RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 ADAMTSL3P82987 1691 aa19.8■□□□□ 0.76
CTSA-214ENST00000606788 PNMA6EA0A0J9YXQ4 647 aa19.79■□□□□ 0.76
CTSA-214ENST00000606788 PLEKHM2Q8IWE5 1019 aa19.79■□□□□ 0.76
CTSA-214ENST00000606788 LRRFIP2Q9Y608 721 aaKnown RBP19.79■□□□□ 0.76
CTSA-214ENST00000606788 AIMP1Q12904 312 aaKnown RBP19.78■□□□□ 0.76
CTSA-214ENST00000606788 PLEKHO1Q53GL0 409 aaPredicted RBP19.78■□□□□ 0.76
CTSA-214ENST00000606788 MARF1Q9Y4F3 1742 aaKnown RBP19.78■□□□□ 0.76
CTSA-214ENST00000606788 LTN1O94822 1766 aa19.78■□□□□ 0.76
CTSA-214ENST00000606788 ATP10DQ9P241 1426 aa19.77■□□□□ 0.76
CTSA-214ENST00000606788 RGPD2P0DJD1 1756 aa19.77■□□□□ 0.75
CTSA-214ENST00000606788 PROSER3Q2NL68 480 aa19.77■□□□□ 0.75
CTSA-214ENST00000606788 EIF4A1P60842 406 aaKnown RBP19.76■□□□□ 0.75
CTSA-214ENST00000606788 BMP2KLQ5H9B9 411 aa19.76■□□□□ 0.75
CTSA-214ENST00000606788 IL1RAPL2Q9NP60 686 aa19.76■□□□□ 0.75
CTSA-214ENST00000606788 PI4KAP2A4QPH2 592 aa19.76■□□□□ 0.75
CTSA-214ENST00000606788 PI4KAP1Q8N8J0 262 aa19.76■□□□□ 0.75
CTSA-214ENST00000606788 GNAI2P04899 355 aa19.75■□□□□ 0.75
CTSA-214ENST00000606788 CCT4P50991 539 aaKnown RBP19.75■□□□□ 0.75
CTSA-214ENST00000606788 RPAP2Q8IXW5 612 aaPredicted RBP19.75■□□□□ 0.75
CTSA-214ENST00000606788 C1orf167Q5SNV9 1468 aa19.75■□□□□ 0.75
CTSA-214ENST00000606788 HTATSF1O43719 755 aaKnown RBP19.75■□□□□ 0.75
CTSA-214ENST00000606788 PXDNQ92626 1479 aa19.75■□□□□ 0.75
CTSA-214ENST00000606788 ARXQ96QS3 562 aa19.74■□□□□ 0.75
CTSA-214ENST00000606788 RNMTO43148 476 aaKnown RBP19.73■□□□□ 0.75
CTSA-214ENST00000606788 NFAT5O94916 1531 aa19.73■□□□□ 0.75
CTSA-214ENST00000606788 AKAP4Q5JQC9 854 aa19.73■□□□□ 0.75
CTSA-214ENST00000606788 RAPGEF4Q8WZA2 1011 aa19.73■□□□□ 0.75
CTSA-214ENST00000606788 NBPF7P0C2Y1 421 aaPredicted RBP19.72■□□□□ 0.75
CTSA-214ENST00000606788 UBTFL1P0CB47 393 aaPredicted RBP19.72■□□□□ 0.75
CTSA-214ENST00000606788 USP44Q9H0E7 712 aa19.72■□□□□ 0.75
CTSA-214ENST00000606788 VIRMAQ69YN4 1812 aaKnown RBP19.71■□□□□ 0.75
CTSA-214ENST00000606788 MAP4K4O95819 1239 aaPredicted RBP19.71■□□□□ 0.75
CTSA-214ENST00000606788 MYL6BP14649 208 aa19.71■□□□□ 0.75
CTSA-214ENST00000606788 CD2BP2O95400 341 aaKnown RBP19.71■□□□□ 0.75
CTSA-214ENST00000606788 USP35Q9P2H5 1018 aa19.71■□□□□ 0.75
CTSA-214ENST00000606788 SDSP20132 328 aa19.7■□□□□ 0.74
CTSA-214ENST00000606788 KIF24Q5T7B8 1368 aa19.7■□□□□ 0.74
CTSA-214ENST00000606788 HMMRO75330 724 aa19.7■□□□□ 0.74
CTSA-214ENST00000606788 TTC22Q5TAA0 569 aa19.7■□□□□ 0.74
CTSA-214ENST00000606788 NFATC2IPQ8NCF5 419 aa19.7■□□□□ 0.74
CTSA-214ENST00000606788 JARID2Q92833 1246 aaPredicted RBP19.7■□□□□ 0.74
CTSA-214ENST00000606788 ERBB3P21860 1342 aa19.7■□□□□ 0.74
CTSA-214ENST00000606788 ZNF142P52746 1687 aaPredicted RBP19.69■□□□□ 0.74
CTSA-214ENST00000606788 CDC45O75419 566 aa19.69■□□□□ 0.74
CTSA-214ENST00000606788 CWF19L2Q2TBE0 894 aaKnown RBP19.69■□□□□ 0.74
CTSA-214ENST00000606788 NUTM1Q86Y26 1132 aa19.69■□□□□ 0.74
CTSA-214ENST00000606788 HSCBQ8IWL3 235 aa19.68■□□□□ 0.74
CTSA-214ENST00000606788 SRCIN1Q9C0H9 1055 aa19.68■□□□□ 0.74
CTSA-214ENST00000606788 RILPL2Q969X0 211 aa19.68■□□□□ 0.74
CTSA-214ENST00000606788 TRIM6-TRIM34B2RNG4 842 aa19.67■□□□□ 0.74
CTSA-214ENST00000606788 SURF6O75683 361 aaKnown RBP19.67■□□□□ 0.74
CTSA-214ENST00000606788 CEMIPQ8WUJ3 1361 aa19.67■□□□□ 0.74
CTSA-214ENST00000606788 HSP90AA1P07900 732 aaKnown RBP19.66■□□□□ 0.74
CTSA-214ENST00000606788 GNAI3P08754 354 aa19.66■□□□□ 0.74
CTSA-214ENST00000606788 PPP1R42Q7Z4L9 355 aa19.66■□□□□ 0.74
CTSA-214ENST00000606788 ZNF335Q9H4Z2 1342 aaPredicted RBP19.66■□□□□ 0.74
CTSA-214ENST00000606788 AMOTQ4VCS5 1084 aa19.66■□□□□ 0.74
CTSA-214ENST00000606788 MAP3K2Q9Y2U5 619 aa19.66■□□□□ 0.74
CTSA-214ENST00000606788 SRGAP3O43295 1099 aa19.65■□□□□ 0.74
CTSA-214ENST00000606788 DNAAF4Q8WXU2 420 aa19.65■□□□□ 0.74
CTSA-214ENST00000606788 STRN4Q9NRL3 753 aa19.65■□□□□ 0.74
CTSA-214ENST00000606788 HSP90AB1P08238 724 aaKnown RBP19.65■□□□□ 0.74
CTSA-214ENST00000606788 CADPS2Q86UW7 1296 aa19.64■□□□□ 0.73
CTSA-214ENST00000606788 GIGYF1O75420 1035 aaPredicted RBP19.64■□□□□ 0.73
CTSA-214ENST00000606788 TATP17735 454 aaPredicted RBP19.64■□□□□ 0.73
CTSA-214ENST00000606788 PDE1AP54750 535 aa19.64■□□□□ 0.73
CTSA-214ENST00000606788 LRRCC1Q9C099 1032 aa19.64■□□□□ 0.73
CTSA-214ENST00000606788 ATP8B2P98198 1209 aa19.63■□□□□ 0.73
CTSA-214ENST00000606788 KIF2CQ99661 725 aa19.63■□□□□ 0.73
CTSA-214ENST00000606788 MST1RQ04912 1400 aa19.63■□□□□ 0.73
CTSA-214ENST00000606788 OS9Q13438 667 aaPredicted RBP19.62■□□□□ 0.73
CTSA-214ENST00000606788 C9orf78Q9NZ63 289 aaPredicted RBP19.62■□□□□ 0.73
CTSA-214ENST00000606788 PRDM11Q9NQV5 511 aa19.62■□□□□ 0.73
CTSA-214ENST00000606788 PA2G4Q9UQ80 394 aaKnown RBP19.62■□□□□ 0.73
CTSA-214ENST00000606788 ANTXR1Q9H6X2 564 aa19.62■□□□□ 0.73
CTSA-214ENST00000606788 RGPD5Q99666 1765 aa19.62■□□□□ 0.73
CTSA-214ENST00000606788 NPHP3Q7Z494 1330 aa19.61■□□□□ 0.73
CTSA-214ENST00000606788 NOL8Q76FK4 1167 aaKnown RBP19.61■□□□□ 0.73
CTSA-214ENST00000606788 UNC5CLQ8IV45 518 aa19.61■□□□□ 0.73
CTSA-214ENST00000606788 GZF1Q9H116 711 aaPredicted RBP19.61■□□□□ 0.73
CTSA-214ENST00000606788 BRINP3Q76B58 766 aa19.6■□□□□ 0.73
CTSA-214ENST00000606788 BEND3Q5T5X7 828 aa19.6■□□□□ 0.73
CTSA-214ENST00000606788 DDX54Q8TDD1 881 aaKnown RBP19.6■□□□□ 0.73
CTSA-214ENST00000606788 ZNF496Q96IT1 587 aaPredicted RBP19.6■□□□□ 0.73
CTSA-214ENST00000606788 DBF4Q9UBU7 674 aaPredicted RBP19.6■□□□□ 0.73
CTSA-214ENST00000606788 RBM25P49756 843 aaKnown RBP19.6■□□□□ 0.73
CTSA-214ENST00000606788 TOM1L2Q6ZVM7 507 aa19.6■□□□□ 0.73
CTSA-214ENST00000606788 CYP27B1O15528 508 aa19.59■□□□□ 0.73
CTSA-214ENST00000606788 SOS1Q07889 1333 aaPredicted RBP19.59■□□□□ 0.73
CTSA-214ENST00000606788 MX1P20591 662 aa19.59■□□□□ 0.73
CTSA-214ENST00000606788 USP16Q9Y5T5 823 aa19.59■□□□□ 0.73
CTSA-214ENST00000606788 ZNF790Q6PG37 636 aa19.58■□□□□ 0.73
CTSA-214ENST00000606788 SIL1Q9H173 461 aa19.58■□□□□ 0.72
CTSA-214ENST00000606788 ZNF330Q9Y3S2 320 aaPredicted RBP19.58■□□□□ 0.72
CTSA-214ENST00000606788 ADCY9O60503 1353 aa19.58■□□□□ 0.72
CTSA-214ENST00000606788 PHKG2P15735 406 aa19.57■□□□□ 0.72
CTSA-214ENST00000606788 KLHDC4Q8TBB5 520 aa19.57■□□□□ 0.72
CTSA-214ENST00000606788 MED1Q15648 1581 aaPredicted RBP19.57■□□□□ 0.72
CTSA-214ENST00000606788 RIC3Q7Z5B4 369 aa19.57■□□□□ 0.72
CTSA-214ENST00000606788 MEGF6O75095 1541 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms