RNA–Protein interactions for RNA: ENST00000607448.5

LINC01001-203, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 1,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-203ENST00000607448 ASAP1Q9ULH1 1129 aa14□□□□□ -0.17
LINC01001-203ENST00000607448 ADAMTS7Q9UKP4 1686 aa13.99□□□□□ -0.17
LINC01001-203ENST00000607448 PLEKHO1Q53GL0 409 aaPredicted RBP13.99□□□□□ -0.17
LINC01001-203ENST00000607448 SGIP1Q9BQI5 828 aa13.99□□□□□ -0.17
LINC01001-203ENST00000607448 TMOD3Q9NYL9 352 aa13.99□□□□□ -0.17
LINC01001-203ENST00000607448 ZNF831Q5JPB2 1677 aa13.98□□□□□ -0.17
LINC01001-203ENST00000607448 DIAPH1O60610 1272 aaKnown RBP13.98□□□□□ -0.17
LINC01001-203ENST00000607448 AMOTQ4VCS5 1084 aa13.97□□□□□ -0.17
LINC01001-203ENST00000607448 AMIGO3Q86WK7 504 aa13.97□□□□□ -0.17
LINC01001-203ENST00000607448 FAM9BQ8IZU0 186 aa13.97□□□□□ -0.17
LINC01001-203ENST00000607448 MTFR1LQ9H019 292 aa13.97□□□□□ -0.17
LINC01001-203ENST00000607448 TFCP2L1Q9NZI6 479 aa13.97□□□□□ -0.17
LINC01001-203ENST00000607448 TJP1Q07157 1748 aa13.97□□□□□ -0.17
LINC01001-203ENST00000607448 SMIM5Q71RC9 77 aa13.96□□□□□ -0.17
LINC01001-203ENST00000607448 DCAF5Q96JK2 942 aa13.96□□□□□ -0.17
LINC01001-203ENST00000607448 ATG3Q9NT62 314 aa13.96□□□□□ -0.17
LINC01001-203ENST00000607448 PPP1R1BQ9UD71 204 aaPredicted RBP13.96□□□□□ -0.17
LINC01001-203ENST00000607448 MYH14Q7Z406 1995 aaKnown RBP13.95□□□□□ -0.18
LINC01001-203ENST00000607448 SIPA1L3O60292 1781 aaPredicted RBP13.95□□□□□ -0.18
LINC01001-203ENST00000607448 LOC102724428A0A0B4J2F2 783 aa13.95□□□□□ -0.18
LINC01001-203ENST00000607448 PPP2R1AP30153 589 aa13.95□□□□□ -0.18
LINC01001-203ENST00000607448 SIK1P57059 783 aa13.95□□□□□ -0.18
LINC01001-203ENST00000607448 ITPK1Q13572 414 aa13.95□□□□□ -0.18
LINC01001-203ENST00000607448 COL23A1Q86Y22 540 aaPredicted RBP13.95□□□□□ -0.18
LINC01001-203ENST00000607448 LINC00116Q8NCU8 138 aa13.95□□□□□ -0.18
LINC01001-203ENST00000607448 SMARCC1Q92922 1105 aaPredicted RBP13.95□□□□□ -0.18
LINC01001-203ENST00000607448 SLC4A9Q96Q91 983 aa13.95□□□□□ -0.18
LINC01001-203ENST00000607448 ERVV-2B6SEH9 535 aa13.94□□□□□ -0.18
LINC01001-203ENST00000607448 U2SURPO15042 1029 aaKnown RBP13.94□□□□□ -0.18
LINC01001-203ENST00000607448 MTHFSDQ2M296 383 aaKnown RBP13.94□□□□□ -0.18
LINC01001-203ENST00000607448 C1orf141Q5JVX7 400 aa13.94□□□□□ -0.18
LINC01001-203ENST00000607448 MRC1P22897 1456 aa13.94□□□□□ -0.18
LINC01001-203ENST00000607448 CICQ96RK0 1608 aaPredicted RBP13.94□□□□□ -0.18
LINC01001-203ENST00000607448 HSP90AB1P08238 724 aaKnown RBP13.93□□□□□ -0.18
LINC01001-203ENST00000607448 LGR6Q9HBX8 967 aa13.93□□□□□ -0.18
LINC01001-203ENST00000607448 C4AP0C0L4 1744 aa13.93□□□□□ -0.18
LINC01001-203ENST00000607448 UBR2Q8IWV8 1755 aa13.93□□□□□ -0.18
LINC01001-203ENST00000607448 ATP6V1AP38606 617 aa13.92□□□□□ -0.18
LINC01001-203ENST00000607448 RALBP1Q15311 655 aa13.92□□□□□ -0.18
LINC01001-203ENST00000607448 AKAP4Q5JQC9 854 aa13.92□□□□□ -0.18
LINC01001-203ENST00000607448 NFATC2IPQ8NCF5 419 aa13.92□□□□□ -0.18
LINC01001-203ENST00000607448 PPP4R2Q9NY27 417 aa13.92□□□□□ -0.18
LINC01001-203ENST00000607448 CABP4P57796 275 aa13.92□□□□□ -0.18
LINC01001-203ENST00000607448 FHDC1Q9C0D6 1143 aaPredicted RBP13.92□□□□□ -0.18
LINC01001-203ENST00000607448 DLG5Q8TDM6 1919 aa13.91□□□□□ -0.18
LINC01001-203ENST00000607448 MSH5O43196 834 aa13.91□□□□□ -0.18
LINC01001-203ENST00000607448 RBM42Q9BTD8 480 aaKnown RBP13.91□□□□□ -0.18
LINC01001-203ENST00000607448 PHF14O94880 888 aa13.9□□□□□ -0.18
LINC01001-203ENST00000607448 MSL1Q68DK7 614 aa13.9□□□□□ -0.18
LINC01001-203ENST00000607448 SLC16A10Q8TF71 515 aa13.9□□□□□ -0.18
LINC01001-203ENST00000607448 RNMTO43148 476 aaKnown RBP13.89□□□□□ -0.19
LINC01001-203ENST00000607448 PHACTR3Q96KR7 559 aa13.89□□□□□ -0.19
LINC01001-203ENST00000607448 AK7Q96M32 723 aa13.89□□□□□ -0.19
LINC01001-203ENST00000607448 ARXQ96QS3 562 aa13.89□□□□□ -0.19
LINC01001-203ENST00000607448 SYT17Q9BSW7 474 aa13.89□□□□□ -0.19
LINC01001-203ENST00000607448 MYBBP1AQ9BQG0 1328 aaKnown RBP13.89□□□□□ -0.19
LINC01001-203ENST00000607448 KCPQ6ZWJ8 1503 aa13.89□□□□□ -0.19
LINC01001-203ENST00000607448 PTCD1O75127 700 aaKnown RBP13.88□□□□□ -0.19
LINC01001-203ENST00000607448 RSPH6AQ9H0K4 717 aa13.88□□□□□ -0.19
LINC01001-203ENST00000607448 SLC52A2Q9HAB3 445 aa13.88□□□□□ -0.19
LINC01001-203ENST00000607448 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.88□□□□□ -0.19
LINC01001-203ENST00000607448 PRKAR2BP31323 418 aa13.88□□□□□ -0.19
LINC01001-203ENST00000607448 CFAP53Q96M91 514 aa13.88□□□□□ -0.19
LINC01001-203ENST00000607448 GNPATO15228 680 aa13.87□□□□□ -0.19
LINC01001-203ENST00000607448 SLC39A6Q13433 755 aa13.87□□□□□ -0.19
LINC01001-203ENST00000607448 PNISRQ8TF01 805 aaKnown RBP13.87□□□□□ -0.19
LINC01001-203ENST00000607448 MAP3K5Q99683 1374 aa13.86□□□□□ -0.19
LINC01001-203ENST00000607448 NUDCQ9Y266 331 aa13.86□□□□□ -0.19
LINC01001-203ENST00000607448 U2AF1L5P0DN76 240 aaPredicted RBP13.85□□□□□ -0.19
LINC01001-203ENST00000607448 SSFA2P28290 1259 aa13.85□□□□□ -0.19
LINC01001-203ENST00000607448 U2AF1Q01081 240 aaKnown RBP eCLIP13.85□□□□□ -0.19
LINC01001-203ENST00000607448 KLHL34Q8N239 644 aa13.85□□□□□ -0.19
LINC01001-203ENST00000607448 RBM19Q9Y4C8 960 aaKnown RBP13.85□□□□□ -0.19
LINC01001-203ENST00000607448 POLD1P28340 1107 aa13.84□□□□□ -0.19
LINC01001-203ENST00000607448 IL17REQ8NFR9 667 aa13.84□□□□□ -0.19
LINC01001-203ENST00000607448 FLAD1Q8NFF5 587 aa13.83□□□□□ -0.19
LINC01001-203ENST00000607448 NLGN2Q8NFZ4 835 aa13.83□□□□□ -0.19
LINC01001-203ENST00000607448 RNF123Q5XPI4 1314 aa13.83□□□□□ -0.19
LINC01001-203ENST00000607448 CNTNAP4Q9C0A0 1308 aa13.83□□□□□ -0.2
LINC01001-203ENST00000607448 GNAT3A8MTJ3 354 aa13.83□□□□□ -0.2
LINC01001-203ENST00000607448 GAS2L2Q8NHY3 880 aa13.83□□□□□ -0.2
LINC01001-203ENST00000607448 KIAA1551Q9HCM1 1747 aa13.82□□□□□ -0.2
LINC01001-203ENST00000607448 CEMIPQ8WUJ3 1361 aa13.82□□□□□ -0.2
LINC01001-203ENST00000607448 DNAJC10Q8IXB1 793 aa13.82□□□□□ -0.2
LINC01001-203ENST00000607448 CHD4Q14839 1912 aa13.82□□□□□ -0.2
LINC01001-203ENST00000607448 KIF13BQ9NQT8 1826 aa13.82□□□□□ -0.2
LINC01001-203ENST00000607448 CRKLP46109 303 aaKnown RBP13.81□□□□□ -0.2
LINC01001-203ENST00000607448 IRX6P78412 446 aaPredicted RBP13.81□□□□□ -0.2
LINC01001-203ENST00000607448 N4BP2Q86UW6 1770 aaPredicted RBP13.8□□□□□ -0.2
LINC01001-203ENST00000607448 FCHSD2O94868 740 aa13.8□□□□□ -0.2
LINC01001-203ENST00000607448 HMGB2P26583 209 aaKnown RBP13.8□□□□□ -0.2
LINC01001-203ENST00000607448 RC3H1Q5TC82 1133 aaKnown RBP13.8□□□□□ -0.2
LINC01001-203ENST00000607448 ARHGEF1Q92888 912 aaKnown RBP13.8□□□□□ -0.2
LINC01001-203ENST00000607448 RTCBQ9Y3I0 505 aaKnown RBP13.8□□□□□ -0.2
LINC01001-203ENST00000607448 RPS6KA4O75676 772 aa13.79□□□□□ -0.2
LINC01001-203ENST00000607448 INTS5Q6P9B9 1019 aaKnown RBP13.79□□□□□ -0.2
LINC01001-203ENST00000607448 MCM10Q7L590 875 aa13.79□□□□□ -0.2
LINC01001-203ENST00000607448 KDM3BQ7LBC6 1761 aa13.79□□□□□ -0.2
LINC01001-203ENST00000607448 DCTN1Q14203 1278 aa13.79□□□□□ -0.2
LINC01001-203ENST00000607448 TRAPPC3LQ5T215 181 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms