RNA–Protein interactions for RNA: ENST00000606885.1

AP002856.2-202, humanhuman

TSL 1 (best) BASIC

Gene AP002856.2, Length 755 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002856.2-202ENST00000606885 BRCA1P38398 1863 aaKnown RBP13.08□□□□□ -0.32
AP002856.2-202ENST00000606885 MMP10P09238 476 aa13.08□□□□□ -0.32
AP002856.2-202ENST00000606885 SPDYE1Q8NFV5 336 aaPredicted RBP13.08□□□□□ -0.32
AP002856.2-202ENST00000606885 PIM2Q9P1W9 311 aa13.08□□□□□ -0.32
AP002856.2-202ENST00000606885 TAF1LQ8IZX4 1826 aa13.07□□□□□ -0.32
AP002856.2-202ENST00000606885 CHADLQ6NUI6 762 aa13.07□□□□□ -0.32
AP002856.2-202ENST00000606885 PHF14O94880 888 aa13.06□□□□□ -0.32
AP002856.2-202ENST00000606885 DALRD3Q5D0E6 543 aaKnown RBP13.06□□□□□ -0.32
AP002856.2-202ENST00000606885 GCC1Q96CN9 775 aa13.06□□□□□ -0.32
AP002856.2-202ENST00000606885 DOT1LQ8TEK3 1739 aa13.05□□□□□ -0.32
AP002856.2-202ENST00000606885 SOX12O15370 315 aa13.05□□□□□ -0.32
AP002856.2-202ENST00000606885 CCDC87Q9NVE4 849 aa13.05□□□□□ -0.32
AP002856.2-202ENST00000606885 UBR3Q6ZT12 1888 aa13.05□□□□□ -0.32
AP002856.2-202ENST00000606885 TMEM88BA6NKF7 163 aa13.04□□□□□ -0.32
AP002856.2-202ENST00000606885 KCNA3P22001 575 aa13.04□□□□□ -0.32
AP002856.2-202ENST00000606885 SMIM5Q71RC9 77 aa13.04□□□□□ -0.32
AP002856.2-202ENST00000606885 BEGAINQ9BUH8 593 aa13.04□□□□□ -0.32
AP002856.2-202ENST00000606885 C4BP0C0L5 1744 aa13.04□□□□□ -0.32
AP002856.2-202ENST00000606885 SRPK2P78362 688 aaKnown RBP13.03□□□□□ -0.32
AP002856.2-202ENST00000606885 DPY19L2Q6NUT2 758 aa13.03□□□□□ -0.32
AP002856.2-202ENST00000606885 AMIGO3Q86WK7 504 aa13.03□□□□□ -0.32
AP002856.2-202ENST00000606885 NLGN1Q8N2Q7 840 aa13.03□□□□□ -0.32
AP002856.2-202ENST00000606885 POTECB2RU33 542 aa13.02□□□□□ -0.33
AP002856.2-202ENST00000606885 LMNB1P20700 586 aa13.02□□□□□ -0.33
AP002856.2-202ENST00000606885 KDM6AO15550 1401 aaPredicted RBP13.02□□□□□ -0.33
AP002856.2-202ENST00000606885 NFAT5O94916 1531 aa13.02□□□□□ -0.33
AP002856.2-202ENST00000606885 ANKRD24Q8TF21 1146 aa13.01□□□□□ -0.33
AP002856.2-202ENST00000606885 MCOLN1Q9GZU1 580 aa13.01□□□□□ -0.33
AP002856.2-202ENST00000606885 PASKQ96RG2 1323 aa13.01□□□□□ -0.33
AP002856.2-202ENST00000606885 TOGARAM1Q9Y4F4 1720 aa13.01□□□□□ -0.33
AP002856.2-202ENST00000606885 PALLDQ8WX93 1383 aa13□□□□□ -0.33
AP002856.2-202ENST00000606885 LOC105371045A0A1W2PR82 267 aa13□□□□□ -0.33
AP002856.2-202ENST00000606885 DEFB115Q30KQ5 88 aa13□□□□□ -0.33
AP002856.2-202ENST00000606885 SMARCC1Q92922 1105 aaPredicted RBP13□□□□□ -0.33
AP002856.2-202ENST00000606885 STAC3Q96MF2 364 aa13□□□□□ -0.33
AP002856.2-202ENST00000606885 CABP1Q9NZU7 370 aa13□□□□□ -0.33
AP002856.2-202ENST00000606885 TTC21AQ8NDW8 1320 aa12.99□□□□□ -0.33
AP002856.2-202ENST00000606885 RASSF10A6NK89 507 aa12.99□□□□□ -0.33
AP002856.2-202ENST00000606885 PITPNM1O00562 1244 aa12.99□□□□□ -0.33
AP002856.2-202ENST00000606885 TMF1P82094 1093 aa12.99□□□□□ -0.33
AP002856.2-202ENST00000606885 ZCRB1Q8TBF4 217 aaKnown RBP12.99□□□□□ -0.33
AP002856.2-202ENST00000606885 WDR33Q9C0J8 1336 aaKnown RBP12.98□□□□□ -0.33
AP002856.2-202ENST00000606885 CLEC11AQ9Y240 323 aa12.98□□□□□ -0.33
AP002856.2-202ENST00000606885 TTC21BQ7Z4L5 1316 aa12.97□□□□□ -0.33
AP002856.2-202ENST00000606885 MPHOSPH9Q99550 1183 aa12.97□□□□□ -0.33
AP002856.2-202ENST00000606885 PARP3Q9Y6F1 533 aa12.97□□□□□ -0.33
AP002856.2-202ENST00000606885 LDHDQ86WU2 507 aa12.95□□□□□ -0.34
AP002856.2-202ENST00000606885 IFNLR1Q8IU57 520 aaPredicted RBP12.95□□□□□ -0.34
AP002856.2-202ENST00000606885 CABP2Q9NPB3 220 aa12.95□□□□□ -0.34
AP002856.2-202ENST00000606885 GNPATO15228 680 aa12.94□□□□□ -0.34
AP002856.2-202ENST00000606885 CA12O43570 354 aa12.94□□□□□ -0.34
AP002856.2-202ENST00000606885 RASSF7Q02833 373 aa12.94□□□□□ -0.34
AP002856.2-202ENST00000606885 C4AP0C0L4 1744 aa12.93□□□□□ -0.34
AP002856.2-202ENST00000606885 DLL1O00548 723 aa12.93□□□□□ -0.34
AP002856.2-202ENST00000606885 DGKZQ13574 1117 aa12.93□□□□□ -0.34
AP002856.2-202ENST00000606885 ITGBL1O95965 494 aaPredicted RBP12.92□□□□□ -0.34
AP002856.2-202ENST00000606885 ECE1P42892 770 aa12.92□□□□□ -0.34
AP002856.2-202ENST00000606885 HABP4Q5JVS0 413 aaKnown RBP12.92□□□□□ -0.34
AP002856.2-202ENST00000606885 TRAPPC3LQ5T215 181 aa12.92□□□□□ -0.34
AP002856.2-202ENST00000606885 MPRIPQ6WCQ1 1025 aa12.92□□□□□ -0.34
AP002856.2-202ENST00000606885 KDM2AQ9Y2K7 1162 aa12.92□□□□□ -0.34
AP002856.2-202ENST00000606885 CGNL1Q0VF96 1302 aa12.91□□□□□ -0.34
AP002856.2-202ENST00000606885 POTEIP0CG38 1075 aa12.91□□□□□ -0.34
AP002856.2-202ENST00000606885 POTEJP0CG39 1038 aa12.91□□□□□ -0.34
AP002856.2-202ENST00000606885 NBPF15Q8N660 670 aa12.91□□□□□ -0.34
AP002856.2-202ENST00000606885 LINC00116Q8NCU8 138 aa12.91□□□□□ -0.34
AP002856.2-202ENST00000606885 FAM208AQ9UK61 1670 aaKnown RBP12.91□□□□□ -0.34
AP002856.2-202ENST00000606885 CCDC88AQ3V6T2 1871 aa12.91□□□□□ -0.34
AP002856.2-202ENST00000606885 TIAM2Q8IVF5 1701 aa12.91□□□□□ -0.34
AP002856.2-202ENST00000606885 CASP8AP2Q9UKL3 1982 aa12.9□□□□□ -0.34
AP002856.2-202ENST00000606885 LOC102724428A0A0B4J2F2 783 aa12.9□□□□□ -0.34
AP002856.2-202ENST00000606885 IQCA1LA6NCM1 817 aa12.9□□□□□ -0.34
AP002856.2-202ENST00000606885 PRR29P0C7W0 189 aa12.9□□□□□ -0.34
AP002856.2-202ENST00000606885 SIK1P57059 783 aa12.9□□□□□ -0.34
AP002856.2-202ENST00000606885 MIER1Q8N108 512 aa12.9□□□□□ -0.34
AP002856.2-202ENST00000606885 DCAF11Q8TEB1 546 aa12.9□□□□□ -0.34
AP002856.2-202ENST00000606885 A0A0C4DFX4 3053 aa12.9□□□□□ -0.34
AP002856.2-202ENST00000606885 LTN1O94822 1766 aa12.89□□□□□ -0.35
AP002856.2-202ENST00000606885 SOX10P56693 466 aa12.89□□□□□ -0.35
AP002856.2-202ENST00000606885 PLCD3Q8N3E9 789 aa12.89□□□□□ -0.35
AP002856.2-202ENST00000606885 ABT1Q9ULW3 272 aaKnown RBP12.89□□□□□ -0.35
AP002856.2-202ENST00000606885 RTCBQ9Y3I0 505 aaKnown RBP12.89□□□□□ -0.35
AP002856.2-202ENST00000606885 GYS1P13807 737 aa12.88□□□□□ -0.35
AP002856.2-202ENST00000606885 GPR101Q96P66 508 aaPredicted RBP12.88□□□□□ -0.35
AP002856.2-202ENST00000606885 USP31Q70CQ4 1352 aa12.88□□□□□ -0.35
AP002856.2-202ENST00000606885 CHRNA5P30532 468 aa12.87□□□□□ -0.35
AP002856.2-202ENST00000606885 MAP2K2P36507 400 aa12.87□□□□□ -0.35
AP002856.2-202ENST00000606885 IP6K1Q92551 441 aa12.87□□□□□ -0.35
AP002856.2-202ENST00000606885 CAPNS2Q96L46 248 aa12.87□□□□□ -0.35
AP002856.2-202ENST00000606885 THSD7BQ9C0I4 1608 aa12.87□□□□□ -0.35
AP002856.2-202ENST00000606885 RFC4P35249 363 aa12.86□□□□□ -0.35
AP002856.2-202ENST00000606885 ERFEQ4G0M1 354 aa12.86□□□□□ -0.35
AP002856.2-202ENST00000606885 AMER1Q5JTC6 1135 aaPredicted RBP12.85□□□□□ -0.35
AP002856.2-202ENST00000606885 ARHGEF1Q92888 912 aaKnown RBP12.85□□□□□ -0.35
AP002856.2-202ENST00000606885 TSKSQ9UJT2 592 aa12.85□□□□□ -0.35
AP002856.2-202ENST00000606885 DICER1Q9UPY3 1922 aaKnown RBP12.85□□□□□ -0.35
AP002856.2-202ENST00000606885 MAP2P11137 1827 aaKnown RBP12.85□□□□□ -0.35
AP002856.2-202ENST00000606885 CENPJQ9HC77 1338 aaPredicted RBP12.85□□□□□ -0.35
AP002856.2-202ENST00000606885 SCN4AP35499 1836 aa12.84□□□□□ -0.35
AP002856.2-202ENST00000606885 ATP6V1AP38606 617 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms