75145 1194 aa11.47□□□□□ -0.57
LINC00343-211ENST00000608426 ATG7O95352 703 aa11.47□□□□□ -0.57
LINC00343-211ENST00000608426 PLA2G4AP47712 749 aa11.47□□□□□ -0.57
LINC00343-211ENST00000608426 WDR44Q5JSH3 913 aa11.47□□□□□ -0.57
LINC00343-211ENST00000608426 SLC9A9Q8IVB4 645 aa11.47□□□□□ -0.57
LINC00343-211ENST00000608426 IQSEC3Q9UPP2 1182 aaPredicted RBP11.47□□□□□ -0.57
LINC00343-211ENST00000608426 LGR5O75473 907 aa11.46□□□□□ -0.57
LINC00343-211ENST00000608426 GAS2L1Q99501 681 aaPredicted RBP11.46□□□□□ -0.57
LINC00343-211ENST00000608426 TSPAN10Q9H1Z9 355 aaPredicted RBP11.46□□□□□ -0.57
LINC00343-211ENST00000608426 ZMIZ1Q9ULJ6 1067 aa11.46□□□□□ -0.57
LINC00343-211ENST00000608426 PPP1R15AO75807 674 aaPredicted RBP11.45□□□□□ -0.58
LINC00343-211ENST00000608426 FOXK2Q01167 660 aa11.45□□□□□ -0.58
LINC00343-211ENST00000608426 ELOAQ14241 798 aaKnown RBP11.45□□□□□ -0.58
LINC00343-211ENST00000608426 DYRK1BQ9Y463 629 aa11.45□□□□□ -0.58
LINC00343-211ENST00000608426 NPAS3Q8IXF0 933 aa11.44□□□□□ -0.58
LINC00343-211ENST00000608426 SLC16A10Q8TF71 515 aa11.44□□□□□ -0.58
LINC00343-211ENST00000608426 STK32AQ8WU08 396 aa11.44□□□□□ -0.58
LINC00343-211ENST00000608426 H3BM21 787 aa11.43□□□□□ -0.58
LINC00343-211ENST00000608426 ITGA6P23229 1130 aa11.43□□□□□ -0.58
LINC00343-211ENST00000608426 RIPOR1Q6ZS17 1223 aa11.43□□□□□ -0.58
LINC00343-211ENST00000608426 AIDAQ96BJ3 306 aa11.43□□□□□ -0.58
LINC00343-211ENST00000608426 PARP3Q9Y6F1 533 aa11.43□□□□□ -0.58
LINC00343-211ENST00000608426 A0A1B0GTH6 734 aa11.42□□□□□ -0.58
LINC00343-211ENST00000608426 GPAMQ9HCL2 828 aa11.42□□□□□ -0.58
LINC00343-211ENST00000608426 PPP1R12BO60237 982 aaPredicted RBP11.41□□□□□ -0.58
LINC00343-211ENST00000608426 ZNF295-AS1Q8N0V1 137 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms